CuGenDBv2

Gene ID	Pay0001490
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Genome location	chr08:14697434..14698039
RNA-Seq Expression	Pay0001490
Synteny	Pay0001490
Gene Ontology terms	NA
InterPro domains	IPR021109 - Aspartic peptidase domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]

1.6e-46

62.57

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        + KK RIND +T+AL   TSDI KNG  +KMT   SF VPCSI+ MDLGHVLCDLGASINLMPLSIFKKL+I+EVQP HM  Q  DRSI    GKIED+L
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHAL----------------IDFNVLKAMKFPTNDKN
        VKVDKFLF ADFIILDYEA++EV II  + FLST  AL                I FNV+ AMKFP +D++
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHAL----------------IDFNVLKAMKFPTNDKN

KAA0067858.1 uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa]

4.0e-77

85.96

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        M KKGR NDCETVALTLETSDILKNGAPKKMTD RSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHM LQFVDRSIAKH GKIEDIL
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID---------------FNVLKAMKFPTNDKNYSMIESLG
        VKVDKFLFHADFIILDYEANQEVPIIFG+PFLST HALID               FNV+ AMKFPT+DKNYSMIESLG
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID---------------FNVLKAMKFPTNDKNYSMIESLG

TYK11062.1 uncharacterized protein E5676_scaffold73G00470 [Cucumis melo var. makuwa]

3.6e-70

97.14

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        M KKGRINDCE  ALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHM LQFVDRSIAKHGGKIEDIL
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID
        VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID

XP_008447648.1 PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo]

3.0e-48

62.36

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        + KK RIND +T+AL   TSDI KNG  +KMT   SF VPCSI+ MDLGHVLCDLGASINLMPLSIFKKL+I+EVQP HM  Q  DRSI    GKIED+L
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHAL----------------IDFNVLKAMKFPTNDKNYSMIESL
        VKVDKFLF ADFIILDYEA++EV II  + FLST  AL                I FNV+ AMKFP +D++ + IESL
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHAL----------------IDFNVLKAMKFPTNDKNYSMIESL

XP_008465121.1 PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo]

1.2e-89

87.06

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        M KKGR NDCETVALTLETSDILKNGAPKKMTD RSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHM LQFVDRSIAKH GKIEDIL
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID---------------FNVLKAMKFPTNDKNYSMIESLGGTILRKKYMKNCSALKNSLKTR
        VKVDKFLFHADFIILDYEANQEVPIIFG+PFLST HALID               FNV+ AMKFPT+DKNYSMIESLGGTILRKKY+KNCSALKNSLKTR
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID---------------FNVLKAMKFPTNDKNYSMIESLGGTILRKKYMKNCSALKNSLKTR

Query:  T
        T
Subjt:  T

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHX3 uncharacterized protein LOC103490055

1.4e-48

62.36

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        + KK RIND +T+AL   TSDI KNG  +KMT   SF VPCSI+ MDLGHVLCDLGASINLMPLSIFKKL+I+EVQP HM  Q  DRSI    GKIED+L
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHAL----------------IDFNVLKAMKFPTNDKNYSMIESL
        VKVDKFLF ADFIILDYEA++EV II  + FLST  AL                I FNV+ AMKFP +D++ + IESL
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHAL----------------IDFNVLKAMKFPTNDKNYSMIESL

A0A1S3CN55 uncharacterized protein LOC103502805

5.8e-90

87.06

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        M KKGR NDCETVALTLETSDILKNGAPKKMTD RSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHM LQFVDRSIAKH GKIEDIL
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID---------------FNVLKAMKFPTNDKNYSMIESLGGTILRKKYMKNCSALKNSLKTR
        VKVDKFLFHADFIILDYEANQEVPIIFG+PFLST HALID               FNV+ AMKFPT+DKNYSMIESLGGTILRKKY+KNCSALKNSLKTR
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID---------------FNVLKAMKFPTNDKNYSMIESLGGTILRKKYMKNCSALKNSLKTR

Query:  T
        T
Subjt:  T

A0A5A7VJ95 Uncharacterized protein

1.9e-77

85.96

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        M KKGR NDCETVALTLETSDILKNGAPKKMTD RSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHM LQFVDRSIAKH GKIEDIL
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID---------------FNVLKAMKFPTNDKNYSMIESLG
        VKVDKFLFHADFIILDYEANQEVPIIFG+PFLST HALID               FNV+ AMKFPT+DKNYSMIESLG
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID---------------FNVLKAMKFPTNDKNYSMIESLG

A0A5D3BDT2 RT_RNaseH domain-containing protein

7.9e-47

62.57

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        + KK RIND +T+AL   TSDI KNG  +KMT   SF VPCSI+ MDLGHVLCDLGASINLMPLSIFKKL+I+EVQP HM  Q  DRSI    GKIED+L
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHAL----------------IDFNVLKAMKFPTNDKN
        VKVDKFLF ADFIILDYEA++EV II  + FLST  AL                I FNV+ AMKFP +D++
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHAL----------------IDFNVLKAMKFPTNDKN

A0A5D3CID6 Uncharacterized protein

1.7e-70

97.14

Show/hide

Query:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL
        M KKGRINDCE  ALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHM LQFVDRSIAKHGGKIEDIL
Subjt:  MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDIL

Query:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID
        VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID
Subjt:  VKVDKFLFHADFIILDYEANQEVPIIFGQPFLSTDHALID

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAAAGAAAGGAAGGATTAATGATTGTGAGACAGTGGCTCTAACACTGGAGACAAGCGACATCTTAAAAAATGGGGCACCGAAAAAGATGACAGACCGTAGAAGCTT
TACAGTACCTTGCTCAATAAACAACATGGATCTTGGTCATGTGCTATGCGACCTTGGGGCGAGCATCAATTTGATGCCTCTTTCTATCTTCAAGAAATTAGAGATAGAGG
AGGTTCAACCAATGCACATGAGTCTCCAATTTGTTGACAGATCCATCGCCAAACATGGGGGAAAAATTGAAGACATTTTGGTAAAGGTGGACAAATTTTTATTTCATGCA
GACTTCATCATTCTTGACTATGAAGCTAATCAGGAGGTGCCAATCATCTTTGGGCAGCCATTCTTGTCAACTGATCATGCCCTCATAGACTTCAACGTTTTGAAGGCTAT
GAAGTTCCCCACTAATGATAAAAACTATAGCATGATAGAGTCTTTGGGTGGGACTATTTTGAGGAAGAAGTATATGAAGAACTGTTCAGCTTTAAAAAATTCTTTGAAGA
CGAGAACCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEKKGRINDCETVALTLETSDILKNGAPKKMTDRRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMSLQFVDRSIAKHGGKIEDILVKVDKFLFHA
DFIILDYEANQEVPIIFGQPFLSTDHALIDFNVLKAMKFPTNDKNYSMIESLGGTILRKKYMKNCSALKNSLKTRT

Pay0001490 (gene) of Melon (Payzawat) v1 genome