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Pay0001613 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001613
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr09:15560719..15561102
RNA-Seq ExpressionPay0001613
SyntenyPay0001613
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066174.1 uncharacterized protein E6C27_scaffold21G001820 [Cucumis melo var. makuwa]1.1e-62100Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
        SSTRMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
XP_008463186.1 PREDICTED: uncharacterized protein LOC103501394 [Cucumis melo]2.5e-6299.21Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLK+DWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
        SSTRMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
XP_031737372.1 uncharacterized protein LOC116402244 [Cucumis sativus]1.7e-5083.46Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        +TDNG++FSNSMM+KL EKFKFKQYKSSMYN  A+GLAE FNKTLCNLLKKI+SK K+DWQE+IGE+LWA RTTH T TGVTPYSLVYGVEAVL L+REI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
         S RMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.7e-5083.46Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        +TDNG++FSNSMM+KL EKFKFKQYKSSMYN  A+GLAE FNKTLCNLLKKI+SK K+DWQE+IGE+LWA RTTH T TGVTPYSLVYGVEAVL L+REI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
         S RMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.7e-5083.46Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        +TDNG++FSNSMM+KL EKFKFKQYKSSMYN  A+GLAE FNKTLCNLLKKI+SK K+DWQE+IGE+LWA RTTH T TGVTPYSLVYGVEAVL L+REI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
         S RMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
TrEMBL top hitse value%identityAlignment
A0A1S3CIN4 uncharacterized protein LOC1035013941.2e-6299.21Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLK+DWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
        SSTRMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
A0A5A7VE52 Integrase catalytic domain-containing protein1.2e-4981.89Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        +TDNGR+FSNSM++KL EKFKFKQYKSSMYN   +GL E FNKTLCNLLKKI+SK K+DWQERIGE+LWA RTTH T TGVTPYSLVYGVEAVL L+REI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
         S RMAVQEGLTTEDNVKLRLQ+LEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
A0A5A7VFT5 Integrase catalytic domain-containing protein5.4e-63100Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
        SSTRMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
A0A5D3C8N8 Ribonuclease H1.5e-4982.68Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        MTDNGR+FSNSM++KL EKFKFKQYKSSMYN  A+GLAE FNKTLCNLLKKI+SK  +DWQERIGE+LWA RTTH T  GVTPYSLVYGVE VL L+REI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
         S RMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
A0A5D3DVM7 Ribonuclease H3.0e-5083.46Show/hide
Query:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI
        MTDNGR+FSNSM++KL  KFKFKQYKSSMYN  A+GLAE FNKTLCNLLKKI+SK K+DWQERIGE+LWA RTTH T TGVTPYSLVYGVE VL L+REI
Subjt:  MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREI

Query:  SSTRMAVQEGLTTEDNVKLRLQELEAL
         S RMAVQEGLTTEDNVKLRLQELEAL
Subjt:  SSTRMAVQEGLTTEDNVKLRLQELEAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATAATGGAAGGAAATTCTCCAATAGCATGATGGAAAAACTATATGAAAAATTCAAGTTCAAGCAATACAAGTCATCCATGTACAACGAAGTTGCGGAT
GGCTTAGCAGAAACATTCAACAAAACATTGTGCAATCTTCTGAAGAAAATTATCTCCAAGTTGAAGAAGGATTGGCAAGAAAGGATCGGTGAATCATTATGGGCT
TCTCGAACCACACATCACACTCTTACAGGGGTTACACCATATTCGCTTGTTTACGGTGTAGAGGCTGTCCTTTTCCTCAAAAGAGAAATCTCATCAACAAGAATG
GCAGTGCAAGAGGGGTTGACTACTGAAGACAATGTCAAGTTACGTCTTCAAGAGTTAGAAGCACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATAATGGAAGGAAATTCTCCAATAGCATGATGGAAAAACTATATGAAAAATTCAAGTTCAAGCAATACAAGTCATCCATGTACAACGAAGTTGCGGAT
GGCTTAGCAGAAACATTCAACAAAACATTGTGCAATCTTCTGAAGAAAATTATCTCCAAGTTGAAGAAGGATTGGCAAGAAAGGATCGGTGAATCATTATGGGCT
TCTCGAACCACACATCACACTCTTACAGGGGTTACACCATATTCGCTTGTTTACGGTGTAGAGGCTGTCCTTTTCCTCAAAAGAGAAATCTCATCAACAAGAATG
GCAGTGCAAGAGGGGTTGACTACTGAAGACAATGTCAAGTTACGTCTTCAAGAGTTAGAAGCACTATGA
Protein sequenceShow/hide protein sequence
MTDNGRKFSNSMMEKLYEKFKFKQYKSSMYNEVADGLAETFNKTLCNLLKKIISKLKKDWQERIGESLWASRTTHHTLTGVTPYSLVYGVEAVLFLKREISSTRM
AVQEGLTTEDNVKLRLQELEAL