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Pay0001574 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001574
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag-pol polyprotein
Genome locationchr10:12295577..12296071
RNA-Seq ExpressionPay0001574
SyntenyPay0001574
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025734.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.9e-5874.07Show/hide
Query:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS
        MEIIREGPSASRPP+LD                  DG+AWRAL+ GYEPPM+T+D VSVLKPEVDW D EEQASVGNARA+NAIFNGVDLNVFKLINSC+
Subjt:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        T K+AW+IL+VAYEGTSKVKIS LQLITSKFE LKM+ED+ + EYNERVLEIAN+SLLL EK
Subjt:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

KAA0038419.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.5e-5874.07Show/hide
Query:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS
        MEIIREGPSASRPP+ D                  D +AWR L+ GYEPPM+TVDGVSV KP+VDW DAEEQASVGNARA+NAIFNG+DLNVFKLINSC+
Subjt:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        TAK+AW+IL+VAYEGTSKVKISRLQLITSKFEAL+M+ED+ + EYNERVLEIAN+SLLLGEK
Subjt:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

KAA0065827.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.8e-6285.42Show/hide
Query:  MEIIREGPSASRPPILDDGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCSTAKDAWRILKVAYEGTSK
        M IIREGPS S PP++DDGRAWRAL+ GYEP MITVDGV +LKPEVDW DAEE+ASVGNARALNAIFNG DLNVFKLINSCSTAK+AWRI++VAYEGTSK
Subjt:  MEIIREGPSASRPPILDDGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCSTAKDAWRILKVAYEGTSK

Query:  VKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        VKISRLQLITSKFEALKM ED+ + EYNERVLEIANESLLLGEK
Subjt:  VKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

TYJ96973.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.2e-5874.07Show/hide
Query:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS
        MEIIREGPSASRPP+ D                  D +AWR L+ GYEPPM+TVDGVSV KP+VDW DAEEQASVGNARA+NAIFNGVDLNVFKLINSC+
Subjt:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        TAK+AW+IL+VAYEGTSKVKISRLQLITSKFEAL+M++D+ + EYNERVLEIAN+SLLLGEK
Subjt:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

TYK14799.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.2e-5875.31Show/hide
Query:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS
        MEIIREGPSASRPPILD                  DGR WRAL+ GYEPPM+T+D VSV KPEV+W DAEEQASV NARA+NAIFNGVDLNVFKLINSC+
Subjt:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        TAKD W+IL+VAYEGTSKVKIS+LQLITSKFEALKM ED+L  EYNERVLEIAN+SLLL EK
Subjt:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

TrEMBL top hitse value%identityAlignment
A0A5A7SJ95 Gag-pol polyprotein9.2e-5974.07Show/hide
Query:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS
        MEIIREGPSASRPP+LD                  DG+AWRAL+ GYEPPM+T+D VSVLKPEVDW D EEQASVGNARA+NAIFNGVDLNVFKLINSC+
Subjt:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        T K+AW+IL+VAYEGTSKVKIS LQLITSKFE LKM+ED+ + EYNERVLEIAN+SLLL EK
Subjt:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

A0A5A7T4B1 Gag-pol polyprotein2.0e-5875.31Show/hide
Query:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS
        MEIIREGPSASRPPILD                  DGR WRAL+ GYEPPM+T+D VSV KPEV+W DAEEQASV NARA+NAIFNGVDLNVFKLINSC+
Subjt:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        TAKD W+IL+VAYEGTSKVKIS+LQLITSKFEALKM ED+L  EYNERVLEIAN+SLLL EK
Subjt:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

A0A5A7TAN7 Gag-pol polyprotein1.2e-5874.07Show/hide
Query:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS
        MEIIREGPSASRPP+ D                  D +AWR L+ GYEPPM+TVDGVSV KP+VDW DAEEQASVGNARA+NAIFNG+DLNVFKLINSC+
Subjt:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        TAK+AW+IL+VAYEGTSKVKISRLQLITSKFEAL+M+ED+ + EYNERVLEIAN+SLLLGEK
Subjt:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

A0A5A7VFI7 Gag-pol polyprotein1.4e-6285.42Show/hide
Query:  MEIIREGPSASRPPILDDGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCSTAKDAWRILKVAYEGTSK
        M IIREGPS S PP++DDGRAWRAL+ GYEP MITVDGV +LKPEVDW DAEE+ASVGNARALNAIFNG DLNVFKLINSCSTAK+AWRI++VAYEGTSK
Subjt:  MEIIREGPSASRPPILDDGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCSTAKDAWRILKVAYEGTSK

Query:  VKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        VKISRLQLITSKFEALKM ED+ + EYNERVLEIANESLLLGEK
Subjt:  VKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

A0A5D3BCD8 Gag-pol polyprotein1.6e-5874.07Show/hide
Query:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS
        MEIIREGPSASRPP+ D                  D +AWR L+ GYEPPM+TVDGVSV KP+VDW DAEEQASVGNARA+NAIFNGVDLNVFKLINSC+
Subjt:  MEIIREGPSASRPPILD------------------DGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK
        TAK+AW+IL+VAYEGTSKVKISRLQLITSKFEAL+M++D+ + EYNERVLEIAN+SLLLGEK
Subjt:  TAKDAWRILKVAYEGTSKVKISRLQLITSKFEALKMSEDKLMPEYNERVLEIANESLLLGEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAATCAGAGAGGGACCTTCAGCTTCTCGTCCTCCTATACTGGATGATGGGAGAGCTTGGAGAGCTCTTATGGTTGGATATGAACCTCCGATGATTACTGTAGA
TGGAGTATCAGTTCTGAAACCTGAGGTTGACTGGATTGATGCTGAAGAACAAGCATCGGTTGGGAATGCTAGAGCTCTAAATGCAATATTCAATGGTGTGGATCTAAATG
TGTTCAAACTAATAAACTCCTGTAGTACAGCCAAAGATGCATGGAGAATATTGAAAGTTGCTTATGAAGGGACGTCTAAAGTTAAGATATCCAGACTACAACTGATAACA
TCGAAATTTGAAGCATTAAAAATGTCTGAAGATAAATTGATGCCCGAGTACAATGAGAGAGTTCTGGAGATTGCTAATGAATCACTGCTGCTTGGTGAAAAAAAAACCTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAATCAGAGAGGGACCTTCAGCTTCTCGTCCTCCTATACTGGATGATGGGAGAGCTTGGAGAGCTCTTATGGTTGGATATGAACCTCCGATGATTACTGTAGA
TGGAGTATCAGTTCTGAAACCTGAGGTTGACTGGATTGATGCTGAAGAACAAGCATCGGTTGGGAATGCTAGAGCTCTAAATGCAATATTCAATGGTGTGGATCTAAATG
TGTTCAAACTAATAAACTCCTGTAGTACAGCCAAAGATGCATGGAGAATATTGAAAGTTGCTTATGAAGGGACGTCTAAAGTTAAGATATCCAGACTACAACTGATAACA
TCGAAATTTGAAGCATTAAAAATGTCTGAAGATAAATTGATGCCCGAGTACAATGAGAGAGTTCTGGAGATTGCTAATGAATCACTGCTGCTTGGTGAAAAAAAAACCTA
A
Protein sequenceShow/hide protein sequence
MEIIREGPSASRPPILDDGRAWRALMVGYEPPMITVDGVSVLKPEVDWIDAEEQASVGNARALNAIFNGVDLNVFKLINSCSTAKDAWRILKVAYEGTSKVKISRLQLIT
SKFEALKMSEDKLMPEYNERVLEIANESLLLGEKKT