; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0001571 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001571
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:25210632..25212931
RNA-Seq ExpressionPay0001571
SyntenyPay0001571
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW63481.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.6e-2837.56Show/hide
Query:  ILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFS
        +L WNVRG N   KR VIK ++           E+ + ++   +V+S+ S   + W AL A+ S+GG+LI W + ++ V++    QFSIS R +      
Subjt:  ILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFS

Query:  GWI-TGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLG
         WI TGGDFNV+    E+    R +  M RF          ++P + G+FSWS      A +++DRFL+++ W+D F  V   RL   TS+HFPI+LK G
Subjt:  GWI-TGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLG

Query:  AQSWGPTPFIFEN
            GP+PF FEN
Subjt:  AQSWGPTPFIFEN

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.4e-2733.6Show/hide
Query:  MLILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNT-
        M IL WN RG  +  KR +++  L           E+K  T D   V SVW    V WAAL A  +SGGI+ILW    +   + +   FS+++  KFN+ 
Subjt:  MLILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNT-

Query:  --------------------------------SFSGWITGGDFNVVKWLNEKSFGVRPT---RCMVRF------NNIPFRNGLFSWSCSGIRPAASKIDR
                                        +F  W  GGDFNV++ ++EK    R T   RC   F       + P RN  F+WS     P   ++DR
Subjt:  --------------------------------SFSGWITGGDFNVVKWLNEKSFGVRPT---RCMVRF------NNIPFRNGLFSWSCSGIRPAASKIDR

Query:  FLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN
        FL S  W  FF +   E L   TS+H PI L+     WGPTPF FEN
Subjt:  FLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN

RVX08649.1 hypothetical protein CK203_010920 [Vitis vinifera]1.4e-2738.03Show/hide
Query:  ILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFS
        +L WNVRG N   KR VIK ++           E+K+  +   +V+S+ +   + W AL A+ S+GG+LI W + ++ +++    QFSIS R +      
Subjt:  ILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFS

Query:  GWI-TGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLG
         WI TGGDFNVV    E+S   R +  M RF          ++P + G+FSWS      A +++DRFL+S+ W+D    V   RL   TS+HFPI+LK G
Subjt:  GWI-TGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLG

Query:  AQSWGPTPFIFEN
            GP+PF FEN
Subjt:  AQSWGPTPFIFEN

XP_022145142.1 uncharacterized protein LOC111014657 [Momordica charantia]1.0e-3035.63Show/hide
Query:  MLILPWNVRGFNALPKRVVIKD-----------LLESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTS
        M IL WNVRG  +  KR  IKD           L E+K S+++N  +KS+WSS  + WA+L A  +SGGI++LW + S + V+ I   FSIS+  K   +
Subjt:  MLILPWNVRGFNALPKRVVIKD-----------LLESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTS

Query:  FSGWIT-------------------------------GGDFNVVKWLNEKSFGVRPTRCMVRFNNI--------PF-RNGLFSWSCSGIRP--AASKIDR
        F+ W+T                               G DFN+ +W +E S    P   M +FN+         PF  NG ++W  S +RP    S+I+R
Subjt:  FSGWIT-------------------------------GGDFNVVKWLNEKSFGVRPTRCMVRFNNI--------PF-RNGLFSWSCSGIRP--AASKIDR

Query:  FLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN
        FL SK W D F    ++RL    S+H+PILL+   Q WG  PF  EN
Subjt:  FLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN

XP_031739979.1 uncharacterized protein LOC116403332 [Cucumis sativus]1.4e-3551.98Show/hide
Query:  VRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFSGWIT-
        + G   L  + V+K+LL           +SKVSTV+ HLVKSVWSS  VGWA L+AY SSGGILILWKEDSITVVDSIQ QFSISI  KFN  FSGWIT 
Subjt:  VRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFSGWIT-

Query:  ------------------------------GGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSW
                                      GGDFNVV+WLNEKS    PTR M+RF          +IPFRNG FSW
Subjt:  ------------------------------GGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSW

TrEMBL top hitse value%identityAlignment
A0A2N9GVH2 Reverse transcriptase domain-containing protein3.0e-2832.78Show/hide
Query:  WNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSIS-----IRCKFNTS
        WNVRG N   KR+ IK+L+           E+K+  V   LVKS+W    V W  L++  +SGGIL++W    +  V+    QFS+S     +  +F  +
Subjt:  WNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSIS-----IRCKFNTS

Query:  FSG---------------------------WITGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKP
        FSG                           W   GDFNVV++ +E+S     +  M+ F+         +IP + G F+WS +    ++S+IDRFL+S  
Subjt:  FSG---------------------------WITGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKP

Query:  WVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN
        W  +F ++S +RL    S+HFP+LL  G    G  PF FEN
Subjt:  WVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN

A0A438FU79 Transposon TX1 uncharacterized 149 kDa protein1.7e-2837.56Show/hide
Query:  ILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFS
        +L WNVRG N   KR VIK ++           E+ + ++   +V+S+ S   + W AL A+ S+GG+LI W + ++ V++    QFSIS R +      
Subjt:  ILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFS

Query:  GWI-TGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLG
         WI TGGDFNV+    E+    R +  M RF          ++P + G+FSWS      A +++DRFL+++ W+D F  V   RL   TS+HFPI+LK G
Subjt:  GWI-TGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLG

Query:  AQSWGPTPFIFEN
            GP+PF FEN
Subjt:  AQSWGPTPFIFEN

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein6.6e-2833.6Show/hide
Query:  MLILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNT-
        M IL WN RG  +  KR +++  L           E+K  T D   V SVW    V WAAL A  +SGGI+ILW    +   + +   FS+++  KFN+ 
Subjt:  MLILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNT-

Query:  --------------------------------SFSGWITGGDFNVVKWLNEKSFGVRPT---RCMVRF------NNIPFRNGLFSWSCSGIRPAASKIDR
                                        +F  W  GGDFNV++ ++EK    R T   RC   F       + P RN  F+WS     P   ++DR
Subjt:  --------------------------------SFSGWITGGDFNVVKWLNEKSFGVRPT---RCMVRF------NNIPFRNGLFSWSCSGIRPAASKIDR

Query:  FLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN
        FL S  W  FF +   E L   TS+H PI L+     WGPTPF FEN
Subjt:  FLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN

A0A438JI68 Uncharacterized protein6.6e-2838.03Show/hide
Query:  ILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFS
        +L WNVRG N   KR VIK ++           E+K+  +   +V+S+ +   + W AL A+ S+GG+LI W + ++ +++    QFSIS R +      
Subjt:  ILPWNVRGFNALPKRVVIKDLL-----------ESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFS

Query:  GWI-TGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLG
         WI TGGDFNVV    E+S   R +  M RF          ++P + G+FSWS      A +++DRFL+S+ W+D    V   RL   TS+HFPI+LK G
Subjt:  GWI-TGGDFNVVKWLNEKSFGVRPTRCMVRFN---------NIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLG

Query:  AQSWGPTPFIFEN
            GP+PF FEN
Subjt:  AQSWGPTPFIFEN

A0A6J1CVN2 uncharacterized protein LOC1110146574.9e-3135.63Show/hide
Query:  MLILPWNVRGFNALPKRVVIKD-----------LLESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTS
        M IL WNVRG  +  KR  IKD           L E+K S+++N  +KS+WSS  + WA+L A  +SGGI++LW + S + V+ I   FSIS+  K   +
Subjt:  MLILPWNVRGFNALPKRVVIKD-----------LLESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTS

Query:  FSGWIT-------------------------------GGDFNVVKWLNEKSFGVRPTRCMVRFNNI--------PF-RNGLFSWSCSGIRP--AASKIDR
        F+ W+T                               G DFN+ +W +E S    P   M +FN+         PF  NG ++W  S +RP    S+I+R
Subjt:  FSGWIT-------------------------------GGDFNVVKWLNEKSFGVRPTRCMVRFNNI--------PF-RNGLFSWSCSGIRP--AASKIDR

Query:  FLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN
        FL SK W D F    ++RL    S+H+PILL+   Q WG  PF  EN
Subjt:  FLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATTCTCCCCTGGAATGTAAGGGGTTTTAATGCTCTCCCCAAAAGAGTGGTTATAAAAGACTTGCTTGAGTCTAAAGTTAGTACTGTCGATAATCATTTGGTTAA
GTCGGTTTGGAGTAGTTGTTGTGTTGGGTGGGCAGCTTTACAGGCTTATAGTTCTTCGGGTGGTATCCTTATATTGTGGAAAGAGGATTCGATCACGGTGGTTGACTCTA
TTCAAGATCAGTTCTCTATTTCTATTCGTTGTAAGTTTAACACTAGCTTCTCTGGTTGGATCACGGGTGGTGATTTCAATGTAGTCAAATGGTTAAATGAGAAAAGCTTC
GGCGTTCGTCCTACTAGATGTATGGTTCGTTTTAATAATATTCCCTTTCGAAATGGCTTGTTCTCTTGGTCCTGTTCTGGGATTAGGCCGGCTGCTTCAAAGATCGACAG
ATTTCTTCTATCCAAGCCTTGGGTTGATTTTTTCAAAGAAGTTAGTATGGAAAGACTTTCACATACCACCTCAAATCACTTTCCGATTCTTCTAAAACTAGGGGCGCAGT
CTTGGGGTCCTACCCCTTTTATATTCGAAAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATTCTCCCCTGGAATGTAAGGGGTTTTAATGCTCTCCCCAAAAGAGTGGTTATAAAAGACTTGCTTGAGTCTAAAGTTAGTACTGTCGATAATCATTTGGTTAA
GTCGGTTTGGAGTAGTTGTTGTGTTGGGTGGGCAGCTTTACAGGCTTATAGTTCTTCGGGTGGTATCCTTATATTGTGGAAAGAGGATTCGATCACGGTGGTTGACTCTA
TTCAAGATCAGTTCTCTATTTCTATTCGTTGTAAGTTTAACACTAGCTTCTCTGGTTGGATCACGGGTGGTGATTTCAATGTAGTCAAATGGTTAAATGAGAAAAGCTTC
GGCGTTCGTCCTACTAGATGTATGGTTCGTTTTAATAATATTCCCTTTCGAAATGGCTTGTTCTCTTGGTCCTGTTCTGGGATTAGGCCGGCTGCTTCAAAGATCGACAG
ATTTCTTCTATCCAAGCCTTGGGTTGATTTTTTCAAAGAAGTTAGTATGGAAAGACTTTCACATACCACCTCAAATCACTTTCCGATTCTTCTAAAACTAGGGGCGCAGT
CTTGGGGTCCTACCCCTTTTATATTCGAAAATGCTTGA
Protein sequenceShow/hide protein sequence
MLILPWNVRGFNALPKRVVIKDLLESKVSTVDNHLVKSVWSSCCVGWAALQAYSSSGGILILWKEDSITVVDSIQDQFSISIRCKFNTSFSGWITGGDFNVVKWLNEKSF
GVRPTRCMVRFNNIPFRNGLFSWSCSGIRPAASKIDRFLLSKPWVDFFKEVSMERLSHTTSNHFPILLKLGAQSWGPTPFIFENA