; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0001958 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001958
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationchr03:22842153..22844566
RNA-Seq ExpressionPay0001958
SyntenyPay0001958
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036507.1 glycine-rich RNA-binding family protein [Cucumis melo var. makuwa]2.0e-17199.34Show/hide
Query:  MQKNLKIDFAVWLFNEISRRNSVYMDKLRIAFQARNVINALLYLLRAVQWWWSNFSRSIEMLSWILSLEGNLCNKVQVVGHTVEIMLERDTGRPRGFGFI
        MQKNLKIDFAVWLFNEISRRNSVYMDKLRIAFQARNVINALLYLLRAVQWWWSNFSRSIEMLSWILSLEGNLCNKVQVVGHTVEIMLERDTGRPRGFGFI
Subjt:  MQKNLKIDFAVWLFNEISRRNSVYMDKLRIAFQARNVINALLYLLRAVQWWWSNFSRSIEMLSWILSLEGNLCNKVQVVGHTVEIMLERDTGRPRGFGFI

Query:  TFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRS
        TFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKC RPGHWARDYPSVGGERGGGRGSFSSRS
Subjt:  TFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRS

Query:  RFDSDGRGDRFGGDRDRYVDDHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDREVLTLPPASDILVLNVVNYSAAPVDFDL
        RFDSDGRGDRFGGDRDRYVDD YNGGAIWYPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDREVLTLPPASDILVLNVVNYSAAPVDFDL
Subjt:  RFDSDGRGDRFGGDRDRYVDDHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDREVLTLPPASDILVLNVVNYSAAPVDFDL

Query:  FFS
        FFS
Subjt:  FFS

XP_004150370.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus]6.0e-9177.87Show/hide
Query:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG
        LSW +S E  L N     G  +E  IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQEL ERIISVNKAEPKME DDTE GFRGGGYSS GRASFGRG
Subjt:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG

Query:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRF
        KD+SVGQDECFKCGRPGHWARD PSVGG RGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVD+ YNGG                         YPSAGDRF
Subjt:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRF

Query:  TGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDR
        TGSDRYDVS+RYPQNGYVKDR YDRDIGPRSGSDR
Subjt:  TGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDR

XP_031737122.1 glycine-rich RNA-binding protein RZ1C isoform X2 [Cucumis sativus]3.0e-9082.46Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP
        +IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQEL ERIISVNKAEPKME DDTE GFRGGGYSS GRASFGRGKD+SVGQDECFKCGRPGHWARD P
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP

Query:  SVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYD
        SVGG RGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVD+ YNGG                         YPSAGDRFTGSDRYDVS+RYPQNGYVKDR YD
Subjt:  SVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYD

Query:  RDIGPRSGSDR
        RDIGPRSGSDR
Subjt:  RDIGPRSGSDR

XP_031737123.1 glycine-rich RNA-binding protein RZ1C isoform X3 [Cucumis sativus]1.9e-8982.78Show/hide
Query:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYPSV
        MLERDTGRPRGFGFITFADRRGMDDAIREMHGQEL ERIISVNKAEPKME DDTE GFRGGGYSS GRASFGRGKD+SVGQDECFKCGRPGHWARD PSV
Subjt:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYPSV

Query:  GGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRD
        GG RGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVD+ YNGG                         YPSAGDRFTGSDRYDVS+RYPQNGYVKDR YDRD
Subjt:  GGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRD

Query:  IGPRSGSDR
        IGPRSGSDR
Subjt:  IGPRSGSDR

XP_038885252.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida]2.4e-8775.74Show/hide
Query:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG
        LSW +S E  L N     G  +E  IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQE  ERIISVNKAEPKME DD EPGFRGGGYSS GRASFGRG
Subjt:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG

Query:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRF
         D+SVGQDECFKCGRPGHWARD PSV G RG GR SFSSRSRFDSDGRGDRFGGDRDRYVDD YNGG                         YPSAGDRF
Subjt:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRF

Query:  TGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDR
         G DRYDVS+RYPQNGYVKDRGYDRDIGPRSGSDR
Subjt:  TGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDR

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein2.9e-9177.87Show/hide
Query:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG
        LSW +S E  L N     G  +E  IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQEL ERIISVNKAEPKME DDTE GFRGGGYSS GRASFGRG
Subjt:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG

Query:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRF
        KD+SVGQDECFKCGRPGHWARD PSVGG RGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVD+ YNGG                         YPSAGDRF
Subjt:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRF

Query:  TGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDR
        TGSDRYDVS+RYPQNGYVKDR YDRDIGPRSGSDR
Subjt:  TGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDR

A0A5A7T4L2 Glycine-rich RNA-binding family protein9.8e-17299.34Show/hide
Query:  MQKNLKIDFAVWLFNEISRRNSVYMDKLRIAFQARNVINALLYLLRAVQWWWSNFSRSIEMLSWILSLEGNLCNKVQVVGHTVEIMLERDTGRPRGFGFI
        MQKNLKIDFAVWLFNEISRRNSVYMDKLRIAFQARNVINALLYLLRAVQWWWSNFSRSIEMLSWILSLEGNLCNKVQVVGHTVEIMLERDTGRPRGFGFI
Subjt:  MQKNLKIDFAVWLFNEISRRNSVYMDKLRIAFQARNVINALLYLLRAVQWWWSNFSRSIEMLSWILSLEGNLCNKVQVVGHTVEIMLERDTGRPRGFGFI

Query:  TFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRS
        TFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKC RPGHWARDYPSVGGERGGGRGSFSSRS
Subjt:  TFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRS

Query:  RFDSDGRGDRFGGDRDRYVDDHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDREVLTLPPASDILVLNVVNYSAAPVDFDL
        RFDSDGRGDRFGGDRDRYVDD YNGGAIWYPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDREVLTLPPASDILVLNVVNYSAAPVDFDL
Subjt:  RFDSDGRGDRFGGDRDRYVDDHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDREVLTLPPASDILVLNVVNYSAAPVDFDL

Query:  FFS
        FFS
Subjt:  FFS

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X14.1e-8573.73Show/hide
Query:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG
        LSW +S E  L N     G  +E  IMLERDTGRPRGFGFITFADRRGMDDAIREMHG+EL ER ISVNKAEPKME DD EPGFRGGGYSS GR SFGRG
Subjt:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG

Query:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRF
         D+SVGQDECFKCGRPGHWARD PSVGG RG GRGSFSSRSRFDSD RGDRFGGDRDRYVDD Y+GG                         YPS GDRF
Subjt:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW----------------------YPSAGDRF

Query:  TGSDRYDVSNRYPQNGYVKDR-GYDRDIGPRSGSDR
         G DRYDVS+RYPQNGYVKDR GY+RDIGPRSGSDR
Subjt:  TGSDRYDVSNRYPQNGYVKDR-GYDRDIGPRSGSDR

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like6.3e-8673.33Show/hide
Query:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG
        LSW +S E  L N     G  +E  IMLERDTGRPRGFGFITFADRRGMDDAIREMHG E  ERIISVNKAEPKME DD EPGFRGGGYSS GRASFGRG
Subjt:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG

Query:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW--------------------------YPSA
         D+SVGQDECFKCGRPGHWARD PS GG RG GRGSFSSRSRFD D RGDRFGGDRDRYVDD Y+GG                             YPSA
Subjt:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW--------------------------YPSA

Query:  GDRFTGSDRYDVSNRYPQNGYVKDR-GYDRDIGPRSGSDR
        GDRFTG DRYDVS+RYPQNGYVKDR GYDRDIGPRSGSDR
Subjt:  GDRFTGSDRYDVSNRYPQNGYVKDR-GYDRDIGPRSGSDR

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C2.4e-8572.92Show/hide
Query:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG
        LSW +S E  L N     G  +E  IMLERDTGRPRGFGFITFADRRGMDDAIREMHG E  ERIISVNKAEPKME DD EPGFRGGGYSS GRASFGRG
Subjt:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG

Query:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW--------------------------YPSA
         D+SVGQDECFKCGRPGHWARD PS GG RG GRGSFSSRSRFD D RGDRFGGDRDRYVDD Y+GG                             YPSA
Subjt:  KDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW--------------------------YPSA

Query:  GDRFTGSDRYDVSNRYPQNGYVKDR-GYDRDIGPRSGSDR
        GDRF G DRYDVS+RYPQNGYVKDR GYDRDIGPRSGSDR
Subjt:  GDRFTGSDRYDVSNRYPQNGYVKDR-GYDRDIGPRSGSDR

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B2.0e-3644.44Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP
        +IM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+EL  ++ISVNKAEPK+  +D +   +GGGYSS G+ +          +DECFKC RPGHWARD P
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP

Query:  SVGGERGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVD-------------DHYNGGAIW----------YPSAGDRFTGSDRYDVSNR
        S G +R   R   + RSR  D DG  DR+G            + DRY+D             D ++ G  +          Y   GDRF  SDRY +   
Subjt:  SVGGERGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVD-------------DHYNGGAIW----------YPSAGDRFTGSDRYDVSNR

Query:  YPQNGY-VKDRGYDRDIGPRSGSDR
        + +N Y  ++R YDRD   R  SDR
Subjt:  YPQNGY-VKDRGYDRDIGPRSGSDR

P49310 Glycine-rich RNA-binding protein GRP1A2.4e-1039.1Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP
        +I+ +R+TGR RGFGF+TF D + M DAI  M+GQ+L  R I+VN+A+ +           GGGY S G   +G G     G       GR G     Y 
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP

Query:  SVGG---ERGGGRGSFSSRSRFDSDGRGDRFGG
          GG    RGGG G +    R D  G G  +GG
Subjt:  SVGG---ERGGGRGSFSSRSRFDSDGRGDRFGG

Q05966 Glycine-rich RNA-binding protein 107.1e-1039.55Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG----KDKSVGQDECFKCGRPGHWA
        +I+ +R+TGR RGFGF+TF D + M DAI EM+G+EL  R I+VN+A+ +        G  GGGY   G   +G G     D+  G    +  G  G   
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG----KDKSVGQDECFKCGRPGHWA

Query:  RDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGG
          Y S GG  GGG G      R D  G G   GG
Subjt:  RDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C7.0e-5052.89Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEP-GFRGG---GYSSSGRASFGRGKDKS--VGQDECFKCGRPGH
        +IMLERDTGR RGFGFITFADRR MD++IREMHG++  +R+ISVN+AEPK+  DD E  G RGG   GYS +G+ SFG G      VG+DECFKCGR GH
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEP-GFRGG---GYSSSGRASFGRGKDKS--VGQDECFKCGRPGH

Query:  WARDYPSVGGERGGGRGSFSSRSRF--DSDGRGDRFGG-----DRDRYVDDHYNGGAIW----------------------YPSAGDRFTGSDRYD-VSN
        WARD PS GG RGG  G FSSR+     SDGR DR+       DR+RY+DD Y+G A +                      Y +  DRF G DRY   S+
Subjt:  WARDYPSVGGERGGGRGSFSSRSRF--DSDGRGDRFGG-----DRDRYVDDHYNGGAIW----------------------YPSAGDRFTGSDRYD-VSN

Query:  RYPQNGYVKDRGYDRDIGPRSGSDR
        RYP   Y K R ++RDI P +GSDR
Subjt:  RYPQNGYVKDRGYDRDIGPRSGSDR

Q9LIN3 Glycine-rich RNA-binding protein RZ1A6.2e-2238.18Show/hide
Query:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKM----EDDDTEPGFRGGGYSSSGRAS
        L+W  S  G L +  +  GH VE  ++L++ +GR RGFGFITF +++ MD+AI  M+G +L  R I+V+KA+P       D+D + G   G      R S
Subjt:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKM----EDDDTEPGFRGGGYSSSGRAS

Query:  FGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRY--VDDHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNG
         GR      G  +CFKCG+PGH+AR+ PS     GGGR S S   R+ S  + DR+G   DRY   +D Y      Y S  DR++  D    S     + 
Subjt:  FGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRY--VDDHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNG

Query:  YVKDRGYDRDIG-PRSGSDR
        Y  DR  +R  G  R G  R
Subjt:  YVKDRGYDRDIG-PRSGSDR

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.4e-3744.44Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP
        +IM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+EL  ++ISVNKAEPK+  +D +   +GGGYSS G+ +          +DECFKC RPGHWARD P
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP

Query:  SVGGERGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVD-------------DHYNGGAIW----------YPSAGDRFTGSDRYDVSNR
        S G +R   R   + RSR  D DG  DR+G            + DRY+D             D ++ G  +          Y   GDRF  SDRY +   
Subjt:  SVGGERGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVD-------------DHYNGGAIW----------YPSAGDRFTGSDRYDVSNR

Query:  YPQNGY-VKDRGYDRDIGPRSGSDR
        + +N Y  ++R YDRD   R  SDR
Subjt:  YPQNGY-VKDRGYDRDIGPRSGSDR

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.4e-3744.44Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP
        +IM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+EL  ++ISVNKAEPK+  +D +   +GGGYSS G+ +          +DECFKC RPGHWARD P
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP

Query:  SVGGERGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVD-------------DHYNGGAIW----------YPSAGDRFTGSDRYDVSNR
        S G +R   R   + RSR  D DG  DR+G            + DRY+D             D ++ G  +          Y   GDRF  SDRY +   
Subjt:  SVGGERGGGRGSFSSRSRF-DSDGRGDRFGG-----------DRDRYVD-------------DHYNGGAIW----------YPSAGDRFTGSDRYDVSNR

Query:  YPQNGY-VKDRGYDRDIGPRSGSDR
        + +N Y  ++R YDRD   R  SDR
Subjt:  YPQNGY-VKDRGYDRDIGPRSGSDR

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain4.4e-2338.18Show/hide
Query:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKM----EDDDTEPGFRGGGYSSSGRAS
        L+W  S  G L +  +  GH VE  ++L++ +GR RGFGFITF +++ MD+AI  M+G +L  R I+V+KA+P       D+D + G   G      R S
Subjt:  LSWILSLEGNLCNKVQVVGHTVE--IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKM----EDDDTEPGFRGGGYSSSGRAS

Query:  FGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRY--VDDHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNG
         GR      G  +CFKCG+PGH+AR+ PS     GGGR S S   R+ S  + DR+G   DRY   +D Y      Y S  DR++  D    S     + 
Subjt:  FGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRY--VDDHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNG

Query:  YVKDRGYDRDIG-PRSGSDR
        Y  DR  +R  G  R G  R
Subjt:  YVKDRGYDRDIG-PRSGSDR

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.5e-1035.62Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP
        +I+ +R++GR RGFGF+TF D + M DAI EM+G+EL  R+I+VN+A+ +        G  GG   S G    G G   S G    +  G  G + R   
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYP

Query:  SVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW
          G   GGG   +    R +  G G   GGD   Y      GG  W
Subjt:  SVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDDHYNGGAIW

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain5.0e-5152.89Show/hide
Query:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEP-GFRGG---GYSSSGRASFGRGKDKS--VGQDECFKCGRPGH
        +IMLERDTGR RGFGFITFADRR MD++IREMHG++  +R+ISVN+AEPK+  DD E  G RGG   GYS +G+ SFG G      VG+DECFKCGR GH
Subjt:  EIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRERIISVNKAEPKMEDDDTEP-GFRGG---GYSSSGRASFGRGKDKS--VGQDECFKCGRPGH

Query:  WARDYPSVGGERGGGRGSFSSRSRF--DSDGRGDRFGG-----DRDRYVDDHYNGGAIW----------------------YPSAGDRFTGSDRYD-VSN
        WARD PS GG RGG  G FSSR+     SDGR DR+       DR+RY+DD Y+G A +                      Y +  DRF G DRY   S+
Subjt:  WARDYPSVGGERGGGRGSFSSRSRF--DSDGRGDRFGG-----DRDRYVDDHYNGGAIW----------------------YPSAGDRFTGSDRYD-VSN

Query:  RYPQNGYVKDRGYDRDIGPRSGSDR
        RYP   Y K R ++RDI P +GSDR
Subjt:  RYPQNGYVKDRGYDRDIGPRSGSDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGAATCTGAAAATTGATTTTGCTGTATGGTTGTTCAATGAAATATCGAGGAGGAACTCAGTTTATATGGATAAGCTAAGAATTGCATTTCAGGCGAGGAATGT
TATTAATGCATTGTTGTACTTGCTACGGGCTGTGCAATGGTGGTGGAGTAATTTCAGCAGATCAATAGAAATGTTGTCTTGGATTTTAAGTCTTGAAGGCAACTTGTGTA
ACAAGGTTCAAGTTGTTGGACACACTGTAGAGATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGAT
GCAATCAGAGAGATGCATGGCCAGGAGCTTCGTGAGCGGATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGATGATGATACCGAGCCAGGCTTCAGGGGAGGAGG
TTATTCATCTAGTGGTAGGGCTAGTTTTGGGAGAGGAAAAGATAAATCTGTGGGGCAGGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTATCCCT
CTGTCGGTGGTGAACGTGGTGGGGGTAGAGGTTCATTTTCATCACGTTCTCGATTTGACAGTGATGGCCGTGGGGATCGTTTTGGAGGAGACCGTGATCGATATGTGGAT
GACCATTATAATGGAGGGGCGATATGGTACCCATCTGCTGGAGATCGCTTTACTGGTAGTGATAGGTATGATGTTAGTAATCGTTATCCTCAGAATGGCTACGTCAAAGA
CCGCGGCTACGATAGGGATATTGGTCCAAGGAGTGGCAGTGATAGGGAGGTTCTAACTCTACCTCCAGCCTCAGATATTTTAGTTCTCAATGTGGTGAATTACTCCGCTG
CCCCTGTTGACTTTGATTTGTTCTTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAGAATCTGAAAATTGATTTTGCTGTATGGTTGTTCAATGAAATATCGAGGAGGAACTCAGTTTATATGGATAAGCTAAGAATTGCATTTCAGGCGAGGAATGT
TATTAATGCATTGTTGTACTTGCTACGGGCTGTGCAATGGTGGTGGAGTAATTTCAGCAGATCAATAGAAATGTTGTCTTGGATTTTAAGTCTTGAAGGCAACTTGTGTA
ACAAGGTTCAAGTTGTTGGACACACTGTAGAGATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGAT
GCAATCAGAGAGATGCATGGCCAGGAGCTTCGTGAGCGGATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGATGATGATACCGAGCCAGGCTTCAGGGGAGGAGG
TTATTCATCTAGTGGTAGGGCTAGTTTTGGGAGAGGAAAAGATAAATCTGTGGGGCAGGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTATCCCT
CTGTCGGTGGTGAACGTGGTGGGGGTAGAGGTTCATTTTCATCACGTTCTCGATTTGACAGTGATGGCCGTGGGGATCGTTTTGGAGGAGACCGTGATCGATATGTGGAT
GACCATTATAATGGAGGGGCGATATGGTACCCATCTGCTGGAGATCGCTTTACTGGTAGTGATAGGTATGATGTTAGTAATCGTTATCCTCAGAATGGCTACGTCAAAGA
CCGCGGCTACGATAGGGATATTGGTCCAAGGAGTGGCAGTGATAGGGAGGTTCTAACTCTACCTCCAGCCTCAGATATTTTAGTTCTCAATGTGGTGAATTACTCCGCTG
CCCCTGTTGACTTTGATTTGTTCTTTTCTTAG
Protein sequenceShow/hide protein sequence
MQKNLKIDFAVWLFNEISRRNSVYMDKLRIAFQARNVINALLYLLRAVQWWWSNFSRSIEMLSWILSLEGNLCNKVQVVGHTVEIMLERDTGRPRGFGFITFADRRGMDD
AIREMHGQELRERIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRGKDKSVGQDECFKCGRPGHWARDYPSVGGERGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVD
DHYNGGAIWYPSAGDRFTGSDRYDVSNRYPQNGYVKDRGYDRDIGPRSGSDREVLTLPPASDILVLNVVNYSAAPVDFDLFFS