| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042995.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 8.2e-146 | 43.18 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
MI V+GVSI KPEV WTD +EQASVGNARALN IFNGVDLNVFKLIN CSTAKEAWKTLEVAYEGTSK DESVSDYNK VL
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
Query: EIVNESLMLGEKIPNSKIVWKEAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLIKQFSNVVKKFKNLNTIG
EI NESL+L I +EAHDITTLKLDELFGSLLTFEM A+RESKK KGI+FKSTHV+E+A DTE NM+E + +G
Subjt: EIVNESLMLGEKIPNSKIVWKEAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLIKQFSNVVKKFKNLNTIG
Query: SNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDS
+ + RK +N ++ +E+ D+ D + ++NAFT+ ++ ++ D+SECS + + + E+L+ LWKED
Subjt: SNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDS
Query: EARTLKSIKMLNSRTE------NLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCY
EAR ++ ++ + E NLD +L +G NG ++YGLGF A A T+EIKFVPAS+ + DT+ + K+ C+Y G+KGHIR CY
Subjt: EARTLKSIKMLNSRTE------NLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCY
Query: KLRR-----------------------------------------------------------------------------------------------D
KL+R D
Subjt: KLRR-----------------------------------------------------------------------------------------------D
Query: ILYVDGLKANLISVSQLYNY-----------VVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNI
+ YVDGLKANLI++SQL + VV+NK+NQI M+G QA+NCYHW N S+ C L + DQT LWH KLGH+ ++ ++K +K V+G+PN+
Subjt: ILYVDGLKANLISVSQLYNY-----------VVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNI
Query: NVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQREKGVKIVRIR
+VN C DC KQ +++HKSLKEC TNRVLELLHMDL G +QT+SLGGK DT ++C +LCL LQRE+ KI RIR
Subjt: NVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQREKGVKIVRIR
Query: SNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAK
S+HGKEF N N+FC EG HHE+SAPIT NGVVE KNKTL +MA+VM+HAK
Subjt: SNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAK
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| KAA0045252.1 gag-proteinase polyprotein [Cucumis melo var. makuwa] | 1.1e-163 | 68.74 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
MI V+GVS+LKPEV TD +EQAS+GNARALN IFNGVDLNVFKLINSCSTAKEA KTLEVAYEGTSK DE VSDYNKRVL
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
Query: EIVNESLMLGEKIPNSKIVWK-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLI
EI NESLML EKIP+SKIV K EAHDITTLKLDELFGSLLTFEMA DRESKK KGI+FK THVSE+AVSDT+ NMNESIDLLI
Subjt: EIVNESLMLGEKIPNSKIVWK-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLI
Query: KQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYE---------------------------DTGDGEE
KQFSNV+KKFKNLNT GSNA N+INYQRKDGENNTRR NENSNRRNSDYGRKKE EGRVFRCRE E DTGDGEE
Subjt: KQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYE---------------------------DTGDGEE
Query: AKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDSEAR-------------------------------------TLKSIKMLNSRTENLD
SMNAFTVC+SETDSGDESECS QICDKNFTFEEL+VLWKED EAR TLKS+KMLNS TENLD
Subjt: AKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDSEAR-------------------------------------TLKSIKMLNSRTENLD
Query: VMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCYKLRRDILY
V+LNSGQNGLN++GLGFD ARK+NTTTEI FVPASVNDKTDTV TKVVSPSAKTTKWICHY GQK HIRPFCYKL RDILY
Subjt: VMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCYKLRRDILY
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| KAA0046862.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.0e-143 | 54.97 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSKDESVSDYNKRVLEIVNESLMLGEKIPNSKIVW
MI V+ V +LKPEV WT+AKEQASVGNARALN+IFNGVDLNVFK+ ++DES+SDYNKRVLEI NESLMLGEKIP+SKIV
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSKDESVSDYNKRVLEIVNESLMLGEKIPNSKIVW
Query: K-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLIKQFSNVVKKFKNLNTIGSNA
K EAHDITTLKLDELFGSLLTFEM DRESKK K I+FKSTHVS++ VSDT+ NMNESIDLLIKQFSNVVKKFKNLNT GSNA
Subjt: K-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLIKQFSNVVKKFKNLNTIGSNA
Query: PNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDSEAR
N+INYQRKDGENNTRR + NR +F + E SG
Subjt: PNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDSEAR
Query: TLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCYKLRRDILYV
V G G ++++ KG+I D+ YV
Subjt: TLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCYKLRRDILYV
Query: DGLKANLISVSQLY-----------NYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVNS
DGLKANLISVSQL N VVINKDNQILMNGS QA+NCYHWI NNSEVCHLNKEDQT LWH KLGHIDLKSID+TVK +VVIGVPNI+VNS
Subjt: DGLKANLISVSQLY-----------NYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVNS
Query: KLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLIL
KLVCGDCLTEKQ KASHKSLKECSTNRVLELLHMDL G LQTESLGGKKYVFV EEDFSRFTW+RFLKDKYDTPKV ISLCLIL
Subjt: KLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLIL
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| KAA0054435.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.9e-145 | 47.28 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
MI V+GVS+ KPE+ WTDA+EQASVG ARA+N IFNGVD NVFKLIN C+TAKEAWK LEVAYEGTSK DE+VS+YNKRVL
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
Query: EIVNESLMLGEKIPNSKIVW-----------------KEAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAV--SDTEGNMNESIDL
EIVN+ L+LGEKI SKIV KEA DITTL LDELFGSLLTFEMAI+DRESKK KGI+FKS + +K V S E N +ESI L
Subjt: EIVNESLMLGEKIPNSKIVW-----------------KEAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAV--SDTEGNMNESIDL
Query: LIKQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQ
L KQFS + KKFK LNT R D EN+ R+ N++S RRNSD+G+K E G
Subjt: LIKQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQ
Query: ICDKNFTFEELKVLWKEDSEARTLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICH
+LD +L+SGQN +KYGLGFD + + T E K VP
Subjt: ICDKNFTFEELKVLWKEDSEARTLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICH
Query: YFGQKGHIRPFCYKLRRDILYVDGLKANLISVSQLYNYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDV
+DI + DG +I+ + + +K+NQ+ M+G +++NCYHW N S +CHL K DQT LWH KLGHI L+S+DK ++ +
Subjt: YFGQKGHIRPFCYKLRRDILYVDGLKANLISVSQLYNYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDV
Query: VIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQREKG
V+G+P++++N K CGDC KQ K+SH LKEC T RVLELLH+DL G +QTESLGGKKYV V +D+SRFTW+ FLK K DT K+CISLCL LQ EKG
Subjt: VIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQREKG
Query: VKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAK
KI+RIRS+H KEF N DLNNFC EGIHHE +APIT NGVVE KN+TL +MA+VM+HAK
Subjt: VKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAK
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| XP_008444307.1 PREDICTED: uncharacterized protein LOC103487675 [Cucumis melo] | 7.6e-269 | 80.92 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
MI V+GVS+LKPEV TD +EQAS+GNARALN IFNGVDLNVFKLINSCSTAKEA KTLEVAYEGTSK DE VSDYNKRVL
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
Query: EIVNESLMLGEKIPNSKIVWK-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLI
EI NESLML EKIP+SKIV K EAHDITTLKLDELFGSLLTFEMA DRESKK KGI+FK THVSE+AVSDT+ NMNESIDLLI
Subjt: EIVNESLMLGEKIPNSKIVWK-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLI
Query: KQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQIC
KQFSNV+KKFKNLNT GSNA N+INYQRKDGENNTRR NENSNRRNSDYGRKKE EGRVFRCREY+DTGDGEE SMNAFTVC+SETDSGDESECS QIC
Subjt: KQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQIC
Query: DKNFTFEELKVLWKEDSEARTLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYF
DKNFTFEEL+VLWKED EARTLKS+KMLNS TENLDV+LNSGQNGLN++GLGFD ARK+NTTTEI FVPASVNDKTDTV TKVVSPSAKTTKWICHY
Subjt: DKNFTFEELKVLWKEDSEARTLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYF
Query: GQKGHIRPFCYKLRRDILYVDGLKANLISVSQLY-----------NYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKS
GQK HIRPFCYKL RDILYVDGLKANLISVS+L N VVINKDNQILMNGS QA+NCYHWI N+SEVCHLNKEDQT LWH KLGHIDLKS
Subjt: GQKGHIRPFCYKLRRDILYVDGLKANLISVSQLY-----------NYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKS
Query: IDKTVKKDVVIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISL
ID T+K +VVIGVPNI+VNSKLVC DCLTEKQ KASHKSLKECSTNRVLELLHMDL GSLQTESLGGKKYVFVAEEDFSRFTW+RFLKDKYDTPKVCISL
Subjt: IDKTVKKDVVIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISL
Query: CLILQREK
CLILQREK
Subjt: CLILQREK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BAW0 uncharacterized protein LOC103487675 | 3.7e-269 | 80.92 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
MI V+GVS+LKPEV TD +EQAS+GNARALN IFNGVDLNVFKLINSCSTAKEA KTLEVAYEGTSK DE VSDYNKRVL
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
Query: EIVNESLMLGEKIPNSKIVWK-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLI
EI NESLML EKIP+SKIV K EAHDITTLKLDELFGSLLTFEMA DRESKK KGI+FK THVSE+AVSDT+ NMNESIDLLI
Subjt: EIVNESLMLGEKIPNSKIVWK-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLI
Query: KQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQIC
KQFSNV+KKFKNLNT GSNA N+INYQRKDGENNTRR NENSNRRNSDYGRKKE EGRVFRCREY+DTGDGEE SMNAFTVC+SETDSGDESECS QIC
Subjt: KQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQIC
Query: DKNFTFEELKVLWKEDSEARTLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYF
DKNFTFEEL+VLWKED EARTLKS+KMLNS TENLDV+LNSGQNGLN++GLGFD ARK+NTTTEI FVPASVNDKTDTV TKVVSPSAKTTKWICHY
Subjt: DKNFTFEELKVLWKEDSEARTLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYF
Query: GQKGHIRPFCYKLRRDILYVDGLKANLISVSQLY-----------NYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKS
GQK HIRPFCYKL RDILYVDGLKANLISVS+L N VVINKDNQILMNGS QA+NCYHWI N+SEVCHLNKEDQT LWH KLGHIDLKS
Subjt: GQKGHIRPFCYKLRRDILYVDGLKANLISVSQLY-----------NYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKS
Query: IDKTVKKDVVIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISL
ID T+K +VVIGVPNI+VNSKLVC DCLTEKQ KASHKSLKECSTNRVLELLHMDL GSLQTESLGGKKYVFVAEEDFSRFTW+RFLKDKYDTPKVCISL
Subjt: IDKTVKKDVVIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISL
Query: CLILQREK
CLILQREK
Subjt: CLILQREK
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| A0A5A7TNK7 Gag-pol polyprotein | 4.0e-146 | 43.18 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
MI V+GVSI KPEV WTD +EQASVGNARALN IFNGVDLNVFKLIN CSTAKEAWKTLEVAYEGTSK DESVSDYNK VL
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
Query: EIVNESLMLGEKIPNSKIVWKEAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLIKQFSNVVKKFKNLNTIG
EI NESL+L I +EAHDITTLKLDELFGSLLTFEM A+RESKK KGI+FKSTHV+E+A DTE NM+E + +G
Subjt: EIVNESLMLGEKIPNSKIVWKEAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLIKQFSNVVKKFKNLNTIG
Query: SNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDS
+ + RK +N ++ +E+ D+ D + ++NAFT+ ++ ++ D+SECS + + + E+L+ LWKED
Subjt: SNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDS
Query: EARTLKSIKMLNSRTE------NLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCY
EAR ++ ++ + E NLD +L +G NG ++YGLGF A A T+EIKFVPAS+ + DT+ + K+ C+Y G+KGHIR CY
Subjt: EARTLKSIKMLNSRTE------NLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCY
Query: KLRR-----------------------------------------------------------------------------------------------D
KL+R D
Subjt: KLRR-----------------------------------------------------------------------------------------------D
Query: ILYVDGLKANLISVSQLYNY-----------VVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNI
+ YVDGLKANLI++SQL + VV+NK+NQI M+G QA+NCYHW N S+ C L + DQT LWH KLGH+ ++ ++K +K V+G+PN+
Subjt: ILYVDGLKANLISVSQLYNY-----------VVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNI
Query: NVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQREKGVKIVRIR
+VN C DC KQ +++HKSLKEC TNRVLELLHMDL G +QT+SLGGK DT ++C +LCL LQRE+ KI RIR
Subjt: NVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQREKGVKIVRIR
Query: SNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAK
S+HGKEF N N+FC EG HHE+SAPIT NGVVE KNKTL +MA+VM+HAK
Subjt: SNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAK
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| A0A5A7TPF7 Gag-proteinase polyprotein | 5.5e-164 | 68.74 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
MI V+GVS+LKPEV TD +EQAS+GNARALN IFNGVDLNVFKLINSCSTAKEA KTLEVAYEGTSK DE VSDYNKRVL
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
Query: EIVNESLMLGEKIPNSKIVWK-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLI
EI NESLML EKIP+SKIV K EAHDITTLKLDELFGSLLTFEMA DRESKK KGI+FK THVSE+AVSDT+ NMNESIDLLI
Subjt: EIVNESLMLGEKIPNSKIVWK-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLI
Query: KQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYE---------------------------DTGDGEE
KQFSNV+KKFKNLNT GSNA N+INYQRKDGENNTRR NENSNRRNSDYGRKKE EGRVFRCRE E DTGDGEE
Subjt: KQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYE---------------------------DTGDGEE
Query: AKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDSEAR-------------------------------------TLKSIKMLNSRTENLD
SMNAFTVC+SETDSGDESECS QICDKNFTFEEL+VLWKED EAR TLKS+KMLNS TENLD
Subjt: AKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDSEAR-------------------------------------TLKSIKMLNSRTENLD
Query: VMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCYKLRRDILY
V+LNSGQNGLN++GLGFD ARK+NTTTEI FVPASVNDKTDTV TKVVSPSAKTTKWICHY GQK HIRPFCYKL RDILY
Subjt: VMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCYKLRRDILY
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| A0A5A7TTT8 Gag-pol polyprotein | 4.8e-144 | 54.97 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSKDESVSDYNKRVLEIVNESLMLGEKIPNSKIVW
MI V+ V +LKPEV WT+AKEQASVGNARALN+IFNGVDLNVFK+ ++DES+SDYNKRVLEI NESLMLGEKIP+SKIV
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSKDESVSDYNKRVLEIVNESLMLGEKIPNSKIVW
Query: K-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLIKQFSNVVKKFKNLNTIGSNA
K EAHDITTLKLDELFGSLLTFEM DRESKK K I+FKSTHVS++ VSDT+ NMNESIDLLIKQFSNVVKKFKNLNT GSNA
Subjt: K-----------------EAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAVSDTEGNMNESIDLLIKQFSNVVKKFKNLNTIGSNA
Query: PNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDSEAR
N+INYQRKDGENNTRR + NR +F + E SG
Subjt: PNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQICDKNFTFEELKVLWKEDSEAR
Query: TLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCYKLRRDILYV
V G G ++++ KG+I D+ YV
Subjt: TLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICHYFGQKGHIRPFCYKLRRDILYV
Query: DGLKANLISVSQLY-----------NYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVNS
DGLKANLISVSQL N VVINKDNQILMNGS QA+NCYHWI NNSEVCHLNKEDQT LWH KLGHIDLKSID+TVK +VVIGVPNI+VNS
Subjt: DGLKANLISVSQLY-----------NYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVNS
Query: KLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLIL
KLVCGDCLTEKQ KASHKSLKECSTNRVLELLHMDL G LQTESLGGKKYVFV EEDFSRFTW+RFLKDKYDTPKV ISLCLIL
Subjt: KLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLIL
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| A0A5D3CS19 Gag-pol polyprotein | 3.3e-145 | 47.28 | Show/hide |
Query: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
MI V+GVS+ KPE+ WTDA+EQASVG ARA+N IFNGVD NVFKLIN C+TAKEAWK LEVAYEGTSK DE+VS+YNKRVL
Subjt: MITVSGVSILKPEVYWTDAKEQASVGNARALNMIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEGTSK--------------------DESVSDYNKRVL
Query: EIVNESLMLGEKIPNSKIVW-----------------KEAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAV--SDTEGNMNESIDL
EIVN+ L+LGEKI SKIV KEA DITTL LDELFGSLLTFEMAI+DRESKK KGI+FKS + +K V S E N +ESI L
Subjt: EIVNESLMLGEKIPNSKIVW-----------------KEAHDITTLKLDELFGSLLTFEMAIADRESKKDKGISFKSTHVSEKAV--SDTEGNMNESIDL
Query: LIKQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQ
L KQFS + KKFK LNT R D EN+ R+ N++S RRNSD+G+K E G
Subjt: LIKQFSNVVKKFKNLNTIGSNAPNMINYQRKDGENNTRRFNENSNRRNSDYGRKKEREGRVFRCREYEDTGDGEEAKSMNAFTVCVSETDSGDESECSRQ
Query: ICDKNFTFEELKVLWKEDSEARTLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICH
+LD +L+SGQN +KYGLGFD + + T E K VP
Subjt: ICDKNFTFEELKVLWKEDSEARTLKSIKMLNSRTENLDVMLNSGQNGLNKYGLGFDAFARKMNTTTEIKFVPASVNDKTDTVTVTKVVSPSAKTTKWICH
Query: YFGQKGHIRPFCYKLRRDILYVDGLKANLISVSQLYNYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDV
+DI + DG +I+ + + +K+NQ+ M+G +++NCYHW N S +CHL K DQT LWH KLGHI L+S+DK ++ +
Subjt: YFGQKGHIRPFCYKLRRDILYVDGLKANLISVSQLYNYVVINKDNQILMNGSPQANNCYHWIPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDV
Query: VIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQREKG
V+G+P++++N K CGDC KQ K+SH LKEC T RVLELLH+DL G +QTESLGGKKYV V +D+SRFTW+ FLK K DT K+CISLCL LQ EKG
Subjt: VIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQREKG
Query: VKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAK
KI+RIRS+H KEF N DLNNFC EGIHHE +APIT NGVVE KN+TL +MA+VM+HAK
Subjt: VKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAK
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-24 | 29.96 | Show/hide |
Query: CYKLRRDILYVDGLKANLISVSQL----YNYVVIN------KDNQILMNGSPQANNCYHWIPNNSEVC--HLNKEDQTL---LWHIKLGHIDLKSIDKTV
C + +D+ +V L+ NLIS L Y N K + ++ G + N+E+C LN + LWH ++GH+ K +
Subjt: CYKLRRDILYVDGLKANLISVSQL----YNYVVIN------KDNQILMNGSPQANNCYHWIPNNSEVC--HLNKEDQTL---LWHIKLGHIDLKSIDKTV
Query: KKDVVIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQ
KK ++ V C CL KQ + S ++ E N +L+L++ D+ G ++ ES+GG KY +D SR W+ LK K +V +++
Subjt: KKDVVIGVPNINVNSKLVCGDCLTEKQIKASHKSLKECSTNRVLELLHMDLKGSLQTESLGGKKYVFVAEEDFSRFTWIRFLKDKYDTPKVCISLCLILQ
Query: REKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAKK
RE G K+ R+RS++G E+ + + +C S GI HE + P T HNGV E N+T+ + + ML K
Subjt: REKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLPKMAQVMLHAKK
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| P25384 Transposon Ty2-C Gag-Pol polyprotein | 2.1e-11 | 26.44 | Show/hide |
Query: IPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVN----SKLVCGDCLTEKQIKASH---KSLKECSTNRVLELLHMDLKGSLQTE
I N ++ +NK L+ H LGH + +SI K++KK+ V + ++ S C DCL K K H LK + + LH D+ G +
Subjt: IPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVN----SKLVCGDCLTEKQIKASH---KSLKECSTNRVLELLHMDLKGSLQTE
Query: SLGGKKYVFVAEEDFSRFTWIRFLKDKYDTP--KVCISLCLILQREKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLP
Y ++ +RF W+ L D+ + V S+ ++ + +++ I+ + G E+ N L+ F + GI Y+ S +GV E N+TL
Subjt: SLGGKKYVFVAEEDFSRFTWIRFLKDKYDTP--KVCISLCLILQREKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLP
Query: KMAQVMLH
+ +LH
Subjt: KMAQVMLH
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| Q03494 Transposon Ty2-DR2 Gag-Pol polyprotein | 2.1e-11 | 26.44 | Show/hide |
Query: IPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVN----SKLVCGDCLTEKQIKASH---KSLKECSTNRVLELLHMDLKGSLQTE
I N ++ +NK L+ H LGH + +SI K++KK+ V + ++ S C DCL K K H LK + + LH D+ G +
Subjt: IPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVN----SKLVCGDCLTEKQIKASH---KSLKECSTNRVLELLHMDLKGSLQTE
Query: SLGGKKYVFVAEEDFSRFTWIRFLKDKYDTP--KVCISLCLILQREKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLP
Y ++ +RF W+ L D+ + V S+ ++ + +++ I+ + G E+ N L+ F + GI Y+ S +GV E N+TL
Subjt: SLGGKKYVFVAEEDFSRFTWIRFLKDKYDTP--KVCISLCLILQREKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLP
Query: KMAQVMLH
+ +LH
Subjt: KMAQVMLH
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| Q12472 Transposon Ty2-DR1 Gag-Pol polyprotein | 2.1e-11 | 26.44 | Show/hide |
Query: IPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVN----SKLVCGDCLTEKQIKASH---KSLKECSTNRVLELLHMDLKGSLQTE
I N ++ +NK L+ H LGH + +SI K++KK+ V + ++ S C DCL K K H LK + + LH D+ G +
Subjt: IPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVN----SKLVCGDCLTEKQIKASH---KSLKECSTNRVLELLHMDLKGSLQTE
Query: SLGGKKYVFVAEEDFSRFTWIRFLKDKYDTP--KVCISLCLILQREKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLP
Y ++ +RF W+ L D+ + V S+ ++ + +++ I+ + G E+ N L+ F + GI Y+ S +GV E N+TL
Subjt: SLGGKKYVFVAEEDFSRFTWIRFLKDKYDTP--KVCISLCLILQREKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLP
Query: KMAQVMLH
+ +LH
Subjt: KMAQVMLH
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 2.1e-11 | 26.44 | Show/hide |
Query: IPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVN----SKLVCGDCLTEKQIKASH---KSLKECSTNRVLELLHMDLKGSLQTE
I N ++ +NK L+ H LGH + +SI K++KK+ V + ++ S C DCL K K H LK + + LH D+ G +
Subjt: IPNNSEVCHLNKEDQTLLWHIKLGHIDLKSIDKTVKKDVVIGVPNINVN----SKLVCGDCLTEKQIKASH---KSLKECSTNRVLELLHMDLKGSLQTE
Query: SLGGKKYVFVAEEDFSRFTWIRFLKDKYDTP--KVCISLCLILQREKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLP
Y ++ +RF W+ L D+ + V S+ ++ + +++ I+ + G E+ N L+ F + GI Y+ S +GV E N+TL
Subjt: SLGGKKYVFVAEEDFSRFTWIRFLKDKYDTP--KVCISLCLILQREKGVKIVRIRSNHGKEFKNGDLNNFCDSEGIHHEYSAPITSLHNGVVESKNKTLP
Query: KMAQVMLH
+ +LH
Subjt: KMAQVMLH
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