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Pay0001964 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001964
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Genome locationchr07:24956731..24960869
RNA-Seq ExpressionPay0001964
SyntenyPay0001964
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044831.1 uncharacterized protein E6C27_scaffold74G001230 [Cucumis melo var. makuwa]1.1e-51100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR
KAG7015189.1 hypothetical protein SDJN02_22822 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-5082.07Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG
        MEQSP+DSS +SIE   QIPATSPNS      T S +EDCT+ +SSLS T+I +AI+VVEKDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAG
Subjt:  MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG

Query:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLYPFCFIPS
        RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLYPF F+PS
Subjt:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLYPFCFIPS
TYK16633.1 uncharacterized protein E5676_scaffold21G004610 [Cucumis melo var. makuwa]1.1e-51100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR
XP_004146523.1 uncharacterized protein LOC101210623 [Cucumis sativus]7.6e-5896.21Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA+AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
XP_008452025.1 PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo]2.1e-60100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
TrEMBL top hitse value%identityAlignment
A0A0A0KWT2 Uncharacterized protein3.7e-5896.21Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA+AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
A0A1S3BTP0 uncharacterized protein LOC1034931561.0e-60100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
A0A5A7TTI6 Uncharacterized protein5.1e-52100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR
A0A5D3CXL4 Uncharacterized protein5.1e-52100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR
A0A6J1EUG1 uncharacterized protein LOC1114376688.5e-4782.48Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG
        MEQSP+DSS +SIE   QIPATSPNS      T S +EDCT+ +SSLS T+I +AI+VVEKDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAG
Subjt:  MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG

Query:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23330.1 BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1)2.0e-2472.15Show/hide
Query:  SSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRL
        SSL+Q +IL+ +  VEKDS AIAESF+SLF SLRS LSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRL
Subjt:  SSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRL
AT4G23330.2 unknown protein1.9e-3070.97Show/hide
Query:  SSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        SSL+Q +IL+ +  VEKDS AIAESF+SLF SLRS LSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRLN+E+KG++NLAA+L
Subjt:  SSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAATCTCCGGCGGATTCTTCCACGACGAGCATCGAAACTGAATGTCAGATTCCAGCGACATCTCCAAATTCGACCACTTCTTCTGACGTTGAAGATTGCACCAA
AACCCAATCTTCTTTGAGCCAAACCCAGATTCTCGAAGCCATTGAAGTCGTTGAGAAGGATTCTCTCGCCATTGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCT
CGGTCCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACGAAGGGCAATCGA
TACATTAATTCTTCCTTGAGATTAAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTGTATCCTTTCTGTTTCATTCCTTCTTTTTTTACTTTTTCGGCATG
CTCCCAGATACATGCCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATTGAACTTCACAAAAGAAACTAAAATCTAACCACCAATGAATTACTAAGAGAAGCGCTTTGGTGGAGCAATGGCCTGGTCCTAATGGGAACTCAAAAGAAACCCAATTC
TCGAATTGATTTTCAAGACTCTTTGAGAAATGGAGCAATCTCCGGCGGATTCTTCCACGACGAGCATCGAAACTGAATGTCAGATTCCAGCGACATCTCCAAATTCGACC
ACTTCTTCTGACGTTGAAGATTGCACCAAAACCCAATCTTCTTTGAGCCAAACCCAGATTCTCGAAGCCATTGAAGTCGTTGAGAAGGATTCTCTCGCCATTGCTGAGAG
CTTCACCTCTCTCTTTGCTTCCCTGCGCTCGGTCCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTG
TGCTTGATGCGGCAACGAAGGGCAATCGATACATTAATTCTTCCTTGAGATTAAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTGTATCCTTTCTGTTTC
ATTCCTTCTTTTTTTACTTTTTCGGCATGCTCCCAGATACATGCCCAGTAGATCATTCTAATGTTTCTTTATCTGGCTGTCATTTCCTCATGTTTCATTCCTCTGCATTA
CCCAAATTCCTTAATTTTTGCTTAGAAAGGTTTTGAGGAAGAATGTGGATGAACTTGACTTGGCTGTGAACAAGCTCCTTAATTTTCCATGAGCTCCGCTTGGTCGTATC
GTCGCTCTTGCAAGCTTAAGGATTTTTGTTTTCACCAAAGAGAAAATACAGTTCATGAAGAAAAATATTCATTCCATAGCTTCCTTCACATTTTACTCTAGGAAGCATCT
CATTGCATGTTAGGTTCTTTGATGTATTTATCCAGAAATAGATTTTCTTGATCGCTTAATAATGTATACTGGTTTGTGGTTTCGATAGTTATAAGGGTCTCTTTTCCTTG
GAGGCTATTCAGCTTTTGAGAGTTTTGTTCATAGACGCTATATATTATATTTATTTATATTTTTATCTTTTTTTAAAAAATTAAAAATTGGCTTAAATTATAAGTTTAGT
ATGTCTAATTTAAAAAATG
Protein sequenceShow/hide protein sequence
MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNR
YINSSLRLNQEMKGMDNLAAQLYPFCFIPSFFTFSACSQIHAQ