; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0001643 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001643
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr11:22865369..22866956
RNA-Seq ExpressionPay0001643
SyntenyPay0001643
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054854.1 uncharacterized protein E6C27_scaffold406G00610 [Cucumis melo var. makuwa]1.1e-4259.04Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGT-----------------
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETD EGHFKYCFMAIGACIEGWKYCRPNISVD         +++S Y  T                 
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGT-----------------

Query:  -------------------------LLTASTIDV----RPVGNHANWKSIGIENNILPPTFKRRAG
                                 +  A  +DV    RPVGNHANWKSIGIENNILPPTFKRRAG
Subjt:  -------------------------LLTASTIDV----RPVGNHANWKSIGIENNILPPTFKRRAG

TYK14543.1 uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa]7.8e-4444.27Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTID----------------
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTID                
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTID----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG
                                +RPVGNHANWKSIGIENNILPPTFKRRAG
Subjt:  ------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG

TYK22454.1 uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa]2.5e-4257.83Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGTLLTASTID---------
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVD         +++S Y       S ++         
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGTLLTASTID---------

Query:  -------------------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG
                                             +RPVGNHANWKSIGIENNILPPTFKRRAG
Subjt:  -------------------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG

TYK28211.1 MuDR family transposase [Cucumis melo var. makuwa]2.5e-4257.83Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGTLLTASTID---------
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVD         +++S Y       S ++         
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGTLLTASTID---------

Query:  -------------------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG
                                             +RPVGNHANWKSIGIENNILPPTFKRRAG
Subjt:  -------------------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG

XP_016901943.1 PREDICTED: uncharacterized protein LOC107991486 [Cucumis melo]1.1e-61100Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTIDVRPVGNHANWKSIGIE
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTIDVRPVGNHANWKSIGIE
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTIDVRPVGNHANWKSIGIE

Query:  NNILPPTFKRRAG
        NNILPPTFKRRAG
Subjt:  NNILPPTFKRRAG

TrEMBL top hitse value%identityAlignment
A0A1S4E145 uncharacterized protein LOC1079914865.3e-62100Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTIDVRPVGNHANWKSIGIE
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTIDVRPVGNHANWKSIGIE
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTIDVRPVGNHANWKSIGIE

Query:  NNILPPTFKRRAG
        NNILPPTFKRRAG
Subjt:  NNILPPTFKRRAG

A0A5A7UI69 SWIM-type domain-containing protein5.5e-4359.04Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGT-----------------
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETD EGHFKYCFMAIGACIEGWKYCRPNISVD         +++S Y  T                 
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGT-----------------

Query:  -------------------------LLTASTIDV----RPVGNHANWKSIGIENNILPPTFKRRAG
                                 +  A  +DV    RPVGNHANWKSIGIENNILPPTFKRRAG
Subjt:  -------------------------LLTASTIDV----RPVGNHANWKSIGIENNILPPTFKRRAG

A0A5D3C8T8 SWIM-type domain-containing protein1.2e-4257.83Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGTLLTASTID---------
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVD         +++S Y       S ++         
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGTLLTASTID---------

Query:  -------------------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG
                                             +RPVGNHANWKSIGIENNILPPTFKRRAG
Subjt:  -------------------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG

A0A5D3CRP1 SWIM-type domain-containing protein3.8e-4444.27Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTID----------------
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTID                
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTID----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG
                                +RPVGNHANWKSIGIENNILPPTFKRRAG
Subjt:  ------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG

A0A5D3DFS5 SWIM-type domain-containing protein1.2e-4257.83Show/hide
Query:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGTLLTASTID---------
        MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVD         +++S Y       S ++         
Subjt:  MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDT-------FLKSKYGGTLLTASTID---------

Query:  -------------------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG
                                             +RPVGNHANWKSIGIENNILPPTFKRRAG
Subjt:  -------------------------------------VRPVGNHANWKSIGIENNILPPTFKRRAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase5.0e-0426.51Show/hide
Query:  GEAKESYALIPNFFMKLKEIN----PGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTID
        G+  +S+ ++P         N       +  +       F+  F +    IEG+++CRP I VD   L  KY   L+ AS +D
Subjt:  GEAKESYALIPNFFMKLKEIN----PGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTTTGAATGGTGAAGCAAAAGAATCTTATGCCTTGATTCCAAACTTTTTTATGAAACTAAAAGAAATTAACCCAGGTTCATTCACTGCTTATGAAACTGATAC
AGAGGGTCATTTTAAGTACTGTTTTATGGCTATTGGAGCATGCATTGAAGGATGGAAATATTGTAGGCCCAACATATCAGTTGACGATACATTTTTGAAATCTAAATATG
GTGGAACTCTTTTAACAGCCTCAACAATTGATGTTCGTCCGGTTGGGAACCATGCTAATTGGAAGTCTATTGGGATTGAGAATAACATACTACCTCCAACTTTCAAGCGT
CGAGCAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCTTTGAATGGTGAAGCAAAAGAATCTTATGCCTTGATTCCAAACTTTTTTATGAAACTAAAAGAAATTAACCCAGGTTCATTCACTGCTTATGAAACTGATAC
AGAGGGTCATTTTAAGTACTGTTTTATGGCTATTGGAGCATGCATTGAAGGATGGAAATATTGTAGGCCCAACATATCAGTTGACGATACATTTTTGAAATCTAAATATG
GTGGAACTCTTTTAACAGCCTCAACAATTGATGTTCGTCCGGTTGGGAACCATGCTAATTGGAAGTCTATTGGGATTGAGAATAACATACTACCTCCAACTTTCAAGCGT
CGAGCAGGATGA
Protein sequenceShow/hide protein sequence
MNSLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNISVDDTFLKSKYGGTLLTASTIDVRPVGNHANWKSIGIENNILPPTFKR
RAG