; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0001951 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001951
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr01:10817909..10820507
RNA-Seq ExpressionPay0001951
SyntenyPay0001951
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035021.1 uncharacterized protein E6C27_scaffold57G00710 [Cucumis melo var. makuwa]1.0e-9866.78Show/hide
Query:  KALYELNDFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL-------------------IGESAAPVSPAVRAHRASEATVLDMDS
        + L  ++DFGMMYSYDTT TLVGYCDADW GS DDRKS S GCFFLGNNLISWL                   +GESAAPVSPAV AHRASEATV DMDS
Subjt:  KALYELNDFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL-------------------IGESAAPVSPAVRAHRASEATVLDMDS

Query:  DDQDNVSLIRLLKKPSGLVTAERLPSDP--------------------------SAIPLGHSPSVHPPRSKLPISQPDV--TEIPLEDIPPPTDDPIAPS
        DD DNV LIRLLKKPSG VTAERLPSDP                           AIP GHSP VHPPRSKLP S+PDV  TEIP EDIPPPTDDPIAPS
Subjt:  DDQDNVSLIRLLKKPSGLVTAERLPSDP--------------------------SAIPLGHSPSVHPPRSKLPISQPDV--TEIPLEDIPPPTDDPIAPS

Query:  SEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRG
        SEGRP+ PKGPKPP    KRKTQQ            KIPANVPSVPIDGISFHH+ESVQ WKF+MQRRI DELIREFI+NL D+FNDPSS DYQTV+IRG
Subjt:  SEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRG

Query:  FQICDFP
        F+    P
Subjt:  FQICDFP

KAA0056181.1 uncharacterized protein E6C27_scaffold431G00070 [Cucumis melo var. makuwa]2.1e-8041.65Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL-------------------------------------------------NDFGMMYS
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYK+NKALY L                                                 +DFGMMYS
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL-------------------------------------------------NDFGMMYS

Query:  YDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLIS-----------------------------WL-------------------------------
        YD T TL GYCDADWAGS DDRKS S GCFFLGNNLIS                             W+                               
Subjt:  YDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLIS-----------------------------WL-------------------------------

Query:  ------------------------------------------------------------------------------------IGESAAPVSPAVRAHR
                                                                                            + E AAPVSP V AHR
Subjt:  ------------------------------------------------------------------------------------IGESAAPVSPAVRAHR

Query:  ASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDV-------------------------------TEIPL
        ASEAT                   KPS  VT +RLPSDP     GHSPSVHP RSKLP SQPD                                TEIP 
Subjt:  ASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDV-------------------------------TEIPL

Query:  EDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFN
        EDIPP TDDPIAPSSEGRP++PKGPKPP    KRKTQQ            KI  NVPSVPIDGISFHHEESVQCWKFVMQRRI DELIREFI+NL DEF 
Subjt:  EDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFN

Query:  DPSSPDYQTVHIRGFQICDFP
        DPSS  YQTVHI GF+    P
Subjt:  DPSSPDYQTVHIRGFQICDFP

TYK03343.1 uncharacterized protein E5676_scaffold206G00060 [Cucumis melo var. makuwa]8.8e-7943.7Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL-------------------------------------------------NDFGMMYS
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYK+NKALY L                                                 +DFGMMYS
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL-------------------------------------------------NDFGMMYS

Query:  YDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL----------IGE-------------------------------------SAAPVSPAVR
        YD T TL GYCDADWAGS DDRKS S GCFFLGNNLIS L          I E                                     SA  +S  + 
Subjt:  YDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL----------IGE-------------------------------------SAAPVSPAVR

Query:  AHRAS--------------EATVLDMD----------------------SDDQDNV------------SLIRLLK--------------------KPSGL
         H  +              E  V+ +D                      S+D  N             +  RL +                    KPS  
Subjt:  AHRAS--------------EATVLDMD----------------------SDDQDNV------------SLIRLLK--------------------KPSGL

Query:  VTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDV-------------------------------TEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPP
        VT +RLPSDP     GHSPSVHP RSKLP SQPD                                TEIP EDIPP TDDPIAPSSEGRP++PKGPKPP 
Subjt:  VTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDV-------------------------------TEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPP

Query:  KKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP
           KRKTQQ            KI  NVPSVPIDGISFHHEESVQCWKFVMQRRI DELIREFI+NL DEF DPSS  YQTVHI GF+    P
Subjt:  KKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP

TYK12391.1 uncharacterized protein E5676_scaffold302G001740 [Cucumis melo var. makuwa]1.5e-7848.35Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL------------------------------------------------NDFGMMYSY
        MDVKSAFLN YLNEEVYVAQPKGFVDSEHPKHVYKLNKALY L                                                +DFGMMYSY
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL------------------------------------------------NDFGMMYSY

Query:  DTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL------------------------------------------------------------I
        DTT TLVGYCDADWAGS DD+KS   GCFFLGNNLISW                                                             +
Subjt:  DTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL------------------------------------------------------------I

Query:  GESAAPVSPAVRAHRASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDVTEIPLEDIPPPTDDPIAPSSE
        GESAAPVS A+ A RASEATV DMDSDDQD+V L+RLLKKPS     ERLPSDP                   I   + + I    IP P D   +P+  
Subjt:  GESAAPVSPAVRAHRASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDVTEIPLEDIPPPTDDPIAPSSE

Query:  GRPKFPKGPKPPPKKKKRKTQQKIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP
             P G K            KIPAN+P +PIDGISFHHEESVQ WKFVMQRRIADELIRE I+NL DEFNDPSS DYQTVHIRGF+    P
Subjt:  GRPKFPKGPKPPPKKKKRKTQQKIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP

XP_008463111.1 PREDICTED: uncharacterized protein LOC103501338 [Cucumis melo]9.3e-12170Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYELN------DFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL---
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEH KHVYKLNKALY L       DFGMMYSYDTT TLVGYCDADW GS DDRKS S GCFFLGNNLISWL   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYELN------DFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL---

Query:  ----------------IGESAAPVSPAVRAHRASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDP--------------------------SAI
                        +GESAAPVSPAV AHRASEATV DMDSDD DNV LIRLLKKPSG VTAERLPSDP                           AI
Subjt:  ----------------IGESAAPVSPAVRAHRASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDP--------------------------SAI

Query:  PLGHSPSVHPPRSKLPISQPDV--TEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEES
        P GHSP VHPPRSKLP S+PDV  TEIP EDIPPPTDDPIAPSSEGRP+ PKGPKPP    KRKTQQ            KIPANVPSVPIDGISFHH+ES
Subjt:  PLGHSPSVHPPRSKLPISQPDV--TEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEES

Query:  VQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP
        VQ WKF+MQRRI DELIREFI+NL D+FNDPSS DYQTV+IRGF+    P
Subjt:  VQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP

TrEMBL top hitse value%identityAlignment
A0A1S3CK09 uncharacterized protein LOC1035013384.5e-12170Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYELN------DFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL---
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEH KHVYKLNKALY L       DFGMMYSYDTT TLVGYCDADW GS DDRKS S GCFFLGNNLISWL   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYELN------DFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL---

Query:  ----------------IGESAAPVSPAVRAHRASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDP--------------------------SAI
                        +GESAAPVSPAV AHRASEATV DMDSDD DNV LIRLLKKPSG VTAERLPSDP                           AI
Subjt:  ----------------IGESAAPVSPAVRAHRASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDP--------------------------SAI

Query:  PLGHSPSVHPPRSKLPISQPDV--TEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEES
        P GHSP VHPPRSKLP S+PDV  TEIP EDIPPPTDDPIAPSSEGRP+ PKGPKPP    KRKTQQ            KIPANVPSVPIDGISFHH+ES
Subjt:  PLGHSPSVHPPRSKLPISQPDV--TEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEES

Query:  VQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP
        VQ WKF+MQRRI DELIREFI+NL D+FNDPSS DYQTV+IRGF+    P
Subjt:  VQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP

A0A5A7T093 Reverse transcriptase Ty1/copia-type domain-containing protein4.9e-9966.78Show/hide
Query:  KALYELNDFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL-------------------IGESAAPVSPAVRAHRASEATVLDMDS
        + L  ++DFGMMYSYDTT TLVGYCDADW GS DDRKS S GCFFLGNNLISWL                   +GESAAPVSPAV AHRASEATV DMDS
Subjt:  KALYELNDFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL-------------------IGESAAPVSPAVRAHRASEATVLDMDS

Query:  DDQDNVSLIRLLKKPSGLVTAERLPSDP--------------------------SAIPLGHSPSVHPPRSKLPISQPDV--TEIPLEDIPPPTDDPIAPS
        DD DNV LIRLLKKPSG VTAERLPSDP                           AIP GHSP VHPPRSKLP S+PDV  TEIP EDIPPPTDDPIAPS
Subjt:  DDQDNVSLIRLLKKPSGLVTAERLPSDP--------------------------SAIPLGHSPSVHPPRSKLPISQPDV--TEIPLEDIPPPTDDPIAPS

Query:  SEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRG
        SEGRP+ PKGPKPP    KRKTQQ            KIPANVPSVPIDGISFHH+ESVQ WKF+MQRRI DELIREFI+NL D+FNDPSS DYQTV+IRG
Subjt:  SEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRG

Query:  FQICDFP
        F+    P
Subjt:  FQICDFP

A0A5A7URM6 Reverse transcriptase Ty1/copia-type domain-containing protein1.0e-8041.65Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL-------------------------------------------------NDFGMMYS
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYK+NKALY L                                                 +DFGMMYS
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL-------------------------------------------------NDFGMMYS

Query:  YDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLIS-----------------------------WL-------------------------------
        YD T TL GYCDADWAGS DDRKS S GCFFLGNNLIS                             W+                               
Subjt:  YDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLIS-----------------------------WL-------------------------------

Query:  ------------------------------------------------------------------------------------IGESAAPVSPAVRAHR
                                                                                            + E AAPVSP V AHR
Subjt:  ------------------------------------------------------------------------------------IGESAAPVSPAVRAHR

Query:  ASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDV-------------------------------TEIPL
        ASEAT                   KPS  VT +RLPSDP     GHSPSVHP RSKLP SQPD                                TEIP 
Subjt:  ASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDV-------------------------------TEIPL

Query:  EDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFN
        EDIPP TDDPIAPSSEGRP++PKGPKPP    KRKTQQ            KI  NVPSVPIDGISFHHEESVQCWKFVMQRRI DELIREFI+NL DEF 
Subjt:  EDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFN

Query:  DPSSPDYQTVHIRGFQICDFP
        DPSS  YQTVHI GF+    P
Subjt:  DPSSPDYQTVHIRGFQICDFP

A0A5D3BUJ1 Reverse transcriptase Ty1/copia-type domain-containing protein4.3e-7943.7Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL-------------------------------------------------NDFGMMYS
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYK+NKALY L                                                 +DFGMMYS
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL-------------------------------------------------NDFGMMYS

Query:  YDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL----------IGE-------------------------------------SAAPVSPAVR
        YD T TL GYCDADWAGS DDRKS S GCFFLGNNLIS L          I E                                     SA  +S  + 
Subjt:  YDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL----------IGE-------------------------------------SAAPVSPAVR

Query:  AHRAS--------------EATVLDMD----------------------SDDQDNV------------SLIRLLK--------------------KPSGL
         H  +              E  V+ +D                      S+D  N             +  RL +                    KPS  
Subjt:  AHRAS--------------EATVLDMD----------------------SDDQDNV------------SLIRLLK--------------------KPSGL

Query:  VTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDV-------------------------------TEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPP
        VT +RLPSDP     GHSPSVHP RSKLP SQPD                                TEIP EDIPP TDDPIAPSSEGRP++PKGPKPP 
Subjt:  VTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDV-------------------------------TEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPP

Query:  KKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP
           KRKTQQ            KI  NVPSVPIDGISFHHEESVQCWKFVMQRRI DELIREFI+NL DEF DPSS  YQTVHI GF+    P
Subjt:  KKKKRKTQQ------------KIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP

A0A5D3CKP6 Reverse transcriptase Ty1/copia-type domain-containing protein7.3e-7948.35Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL------------------------------------------------NDFGMMYSY
        MDVKSAFLN YLNEEVYVAQPKGFVDSEHPKHVYKLNKALY L                                                +DFGMMYSY
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL------------------------------------------------NDFGMMYSY

Query:  DTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL------------------------------------------------------------I
        DTT TLVGYCDADWAGS DD+KS   GCFFLGNNLISW                                                             +
Subjt:  DTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWL------------------------------------------------------------I

Query:  GESAAPVSPAVRAHRASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDVTEIPLEDIPPPTDDPIAPSSE
        GESAAPVS A+ A RASEATV DMDSDDQD+V L+RLLKKPS     ERLPSDP                   I   + + I    IP P D   +P+  
Subjt:  GESAAPVSPAVRAHRASEATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDVTEIPLEDIPPPTDDPIAPSSE

Query:  GRPKFPKGPKPPPKKKKRKTQQKIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP
             P G K            KIPAN+P +PIDGISFHHEESVQ WKFVMQRRIADELIRE I+NL DEFNDPSS DYQTVHIRGF+    P
Subjt:  GRPKFPKGPKPPPKKKKRKTQQKIPANVPSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFP

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1613.3e-0435.71Show/hide
Query:  FVDSEHPKHVYKLNKALYELND---FGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISW
        F     P H   L + L  L     +G+ ++   T+ LVGY DADWAG  + R+S S   F L    +SW
Subjt:  FVDSEHPKHVYKLNKALYELND---FGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISW

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-0453.49Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL
        +DVK+AFL+G L EE+Y+ QP+GF  +     V KLNK+LY L
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL

P25600 Putative transposon Ty5-1 protein YCL074W4.6e-0637.5Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYELNDFGMMYSYDTTSTL--VGYC
        MDV +AFLN  ++E +YV QP GFV+  +P +V++L   +Y L    ++++    +TL  +G+C
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYELNDFGMMYSYDTTSTL--VGYC

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-0653.49Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL
        +DV +AFL G L ++VY++QP GF+D + P +V KL KALY L
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.7e-0653.49Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL
        +DV +AFL G L +EVY++QP GFVD + P +V +L KA+Y L
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYEL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.3e-0335.82Show/hide
Query:  DFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWLIGESAAPVSPAVRAHRASEA
        D G+      T +L  Y DADWAG TDD  S +    +LG++ ISW   +    V  +  A   S A
Subjt:  DFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWLIGESAAPVSPAVRAHRASEA

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.5e-0435.38Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFV----DSEHPKHVYKLNKALYELNDFGMMYSYDTTSTLVGY
        +D+ +AFLNG L+EE+Y+  P G+     DS  P  V  L K++Y L      +    + TL+G+
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFV----DSEHPKHVYKLNKALYELNDFGMMYSYDTTSTLVGY

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-0440.91Show/hide
Query:  GMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISW
        G+    ++   +  +CD+DWAG T  R+S +  C FLG N+ISW
Subjt:  GMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTAAAGAGTGCTTTCTTAAATGGGTACTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTAGATTCTGAGCATCCGAAGCATGTGTATAAGCTCAA
TAAAGCCTTATATGAACTAAATGACTTTGGAATGATGTATTCCTATGATACCACTTCCACTTTAGTTGGATATTGTGATGCTGACTGGGCAGGTTCAACTGATGATCGTA
AAAGTAGGTCTGAAGGTTGCTTCTTTTTGGGAAACAATTTAATCTCTTGGTTAATCGGGGAGTCTGCTGCTCCTGTCTCTCCTGCTGTACGTGCACATCGAGCTTCTGAG
GCCACTGTATTGGATATGGATTCAGATGATCAAGATAATGTTTCGTTAATTCGTTTGTTAAAGAAACCCTCAGGGCTAGTTACAGCCGAGAGGCTCCCTTCTGATCCCTC
GGCTATACCTTTAGGTCATTCTCCCTCTGTTCACCCTCCTCGATCGAAACTACCTATTTCGCAACCGGATGTTACTGAGATACCTCTTGAAGACATTCCTCCACCTACTG
ATGATCCCATTGCACCATCTTCTGAAGGAAGGCCAAAGTTTCCTAAAGGTCCTAAACCCCCCCCAAAAAAGAAAAAAAGAAAAACTCAACAAAAAATCCCTGCAAATGTT
CCATCTGTTCCCATTGATGGAATATCGTTTCATCATGAAGAGAGTGTCCAGTGTTGGAAGTTTGTGATGCAGAGGAGAATTGCTGATGAGCTAATTAGAGAATTTATCAT
CAATCTGTCTGATGAGTTTAATGATCCAAGTAGTCCGGATTATCAGACAGTGCACATTAGAGGGTTTCAAATTTGTGATTTCCCCTGCTGTGATAAATGGGTTTCTTGGA
AATACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTAAAGAGTGCTTTCTTAAATGGGTACTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTAGATTCTGAGCATCCGAAGCATGTGTATAAGCTCAA
TAAAGCCTTATATGAACTAAATGACTTTGGAATGATGTATTCCTATGATACCACTTCCACTTTAGTTGGATATTGTGATGCTGACTGGGCAGGTTCAACTGATGATCGTA
AAAGTAGGTCTGAAGGTTGCTTCTTTTTGGGAAACAATTTAATCTCTTGGTTAATCGGGGAGTCTGCTGCTCCTGTCTCTCCTGCTGTACGTGCACATCGAGCTTCTGAG
GCCACTGTATTGGATATGGATTCAGATGATCAAGATAATGTTTCGTTAATTCGTTTGTTAAAGAAACCCTCAGGGCTAGTTACAGCCGAGAGGCTCCCTTCTGATCCCTC
GGCTATACCTTTAGGTCATTCTCCCTCTGTTCACCCTCCTCGATCGAAACTACCTATTTCGCAACCGGATGTTACTGAGATACCTCTTGAAGACATTCCTCCACCTACTG
ATGATCCCATTGCACCATCTTCTGAAGGAAGGCCAAAGTTTCCTAAAGGTCCTAAACCCCCCCCAAAAAAGAAAAAAAGAAAAACTCAACAAAAAATCCCTGCAAATGTT
CCATCTGTTCCCATTGATGGAATATCGTTTCATCATGAAGAGAGTGTCCAGTGTTGGAAGTTTGTGATGCAGAGGAGAATTGCTGATGAGCTAATTAGAGAATTTATCAT
CAATCTGTCTGATGAGTTTAATGATCCAAGTAGTCCGGATTATCAGACAGTGCACATTAGAGGGTTTCAAATTTGTGATTTCCCCTGCTGTGATAAATGGGTTTCTTGGA
AATACTGTTGA
Protein sequenceShow/hide protein sequence
MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYELNDFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEGCFFLGNNLISWLIGESAAPVSPAVRAHRASE
ATVLDMDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSAIPLGHSPSVHPPRSKLPISQPDVTEIPLEDIPPPTDDPIAPSSEGRPKFPKGPKPPPKKKKRKTQQKIPANV
PSVPIDGISFHHEESVQCWKFVMQRRIADELIREFIINLSDEFNDPSSPDYQTVHIRGFQICDFPCCDKWVSWKYC