; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0001997 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0001997
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Genome locationchr07:24846131..24850802
RNA-Seq ExpressionPay0001997
SyntenyPay0001997
Gene Ontology termsGO:0015995 - chlorophyll biosynthetic process (biological process)
GO:0016117 - carotenoid biosynthetic process (biological process)
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (biological process)
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003526 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR020555 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
IPR036571 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044847.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Cucumis melo var. makuwa]2.0e-10791.3Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
        MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKS SPSKTLPFRVGHGFDLHRLEPG    +    I  
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
            +   DGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR

KAG6600551.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.0e-10284.75Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAI------KSGSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MAV  P FAS   ATTSHQS SLS YP SFPR  F  +SSSSS PS RVNSA S SV + TA+       S S SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAI------KSGSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS LLG
Subjt:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_004146533.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis sativus]6.6e-11493.56Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPL---SSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS
        MA+SAP FASP AATTSHQS SLS YPPSFP   FTPL   SSSSSLPSFRVNSA SHSVSSTTAIKS SPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPL---SSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS

Query:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP
        IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA LSELLGADP
Subjt:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP

Query:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_008452007.1 PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis melo]3.5e-12399.13Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
        MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAI+S SPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_038877996.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Benincasa hispida]3.6e-11293.04Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPL-SSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP
        MAVSAPFFASP AATTSHQS SLSFYPPSF RR FT + SSSSSLPSFRV SA S SV+ TTA+KS SPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPL-SSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP

Query:  HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSV
        HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG DPSV
Subjt:  HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSV

Query:  VNLKAKTHEKVDSLGENRSIAAHTVVLLMR
        VNLKAKTHEKVDSLGENRSIAAHTVVLLMR
Subjt:  VNLKAKTHEKVDSLGENRSIAAHTVVLLMR

TrEMBL top hitse value%identityAlignment
A0A0A0KWV1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase3.2e-11493.56Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPL---SSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS
        MA+SAP FASP AATTSHQS SLS YPPSFP   FTPL   SSSSSLPSFRVNSA SHSVSSTTAIKS SPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPL---SSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS

Query:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP
        IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA LSELLGADP
Subjt:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP

Query:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A1S3BTZ8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.7e-12399.13Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
        MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAI+S SPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A5A7TSJ1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase9.9e-10891.3Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
        MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKS SPSKTLPFRVGHGFDLHRLEPG    +    I  
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
            +   DGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A5D3D287 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.7e-12399.13Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
        MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAI+S SPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1FX89 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase4.8e-10284.32Show/hide
Query:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAI------KSGSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MAV  P FAS   ATTSHQS SLS YP SFPR  F  +SSSSS PS RVNSA S SV + TA+       S S SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAI------KSGSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

SwissProt top hitse value%identityAlignment
Q1LLZ4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.3e-4353.85Show/hide
Query:  RVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ
        R+G G+D+H L PG  LI+GG+ IPHDRG   HSD D LLH V DA+ GA  L DIG+ FPD+DP + GA S V ++EAVR + EAGY+IGN+DAT+I Q
Subjt:  RVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        +PKL+PH   + ANL+E LG   +  N+KAKT+EK+   G+   I A   VL+ RR
Subjt:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q2NAE1 Bifunctional enzyme IspD/IspF3.7e-4349.06Show/hide
Query:  LPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATL
        LP RVG GFD+H+LE G  L +GGI + HD+G   HSD DV LH +VDA+LGA+G  DIG  FP SDP+WKGA SS FI+ A +L+ EAGY +GN+D T+
Subjt:  LPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATL

Query:  ILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        I + P++ PH++A+   ++ELL   P  +++KA T EK+   G    IAA     ++R+
Subjt:  ILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q6EPN6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic6.4e-8068.72Show/hide
Query:  SAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRG
        S+ F ASP A   + ++ S    P + P R    L   S+L      +A +       A+ +      LPFRVGHGFDLHRLEPG PLIIGGI IPHDRG
Subjt:  SAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRG

Query:  CEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLK
        C+AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP+WKGA SSVF++EAV+LMHEAGY++GNLDATLILQ+PK+SP KE IR+NL +LLGADPSVVNLK
Subjt:  CEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLK

Query:  AKTHEKVDSLGENRSIAAHTVVLLMRR
        AKTHEKVDSLGENRSIAAHTVVLLMR+
Subjt:  AKTHEKVDSLGENRSIAAHTVVLLMRR

Q9CAK8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic5.4e-8783.77Show/hide
Query:  SSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP
        S S  PS  V SA S +V    ++ S  P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP
Subjt:  SSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP

Query:  KWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        KWKGA SSVFIKEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  KWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q9M4W3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic1.9e-8476.08Show/hide
Query:  TPLSSSSSLPSF--------RVNSAVSHSVSSTTAIKSG------SPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAI
        +P+  S + PS+        R  S V  + +S  A+++       +PSK L FRVGHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLLHCVVDAI
Subjt:  TPLSSSSSLPSF--------RVNSAVSHSVSSTTAIKSG------SPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAI

Query:  LGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAA
        LGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVRLM EAGY++GNLDATLILQRPK+SPHKEAIR NL +LLGADP VVNLKAKTHEKVDSLGENRSIAA
Subjt:  LGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAA

Query:  HTVVLLMRR
        HTVVLLMR+
Subjt:  HTVVLLMRR

Arabidopsis top hitse value%identityAlignment
AT1G63970.1 isoprenoid F3.9e-8883.77Show/hide
Query:  SSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP
        S S  PS  V SA S +V    ++ S  P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP
Subjt:  SSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP

Query:  KWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        KWKGA SSVFIKEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  KWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

AT1G63970.2 isoprenoid F1.3e-8079.58Show/hide
Query:  SSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP
        S S  PS  V SA S +V    ++ S  P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSD        VDAILGALGLPDIGQIFPDSDP
Subjt:  SSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP

Query:  KWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        KWKGA SSVFIKEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  KWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTCTCCGCCCCATTCTTCGCCTCTCCGCCCGCTGCCACTACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAATTTTTACTCC
TCTTTCCTCCTCTTCTTCTCTACCTTCTTTCCGTGTCAATTCCGCCGTTTCTCACTCTGTCTCCTCCACCACCGCCATCAAATCCGGTTCTCCCTCTAAAACCTTGCCGT
TTCGGGTTGGACACGGCTTCGATCTTCATCGGTTAGAACCTGGGTACCCTTTGATTATTGGGGGGATTAGTATTCCTCATGATAGAGGCTGCGAAGCTCATTCCGATGGA
GATGTTCTACTACACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCCATCATC
CGTTTTCATAAAAGAAGCTGTGAGACTGATGCACGAGGCAGGTTATGACATAGGCAACCTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAG
CTATCAGAGCAAACCTCTCTGAACTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAAGCGAAAACACACGAGAAGGTCGATAGTCTTGGCGAAAATAGAAGCATTGCT
GCTCATACTGTGGTCCTGTTGATGAGGAGATAG
mRNA sequenceShow/hide mRNA sequence
ACGCGCCTTGCTAACGCTGGCGCCAACAACAATACAATTCAACCACACAAAACCAAACAACCTCAGTCTCCTTTCCATGGCCGTCTCCGCCCCATTCTTCGCCTCTCCGC
CCGCTGCCACTACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAATTTTTACTCCTCTTTCCTCCTCTTCTTCTCTACCTTCTTTCCGT
GTCAATTCCGCCGTTTCTCACTCTGTCTCCTCCACCACCGCCATCAAATCCGGTTCTCCCTCTAAAACCTTGCCGTTTCGGGTTGGACACGGCTTCGATCTTCATCGGTT
AGAACCTGGGTACCCTTTGATTATTGGGGGGATTAGTATTCCTCATGATAGAGGCTGCGAAGCTCATTCCGATGGAGATGTTCTACTACACTGTGTGGTTGATGCAATTT
TGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCCATCATCCGTTTTCATAAAAGAAGCTGTGAGACTGATGCAC
GAGGCAGGTTATGACATAGGCAACCTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCTGAACTCCTGGGAGC
CGACCCCTCTGTCGTGAATCTGAAAGCGAAAACACACGAGAAGGTCGATAGTCTTGGCGAAAATAGAAGCATTGCTGCTCATACTGTGGTCCTGTTGATGAGGAGATAGA
AGCCCTGTCCTCCCATTAGTACTGCTGTGTAAGTGTAATAACAACAGTGCTCTCCGTTTTAATTGGAATATGCTTTATTGTTAAAATACTTTGAATTTTCCCCCATCCCC
TCCACAGTTCCCTGCAAAGTGCAAACAATTGTAAGTTGGGTTGTTACATTAAACGTTTTAATCATTTAACAACGTTGAAAAGCAACAGTATGGTGGGAGAATATTAGAAA
TTGCCTACAATTATTGTTTTTGTTCCTGTTTTTCCTTGCCTCATTTTCAATTTTACTTGATTAAACTCTAAACTTGAAGTACATTAAATTCTTGTGTAATGAGTGGC
Protein sequenceShow/hide protein sequence
MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIKSGSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDG
DVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIA
AHTVVLLMRR