| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035966.1 F5J5.1 [Cucumis melo var. makuwa] | 7.5e-145 | 50.07 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
+I VNGV VP EVD +AEEQ+SVGN RALN IFNGVD+NVFKLINSCS AKEAWKTLEVAYEGTSKVKISRLQLITSKF ALRMTEDESVSDYNKRVL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: E---------------------------------------------------------------------------------------KSQMN-------
+ K+ M+
Subjt: E---------------------------------------------------------------------------------------KSQMN-------
Query: ---------------------LYCSKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQY
L KKNFRVTLSDEESVDSRDDDGN D+++ECSVESKNDELSIEKL+TLWKEDCEAR IQKE IQ
Subjt: ---------------------LYCSKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQY
Query: LLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKS
LLEENEWLMSVISSLKLKLREV NENDQILKSVKMLNS NLDSILK HNGS RYGLGFV+SASSSKATSEIKFVPA MRV+YDTIHLETGIR +KS
Subjt: LLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKS
Query: LGRTCYYCGRKGHI---------------------------------------------------------------------------------SDGAK
LGRT YYCG+KGHI DGAK
Subjt: LGRTCYYCGRKGHI---------------------------------------------------------------------------------SDGAK
Query: GKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDV--------------------------------VDKIRS---WPWHRKLGHVS
GKIIAKGNI+KDDLPRLNDVRYVDGL ANLISI+QLCD GYKVSFDD+ + IRS W WHRKL H S
Subjt: GKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDV--------------------------------VDKIRS---WPWHRKLGHVS
Query: MRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQ---------TRSTHKTSVKG--------------------KKITRIRSDH
MR LEK+IKN+ +VGIP+LDVNGNFFCGD QIGK+ TR T +KG KKITRIRSDH
Subjt: MRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQ---------TRSTHKTSVKG--------------------KKITRIRSDH
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| KAA0042995.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.4e-199 | 53.68 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
MI VNGV +P EVD D EEQ+SVGNARALN IFNGVD+NVFKLIN CS AKEAWKTLEVAYEGTSKVKISRLQL TSKF ALRMTEDESVSDYNK VL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: EKSQMNLYC---------------------------------------------------------------------------------SKKNFRVTLS
E + +L KKNFRVTLS
Subjt: EKSQMNLYC---------------------------------------------------------------------------------SKKNFRVTLS
Query: DEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVK
D+E VDSRDDDGN D+D+ECS+ESKNDELSIEKLETLWKEDCEARAIQKERIQ LLEENE LMS
Subjt: DEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVK
Query: MLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHI--------------------
NLDSILKA HNGSHRYGLGFVASASSSKATSEIKFVPA MRV+YDTIH +TGIRTP+KSLGRTCYYCGRKGHI
Subjt: MLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHI--------------------
Query: -------------------------------------------------------------SDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISIS
DGAKGKIIAKGNIDKDDL RLNDVRYVDGL ANLI+IS
Subjt: -------------------------------------------------------------SDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISIS
Query: QLCDHGYKVSFDDV-----------------------------------VDKIRSWPWHRKLGHVSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGK
QLCD GYKVSFDD+ + ++W WHRKLGHVSMR LEK+IKN+ +VGIPNLDVNGNFFC D QIGK
Subjt: QLCDHGYKVSFDDV-----------------------------------VDKIRSWPWHRKLGHVSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGK
Query: QTRSTHKT------------------------SVKG--------------------KKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVV
QTRSTHK+ S+ G KKITRIRSDHG E D E FNSFCL EG HHEF APITPQQNGVV
Subjt: QTRSTHKT------------------------SVKG--------------------KKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVV
Query: ERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWEETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
ERKN+TL+EM RVMIHAKNLPLCF+AEAVN ACHIH RVTIRTGTT+TLYE W+E K NVKYFHVFGSTCYILADREYH+KWDARS+Q
Subjt: ERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWEETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
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| KAA0053200.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.3e-149 | 59.26 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
MITVNG+ VP EVD IDAEEQ+SVGNAR LN IFNGVD+NVFKLINSCS AKEAWKTL+V YEGTSKVKI+RLQLIT KF ALRM E+ESVSDYNKRVL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: EKSQMNLYC-------------------------------------------------------------------------------------------
E + +L
Subjt: EKSQMNLYC-------------------------------------------------------------------------------------------
Query: ---------------------------------------SKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWK
KKNF VTLSDEE VDSRDD GN D+D+ECSVESKNDEL IEKLETLWK
Subjt: ---------------------------------------SKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWK
Query: EDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKY
EDCEAR IQKERIQ LLEENE LMSVISSLKLKLREV NENDQILKS KMLNS +NLDSILKA HNGSHR+GLGFVASASSSKATSEIKFVPA MRV+Y
Subjt: EDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKY
Query: DTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRS---WPWHRKLGH
DTIH+ETGIRTPIKS GRTCYYCGRKGHI KIIAK NID DDLPRLNDVRYVDGL ANLIS+SQLCD GYKVSFDD+ IRS W WHRKLGH
Subjt: DTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRS---WPWHRKLGH
Query: VSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRS
VS+R L K+IKN+ +VGIP+LDVNGNFF GD QIGK+ S
Subjt: VSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRS
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| TYK00141.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.5e-149 | 59.07 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
MITVNG+ VP EVD IDAEEQ+SVGNAR LN IFNGVD+NVFKLINSCS AKEAWKTL+V YEGTSKVKI+RLQLIT KF ALRM E+ESVSDYNKRVL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: EKSQMNLYC-------------------------------------------------------------------------------------------
E + +L
Subjt: EKSQMNLYC-------------------------------------------------------------------------------------------
Query: ---------------------------------------SKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWK
KKNF VTLSDEE VDSRDD GN D+D+ECSVESKNDEL IEKLETLWK
Subjt: ---------------------------------------SKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWK
Query: EDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKY
EDCEAR IQKERIQ LLEENE LMSVISSLKLKLREV NENDQILKS KMLNS +NLDSILKA HNGS+R+GLGFVASASSSKATSEIKFVPA MRV+Y
Subjt: EDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKY
Query: DTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRS---WPWHRKLGH
DTIH+ETGIRTPIKS GRTCYYCGRKGHI KIIAK NID DDLPRLNDVRYVDGL ANLIS+SQLCD GYKVSFDD+ IRS W WHRKLGH
Subjt: DTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRS---WPWHRKLGH
Query: VSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRS
VS+R L K+IKN+ +VGIP+LDVNGNFF GD QIGK+ S
Subjt: VSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRS
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| XP_016902072.1 PREDICTED: uncharacterized protein LOC107991529 [Cucumis melo] | 2.3e-295 | 96.07 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: EKSQMNLYCSKKNFRVTLSDEESVDSRDDDGNDNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQ
EKSQMNLYCSKKNFRVTLSDEESVDSRDDDGNDNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQ
Subjt: EKSQMNLYCSKKNFRVTLSDEESVDSRDDDGNDNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQ
Query: ILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNI
ILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNI
Subjt: ILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNI
Query: DKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRSWPWHRKLGHVSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRSTHKTSV
DKDDLPRLNDV+YVDGLNANLISISQLCDHGYKV+FDDVVDKIRSWPWHRKLGHVSMR EK+IKN+ +VGIP+L+VNGNFF GDYQI SV
Subjt: DKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRSWPWHRKLGHVSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRSTHKTSV
Query: KGKKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWE
KGKKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWE
Subjt: KGKKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWE
Query: ETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
ETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
Subjt: ETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E1H2 uncharacterized protein LOC107991529 | 1.1e-295 | 96.07 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: EKSQMNLYCSKKNFRVTLSDEESVDSRDDDGNDNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQ
EKSQMNLYCSKKNFRVTLSDEESVDSRDDDGNDNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQ
Subjt: EKSQMNLYCSKKNFRVTLSDEESVDSRDDDGNDNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQ
Query: ILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNI
ILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNI
Subjt: ILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNI
Query: DKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRSWPWHRKLGHVSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRSTHKTSV
DKDDLPRLNDV+YVDGLNANLISISQLCDHGYKV+FDDVVDKIRSWPWHRKLGHVSMR EK+IKN+ +VGIP+L+VNGNFF GDYQI SV
Subjt: DKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRSWPWHRKLGHVSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRSTHKTSV
Query: KGKKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWE
KGKKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWE
Subjt: KGKKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWE
Query: ETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
ETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
Subjt: ETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
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| A0A5A7TNK7 Gag-pol polyprotein | 6.7e-200 | 53.68 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
MI VNGV +P EVD D EEQ+SVGNARALN IFNGVD+NVFKLIN CS AKEAWKTLEVAYEGTSKVKISRLQL TSKF ALRMTEDESVSDYNK VL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: EKSQMNLYC---------------------------------------------------------------------------------SKKNFRVTLS
E + +L KKNFRVTLS
Subjt: EKSQMNLYC---------------------------------------------------------------------------------SKKNFRVTLS
Query: DEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVK
D+E VDSRDDDGN D+D+ECS+ESKNDELSIEKLETLWKEDCEARAIQKERIQ LLEENE LMS
Subjt: DEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVK
Query: MLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHI--------------------
NLDSILKA HNGSHRYGLGFVASASSSKATSEIKFVPA MRV+YDTIH +TGIRTP+KSLGRTCYYCGRKGHI
Subjt: MLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKSLGRTCYYCGRKGHI--------------------
Query: -------------------------------------------------------------SDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISIS
DGAKGKIIAKGNIDKDDL RLNDVRYVDGL ANLI+IS
Subjt: -------------------------------------------------------------SDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISIS
Query: QLCDHGYKVSFDDV-----------------------------------VDKIRSWPWHRKLGHVSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGK
QLCD GYKVSFDD+ + ++W WHRKLGHVSMR LEK+IKN+ +VGIPNLDVNGNFFC D QIGK
Subjt: QLCDHGYKVSFDDV-----------------------------------VDKIRSWPWHRKLGHVSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGK
Query: QTRSTHKT------------------------SVKG--------------------KKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVV
QTRSTHK+ S+ G KKITRIRSDHG E D E FNSFCL EG HHEF APITPQQNGVV
Subjt: QTRSTHKT------------------------SVKG--------------------KKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVV
Query: ERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWEETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
ERKN+TL+EM RVMIHAKNLPLCF+AEAVN ACHIH RVTIRTGTT+TLYE W+E K NVKYFHVFGSTCYILADREYH+KWDARS+Q
Subjt: ERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWEETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
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| A0A5A7UDB5 Gag-pol polyprotein | 6.4e-150 | 59.26 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
MITVNG+ VP EVD IDAEEQ+SVGNAR LN IFNGVD+NVFKLINSCS AKEAWKTL+V YEGTSKVKI+RLQLIT KF ALRM E+ESVSDYNKRVL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: EKSQMNLYC-------------------------------------------------------------------------------------------
E + +L
Subjt: EKSQMNLYC-------------------------------------------------------------------------------------------
Query: ---------------------------------------SKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWK
KKNF VTLSDEE VDSRDD GN D+D+ECSVESKNDEL IEKLETLWK
Subjt: ---------------------------------------SKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWK
Query: EDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKY
EDCEAR IQKERIQ LLEENE LMSVISSLKLKLREV NENDQILKS KMLNS +NLDSILKA HNGSHR+GLGFVASASSSKATSEIKFVPA MRV+Y
Subjt: EDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKY
Query: DTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRS---WPWHRKLGH
DTIH+ETGIRTPIKS GRTCYYCGRKGHI KIIAK NID DDLPRLNDVRYVDGL ANLIS+SQLCD GYKVSFDD+ IRS W WHRKLGH
Subjt: DTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRS---WPWHRKLGH
Query: VSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRS
VS+R L K+IKN+ +VGIP+LDVNGNFF GD QIGK+ S
Subjt: VSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRS
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| A0A5D3BJZ7 Gag-pol polyprotein | 3.2e-149 | 59.07 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
MITVNG+ VP EVD IDAEEQ+SVGNAR LN IFNGVD+NVFKLINSCS AKEAWKTL+V YEGTSKVKI+RLQLIT KF ALRM E+ESVSDYNKRVL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: EKSQMNLYC-------------------------------------------------------------------------------------------
E + +L
Subjt: EKSQMNLYC-------------------------------------------------------------------------------------------
Query: ---------------------------------------SKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWK
KKNF VTLSDEE VDSRDD GN D+D+ECSVESKNDEL IEKLETLWK
Subjt: ---------------------------------------SKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWK
Query: EDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKY
EDCEAR IQKERIQ LLEENE LMSVISSLKLKLREV NENDQILKS KMLNS +NLDSILKA HNGS+R+GLGFVASASSSKATSEIKFVPA MRV+Y
Subjt: EDCEARAIQKERIQYLLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKY
Query: DTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRS---WPWHRKLGH
DTIH+ETGIRTPIKS GRTCYYCGRKGHI KIIAK NID DDLPRLNDVRYVDGL ANLIS+SQLCD GYKVSFDD+ IRS W WHRKLGH
Subjt: DTIHLETGIRTPIKSLGRTCYYCGRKGHISDGAKGKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDVVDKIRS---WPWHRKLGH
Query: VSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRS
VS+R L K+IKN+ +VGIP+LDVNGNFF GD QIGK+ S
Subjt: VSMRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQTRS
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| A0A5D3E2Y4 F5J5.1 | 3.6e-145 | 50.07 | Show/hide |
Query: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
+I VNGV VP EVD +AEEQ+SVGN RALN IFNGVD+NVFKLINSCS AKEAWKTLEVAYEGTSKVKISRLQLITSKF ALRMTEDESVSDYNKRVL
Subjt: MITVNGVLVPNLEVDCIDAEEQSSVGNARALNVIFNGVDVNVFKLINSCSIAKEAWKTLEVAYEGTSKVKISRLQLITSKFGALRMTEDESVSDYNKRVL
Query: E---------------------------------------------------------------------------------------KSQMN-------
+ K+ M+
Subjt: E---------------------------------------------------------------------------------------KSQMN-------
Query: ---------------------LYCSKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQY
L KKNFRVTLSDEESVDSRDDDGN D+++ECSVESKNDELSIEKL+TLWKEDCEAR IQKE IQ
Subjt: ---------------------LYCSKKNFRVTLSDEESVDSRDDDGN-------------DNDNECSVESKNDELSIEKLETLWKEDCEARAIQKERIQY
Query: LLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKS
LLEENEWLMSVISSLKLKLREV NENDQILKSVKMLNS NLDSILK HNGS RYGLGFV+SASSSKATSEIKFVPA MRV+YDTIHLETGIR +KS
Subjt: LLEENEWLMSVISSLKLKLREVHNENDQILKSVKMLNSRMDNLDSILKARHNGSHRYGLGFVASASSSKATSEIKFVPALMRVKYDTIHLETGIRTPIKS
Query: LGRTCYYCGRKGHI---------------------------------------------------------------------------------SDGAK
LGRT YYCG+KGHI DGAK
Subjt: LGRTCYYCGRKGHI---------------------------------------------------------------------------------SDGAK
Query: GKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDV--------------------------------VDKIRS---WPWHRKLGHVS
GKIIAKGNI+KDDLPRLNDVRYVDGL ANLISI+QLCD GYKVSFDD+ + IRS W WHRKL H S
Subjt: GKIIAKGNIDKDDLPRLNDVRYVDGLNANLISISQLCDHGYKVSFDDV--------------------------------VDKIRS---WPWHRKLGHVS
Query: MRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQ---------TRSTHKTSVKG--------------------KKITRIRSDH
MR LEK+IKN+ +VGIP+LDVNGNFFCGD QIGK+ TR T +KG KKITRIRSDH
Subjt: MRVLEKIIKNEVIVGIPNLDVNGNFFCGDYQIGKQ---------TRSTHKTSVKG--------------------KKITRIRSDH
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.0e-15 | 36.75 | Show/hide |
Query: KITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIR--TGTTVTLYELWEE
K+ + D+G E + + FC+ +GI + P TPQ NGV ER RT+ E R M+ L FW EAV A ++ R+ R ++ T YE+W
Subjt: KITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIR--TGTTVTLYELWEE
Query: TKPNVKYFHVFGSTCYI
KP +K+ VFG+T Y+
Subjt: TKPNVKYFHVFGSTCYI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-17 | 36.64 | Show/hide |
Query: GKKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWEE
G+K+ R+RSD+G E + +F +C S GI HE P TPQ NGV ER NRT+ E R M+ LP FW EAV AC++ R +W
Subjt: GKKITRIRSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVTIRTGTTVTLYELWEE
Query: TKPNVKYFHVFGSTCYILADREYHQKWDARS
+ + + VFG + +E K D +S
Subjt: TKPNVKYFHVFGSTCYILADREYHQKWDARS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.9e-06 | 29.53 | Show/hide |
Query: KQTRSTHKTSVKGKKITRI---RSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVT
K+T T K ++ + TRI SD+G E + GI H P TP+ NG+ ERK+R + E ++ ++P +W A +A ++ R+
Subjt: KQTRSTHKTSVKGKKITRI---RSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVT
Query: IRTGTTVTLYELWEETKPNVKYFHVFGSTCYILADREYHQ-KWDARSKQ
+ ++ T PN VFG CY R Y+Q K D +S+Q
Subjt: IRTGTTVTLYELWEETKPNVKYFHVFGSTCYILADREYHQ-KWDARSKQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.2e-06 | 27.7 | Show/hide |
Query: KQTRSTHKTSVKGKKITRI---RSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVT
K T K+ V+ + TRI SD+G E + GI H P TP+ NG+ ERK+R + EM ++ ++P +W A ++A ++ R+
Subjt: KQTRSTHKTSVKGKKITRI---RSDHGNESDTEDFNSFCLSEGIHHEFFAPITPQQNGVVERKNRTLREMDRVMIHAKNLPLCFWAEAVNIACHIHKRVT
Query: IRTGTTVTLYELWEETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
+ ++ PN + VFG CY K + +SKQ
Subjt: IRTGTTVTLYELWEETKPNVKYFHVFGSTCYILADREYHQKWDARSKQ
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