CuGenDBv2

Gene ID	Pay0001914
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Genome location	chr05:25096918..25109164
RNA-Seq Expression	Pay0001914
Synteny	Pay0001914
Gene Ontology terms	GO:0090304 - nucleic acid metabolic process (biological process) GO:0016740 - transferase activity (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR005162 - Retrotransposon gag domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025242.1 pol protein [Cucumis melo var. makuwa]

1.2e-215

71.24

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

KAA0032535.1 pol protein [Cucumis melo var. makuwa]

3.5e-215

71.07

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

KAA0033825.1 pol protein [Cucumis melo var. makuwa]

3.5e-215

71.07

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

TYK01576.1 pol protein [Cucumis melo var. makuwa]

3.5e-215

71.07

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

TYK20443.1 pol protein [Cucumis melo var. makuwa]

3.5e-215

71.07

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TSL0 Reverse transcriptase

5.7e-216

71.24

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

A0A5A7UBH7 Reverse transcriptase

1.7e-215

71.07

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

A0A5A7UBS1 Reverse transcriptase

1.7e-215

71.07

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

A0A5D3BTN0 Reverse transcriptase

1.7e-215

71.07

Show/hide

Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

A0A5D3CQB5 Reverse transcriptase

1.7e-215

71.07

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Query:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
        MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE
Subjt:  MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPE

Query:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
        DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG
Subjt:  DQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRG

Query:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------
        LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDV PQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR      
Subjt:  LRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGR------

Query:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------
                                             GRVFATTRQEAERAGTVVT                                            
Subjt:  -------------------------------------GRVFATTRQEAERAGTVVT--------------------------------------------

Query:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----
                                                              DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ    
Subjt:  ------------------------------------------------------DCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQ----

Query:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
                                     DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD
Subjt:  -----------------------------DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD

Query:  GSMRL
        GSMRL
Subjt:  GSMRL

SwissProt top hits

e value

%identity

Alignment

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

9.4e-06

39.47

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Query:  PPREVDF-------AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
        PPR  D         IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RL
Subjt:  PPREVDF-------AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL

Q99315 Transposon Ty3-G Gag-Pol polyprotein

9.4e-06

39.47

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Query:  PPREVDF-------AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
        PPR  D         IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RL
Subjt:  PPREVDF-------AIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL

Q9BXR3 Endogenous retrovirus group K member 6 Pol protein

8.8e-04

29.89

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Query:  KASKLLSQDELPG---LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
        K+ K  +++ L G   + PP+ +    + E    P+    + +   +L+ L +   E L+KG I PS SPW +PV  ++KK G  R+
Subjt:  KASKLLSQDELPG---LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCTGCAAGCTGCTTTGGCGCCTTTCCTTGCCGCCCAGCAGAACCAGGCCGCCCCTGTTCAGGCCGAGGCCGCCCCTGCTCAGGCCCAGGCCGCCCCTGTTCAGGCTCA
GGCCGTCGCTCCTCCAGCCCCTGAGGAAGCTCAACCAGTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGATTTCAGGAAGTATAATCCCAAGACCTTTGACG
GATCCATGGACAACCCCACAAAGGCCCAAATGTGGTTGACGTCCATAGAGACTATTTTCCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTC
TTGGAGGACAGGGGCACCGCCTGGTGGGAGACCGCGGAGAGAATGCTAGGGGGCGATGTAAGCAAAATAACATGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTTTT
CTCCGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTC
CCGATATGGTAAGAGATGAGGCTGCCAGGACGGAGAAATTTGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCA
CTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGT
AGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCGCTTGTACTACCTGCGGGA
GAGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGACTGTTATGGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTC
AAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGT
AGACTTCGCTATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCTGAGCTAAAGGAGTTAAAGGTCCAGTTACAGGAGTTGCTGG
ACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTTCCTTACAGTGCCATATGGGTCTGGA
AGTTTTATGATCTTCAATGACGCCTTCAAGAAAGAACTGGATTGTGTTTTGATGTAG

mRNA sequence

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Protein sequence

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MLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFF
LEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADA
LRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRGRVFATTRQEAERAGTVVTDCYGKEVVFNPPSEASF
KFRGAGMVCIPKVISAMKASKLLSQDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLFLTVPYGSG
SFMIFNDAFKKELDCVLM

Pay0001914 (gene) of Melon (Payzawat) v1 genome