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Pay0001698 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001698
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionprotein PAM68, chloroplastic
Genome locationchr06:35269943..35271365
RNA-Seq ExpressionPay0001698
SyntenyPay0001698
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR021855 - PAM68-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146119.1 protein PAM68, chloroplastic isoform X2 [Cucumis sativus]1.7e-6971.5Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTI--NQNQTRTNHPTSLNATLRQ--------------------------EDNEE
        MAAIAGSLNLPLAPSNLPLLRIK KNC+FS+HIKS ERNCFPN RPTI  NQNQT TN PTSLNATLR+                          E+ EE
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTI--NQNQTRTNHPTSLNATLRQ--------------------------EDNEE

Query:  EEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENW
        E++ EEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + +NW
Subjt:  EEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENW

Query:  PVFWQSIWGGSNKK
        PVFW+SIWGGSNKK
Subjt:  PVFWQSIWGGSNKK

XP_008448604.1 PREDICTED: protein PAM68, chloroplastic isoform X1 [Cucumis melo]1.4e-7976.5Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-------------------------------QED
        MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR                               +ED
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-------------------------------QED

Query:  NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSS
        NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + 
Subjt:  NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSS

Query:  ENWPVFWQSIWGGSNKK
        +NWPVFWQSIWGGSNKK
Subjt:  ENWPVFWQSIWGGSNKK

XP_008448605.1 PREDICTED: protein PAM68, chloroplastic isoform X2 [Cucumis melo]1.3e-7776.04Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-------------------------------QED
        MAAIAGSLNLPLAPSNLPLLRIK KNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR                               +ED
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-------------------------------QED

Query:  NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSS
        NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + 
Subjt:  NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSS

Query:  ENWPVFWQSIWGGSNKK
        +NWPVFWQSIWGGSNKK
Subjt:  ENWPVFWQSIWGGSNKK

XP_011650314.1 protein PAM68, chloroplastic isoform X1 [Cucumis sativus]1.8e-7171.96Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTI--NQNQTRTNHPTSLNATLRQ--------------------------EDNEE
        MAAIAGSLNLPLAPSNLPLLRIKQKNC+FS+HIKS ERNCFPN RPTI  NQNQT TN PTSLNATLR+                          E+ EE
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTI--NQNQTRTNHPTSLNATLRQ--------------------------EDNEE

Query:  EEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENW
        E++ EEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + +NW
Subjt:  EEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENW

Query:  PVFWQSIWGGSNKK
        PVFW+SIWGGSNKK
Subjt:  PVFWQSIWGGSNKK

XP_038877162.1 protein PAM68, chloroplastic isoform X1 [Benincasa hispida]1.1e-6065.07Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLRQ-----------------------EDNEEEEDNE
        MAAI+GSLNLPLAPSNL   RIK +NC+ SIH+KSYERNCFP   P+INQ +  TN  T+LNATLR+                       E  +E+ED E
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLRQ-----------------------EDNEEEEDNE

Query:  EEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENWPVFWQ
        EEEGGVIPEVVTNRM+SRMGF+VGIPL IGLLFFPFFYYLKV LKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + +NWPVFWQ
Subjt:  EEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENWPVFWQ

Query:  SIWGGSNKK
        S+WGGSNKK
Subjt:  SIWGGSNKK

TrEMBL top hitse value%identityAlignment
A0A0A0L507 Uncharacterized protein8.2e-7071.5Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTI--NQNQTRTNHPTSLNATLRQ--------------------------EDNEE
        MAAIAGSLNLPLAPSNLPLLRIK KNC+FS+HIKS ERNCFPN RPTI  NQNQT TN PTSLNATLR+                          E+ EE
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTI--NQNQTRTNHPTSLNATLRQ--------------------------EDNEE

Query:  EEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENW
        E++ EEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + +NW
Subjt:  EEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENW

Query:  PVFWQSIWGGSNKK
        PVFW+SIWGGSNKK
Subjt:  PVFWQSIWGGSNKK

A0A1S3BKQ0 protein PAM68, chloroplastic isoform X16.7e-8076.5Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-------------------------------QED
        MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR                               +ED
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-------------------------------QED

Query:  NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSS
        NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + 
Subjt:  NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSS

Query:  ENWPVFWQSIWGGSNKK
        +NWPVFWQSIWGGSNKK
Subjt:  ENWPVFWQSIWGGSNKK

A0A1S3BKY8 protein PAM68, chloroplastic isoform X26.3e-7876.04Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-------------------------------QED
        MAAIAGSLNLPLAPSNLPLLRIK KNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR                               +ED
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-------------------------------QED

Query:  NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSS
        NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + 
Subjt:  NEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSS

Query:  ENWPVFWQSIWGGSNKK
        +NWPVFWQSIWGGSNKK
Subjt:  ENWPVFWQSIWGGSNKK

A0A6J1CUC6 protein PAM68, chloroplastic8.5e-5964.11Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-----------------------QEDNEEEEDNE
        MAAIAGSLNLPLAPSNLP LRIK +NC+FSIH KS+ER  FP  RP+I QNQTR N P  L ATLR                       ++++E+E+++E
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR-----------------------QEDNEEEEDNE

Query:  EEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENWPVFWQ
        E EGGVIPEVVTNRMMSRMGF+VGIPL IGLLFFPFFYYLKVGLKIDVP+WVP IVSFFFFGSALLGVSYG            SLL    + +NWPVFWQ
Subjt:  EEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENWPVFWQ

Query:  SIWGGSNKK
        SIW  S+KK
Subjt:  SIWGGSNKK

A0A6J1GB37 protein PAM68, chloroplastic1.8e-5361.5Show/hide
Query:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR--------------------------QEDNEEEE
        MAAI GSLNLPLAPS LP L I  +N   SI  KS +RN F   RP++ QNQTRTNH   +NATLR                           ED E+EE
Subjt:  MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLR--------------------------QEDNEEEE

Query:  DNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENWPV
        + EEE+ GVIPEVVTNRM+SRMGF+VGIPL IGLLFFPFFYYLKV LKIDVPSWVPVIVSFFFFGSALLGVSYG            SLL    + +NWPV
Subjt:  DNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG---------SGKSLLVLGMSSENWPV

Query:  FWQSIW-GGSNKK
        FWQSIW GGSNKK
Subjt:  FWQSIW-GGSNKK

SwissProt top hitse value%identityAlignment
O49668 Protein PAM68, chloroplastic2.6e-3659.56Show/hide
Query:  RTNHPTSLNATLRQEDNEEEEDNEEE---EGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG--
        ++  P   N +   +D+E+E+D++EE   E GVIPE+VTNRM+SRMGFTVG+PLFIGLLFFPFFYYLKVGLK+DVP+WVP IVSF FFG+AL GVSYG  
Subjt:  RTNHPTSLNATLRQEDNEEEEDNEEE---EGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG--

Query:  -------SGKSLLVLGMSSENWPVFWQSIWGGSNKK
                  SLL    + +NWPVFWQS W  S+K+
Subjt:  -------SGKSLLVLGMSSENWPVFWQSIWGGSNKK

Q9LTD9 Uncharacterized protein PAM68-like1.6e-0633.93Show/hide
Query:  RQEDNEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGS---------GKSLLVL
        R  +     D + E+   IP+ V  RMM R+  +VG PL +G+        LK     DVP WVP + +   FGS+ LG++YGS           SL  L
Subjt:  RQEDNEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGS---------GKSLLVL

Query:  GMSSENWPVFWQ
          + ENW   W+
Subjt:  GMSSENWPVFWQ

Arabidopsis top hitse value%identityAlignment
AT4G19100.1 Protein of unknown function (DUF3464)1.8e-3759.56Show/hide
Query:  RTNHPTSLNATLRQEDNEEEEDNEEE---EGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG--
        ++  P   N +   +D+E+E+D++EE   E GVIPE+VTNRM+SRMGFTVG+PLFIGLLFFPFFYYLKVGLK+DVP+WVP IVSF FFG+AL GVSYG  
Subjt:  RTNHPTSLNATLRQEDNEEEEDNEEE---EGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYG--

Query:  -------SGKSLLVLGMSSENWPVFWQSIWGGSNKK
                  SLL    + +NWPVFWQS W  S+K+
Subjt:  -------SGKSLLVLGMSSENWPVFWQSIWGGSNKK

AT5G52780.1 Protein of unknown function (DUF3464)1.2e-0733.93Show/hide
Query:  RQEDNEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGS---------GKSLLVL
        R  +     D + E+   IP+ V  RMM R+  +VG PL +G+        LK     DVP WVP + +   FGS+ LG++YGS           SL  L
Subjt:  RQEDNEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGS---------GKSLLVL

Query:  GMSSENWPVFWQ
          + ENW   W+
Subjt:  GMSSENWPVFWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCATTGCCGGATCTCTCAACCTTCCTCTTGCGCCTTCAAACCTTCCATTACTCCGCATTAAGCAGAAAAATTGTGAATTCTCAATCCATATAAAAAGCTACGA
AAGAAATTGTTTTCCAAATTTTAGACCAACCATTAACCAAAACCAAACTCGCACGAACCATCCCACGAGTTTAAATGCAACATTGAGGCAGGAAGACAACGAGGAAGAGG
AAGACAACGAGGAAGAGGAAGGTGGTGTAATACCAGAAGTAGTGACAAATAGGATGATGAGTAGAATGGGATTTACGGTGGGGATTCCATTGTTTATAGGGCTATTGTTC
TTCCCATTCTTCTATTACCTCAAAGTTGGGCTGAAGATTGATGTGCCCTCATGGGTGCCAGTCATAGTCTCATTCTTCTTCTTTGGCTCAGCTCTTTTGGGAGTTAGCTA
TGGGAGTGGTAAATCTTTATTGGTCTTGGGAATGAGCTCAGAAAATTGGCCTGTTTTTTGGCAGTCCATTTGGGGTGGATCTAATAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCATTGCCGGATCTCTCAACCTTCCTCTTGCGCCTTCAAACCTTCCATTACTCCGCATTAAGCAGAAAAATTGTGAATTCTCAATCCATATAAAAAGCTACGA
AAGAAATTGTTTTCCAAATTTTAGACCAACCATTAACCAAAACCAAACTCGCACGAACCATCCCACGAGTTTAAATGCAACATTGAGGCAGGAAGACAACGAGGAAGAGG
AAGACAACGAGGAAGAGGAAGGTGGTGTAATACCAGAAGTAGTGACAAATAGGATGATGAGTAGAATGGGATTTACGGTGGGGATTCCATTGTTTATAGGGCTATTGTTC
TTCCCATTCTTCTATTACCTCAAAGTTGGGCTGAAGATTGATGTGCCCTCATGGGTGCCAGTCATAGTCTCATTCTTCTTCTTTGGCTCAGCTCTTTTGGGAGTTAGCTA
TGGGAGTGGTAAATCTTTATTGGTCTTGGGAATGAGCTCAGAAAATTGGCCTGTTTTTTGGCAGTCCATTTGGGGTGGATCTAATAAGAAATAG
Protein sequenceShow/hide protein sequence
MAAIAGSLNLPLAPSNLPLLRIKQKNCEFSIHIKSYERNCFPNFRPTINQNQTRTNHPTSLNATLRQEDNEEEEDNEEEEGGVIPEVVTNRMMSRMGFTVGIPLFIGLLF
FPFFYYLKVGLKIDVPSWVPVIVSFFFFGSALLGVSYGSGKSLLVLGMSSENWPVFWQSIWGGSNKK