; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0002046 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0002046
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr09:5435790..5436419
RNA-Seq ExpressionPay0002046
SyntenyPay0002046
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041132.1 hypothetical protein E6C27_scaffold128G00450 [Cucumis melo var. makuwa]1.1e-8876.7Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MAPYEALYGR CRT VCW+EVGERKLVGPELVQIT+ N+K+IRE L+ AQDRQKSYADK RR+LEF+VGD+VFLKLSPW+GV+RFGRKGKLSPR+I PY+
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        I ER+GP AYRL LP+EL+RIHDVFH+SML KY+PDPSH+L+ QPV+LKE+LSY EEP+QILD+KEQVLRNK IPL+KVLWR+H  EEATWE E  MK  
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YPHLFT
        YP LF+
Subjt:  YPHLFT

KAA0042458.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.6e-10697.52Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        ILERIGPVAYRLALPMELSRIHDVFH+SML KYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMK  
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YP
         P
Subjt:  YP

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-8876.7Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MAPYEALYGR CRT VCW+EVGERKLVGPELVQIT+ N+K+IRE L+ AQDRQKSYADK RR+LEF+VGD+VFLKLSPW+GV+RFGRKGKLSPR+I PY+
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        I ER+GP AYRL LP+EL+RIHDVFH+SML KY+PDPSH+L+ QPV+LKE+LSY EEP+QILD+KEQVLRNK IPL+KVLWR+H  EEATWE E  MK  
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YPHLFT
        YP LF+
Subjt:  YPHLFT

KAA0056222.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-10190.43Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MA YEALYGR CRTLVCW+EVGERKLVG ELVQITSENVKIIRERLKTAQDR+KSYADK RRDLEFEV DKVFLKLSPWKGVLRFG+KGKLSPRFI PYE
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        ILERIGPV YRLALPMELSRI DVFH+SML KYVPDP+HILEAQPV LKENLSYEEEPIQILDKKEQV+RNK+IPLVKVLWRNHNTEEATWE EQAMK Q
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YPHLFTSSP
        YP+LFTSSP
Subjt:  YPHLFTSSP

TYK05214.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-8876.7Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MAPYEALYGR CRT VCW+EVGERKLVGPELVQIT+ N+K+IRE L+ AQDRQKSYADK RR+LEF+VGD+VFLKLSPW+GV+RFGRKGKLSPR+I PY+
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        I ER+GP AYRL LP+EL+RIHDVFH+SML KY+PDPSH+L+ QPV+LKE+LSY EEP+QILD+KEQVLRNK IPL+KVLWR+H  EEATWE E  MK  
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YPHLFT
        YP LF+
Subjt:  YPHLFT

TrEMBL top hitse value%identityAlignment
A0A5A7U2V7 Reverse transcriptase5.5e-8976.7Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MAPYEALYGR CRT VCW+EVGERKLVGPELVQIT+ N+K+IRE L+ AQDRQKSYADK RR+LEF+VGD+VFLKLSPW+GV+RFGRKGKLSPR+I PY+
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        I ER+GP AYRL LP+EL+RIHDVFH+SML KY+PDPSH+L+ QPV+LKE+LSY EEP+QILD+KEQVLRNK IPL+KVLWR+H  EEATWE E  MK  
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YPHLFT
        YP LF+
Subjt:  YPHLFT

A0A5A7UK27 Reverse transcriptase5.6e-10290.43Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MA YEALYGR CRTLVCW+EVGERKLVG ELVQITSENVKIIRERLKTAQDR+KSYADK RRDLEFEV DKVFLKLSPWKGVLRFG+KGKLSPRFI PYE
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        ILERIGPV YRLALPMELSRI DVFH+SML KYVPDP+HILEAQPV LKENLSYEEEPIQILDKKEQV+RNK+IPLVKVLWRNHNTEEATWE EQAMK Q
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YPHLFTSSP
        YP+LFTSSP
Subjt:  YPHLFTSSP

A0A5D3BHI1 Reverse transcriptase5.5e-8976.7Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MAPYEALYGR CRT VCW+EVGERKLVGPELVQIT+ N+K+IRE L+ AQDRQKSYADK RR+LEF+VGD+VFLKLSPW+GV+RFGRKGKLSPR+I PY+
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        I ER+GP AYRL LP+EL+RIHDVFH+SML KY+PDPSH+L+ QPV+LKE+LSY EEP+QILD+KEQVLRNK IPL+KVLWR+H  EEATWE E  MK  
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YPHLFT
        YP LF+
Subjt:  YPHLFT

A0A5D3BS67 Reverse transcriptase5.5e-8976.7Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MAPYEALYGR CRT VCW+EVGERKLVGPELVQIT+ N+K+IRE L+ AQDRQKSYADK RR+LEF+VGD+VFLKLSPW+GV+RFGRKGKLSPR+I PY+
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        I ER+GP AYRL LP+EL+RIHDVFH+SML KY+PDPSH+L+ QPV+LKE+LSY EEP+QILD+KEQVLRNK IPL+KVLWR+H  EEATWE E  MK  
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YPHLFT
        YP LF+
Subjt:  YPHLFT

A0A5D3DHF7 Putative DNA/RNA polymerases superfamily protein7.6e-10797.52Show/hide
Query:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
        MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE
Subjt:  MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYE

Query:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ
        ILERIGPVAYRLALPMELSRIHDVFH+SML KYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMK  
Subjt:  ILERIGPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQ

Query:  YP
         P
Subjt:  YP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.1e-0433.01Show/hide
Query:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML
        Q T +  + ++E L T   + K Y D   +++ EF+ GD V +K +   G L   +  KL+P F  P+ +L++ GP  Y L LP  +  +    FH+S L
Subjt:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML

Query:  CKY
         KY
Subjt:  CKY

P0CT35 Transposon Tf2-2 polyprotein1.1e-0433.01Show/hide
Query:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML
        Q T +  + ++E L T   + K Y D   +++ EF+ GD V +K +   G L   +  KL+P F  P+ +L++ GP  Y L LP  +  +    FH+S L
Subjt:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML

Query:  CKY
         KY
Subjt:  CKY

P0CT36 Transposon Tf2-3 polyprotein1.1e-0433.01Show/hide
Query:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML
        Q T +  + ++E L T   + K Y D   +++ EF+ GD V +K +   G L   +  KL+P F  P+ +L++ GP  Y L LP  +  +    FH+S L
Subjt:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML

Query:  CKY
         KY
Subjt:  CKY

P0CT41 Transposon Tf2-12 polyprotein1.1e-0433.01Show/hide
Query:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML
        Q T +  + ++E L T   + K Y D   +++ EF+ GD V +K +   G L   +  KL+P F  P+ +L++ GP  Y L LP  +  +    FH+S L
Subjt:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML

Query:  CKY
         KY
Subjt:  CKY

Q9UR07 Transposon Tf2-11 polyprotein1.1e-0433.01Show/hide
Query:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML
        Q T +  + ++E L T   + K Y D   +++ EF+ GD V +K +   G L   +  KL+P F  P+ +L++ GP  Y L LP  +  +    FH+S L
Subjt:  QITSENVKIIRERLKTAQDRQKSYADKGRRDL-EFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERIGPVAYRLALPMELSRI-HDVFHMSML

Query:  CKY
         KY
Subjt:  CKY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCATATGAGGCTTTGTATGGTAGACGTTGTAGAACTCTCGTGTGCTGGGATGAAGTTGGAGAAAGGAAGTTAGTGGGGCCAGAATTAGTACAAATCACT
TCAGAGAATGTGAAGATTATTAGGGAACGATTGAAAACAGCCCAGGATCGACAAAAAAGTTATGCAGATAAGGGCCGACGAGATTTAGAATTTGAAGTTGGTGAC
AAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGCGTGCTTCGATTTGGCAGAAAAGGAAAGTTGAGTCCAAGATTTATTAGGCCTTATGAGATACTAGAACGTATT
GGGCCTGTAGCATACCGTTTGGCATTACCTATGGAACTTTCCAGGATTCATGATGTGTTTCATATGTCAATGTTGTGTAAGTATGTCCCAGATCCATCTCATATC
CTTGAAGCACAACCAGTTCAATTAAAAGAGAACTTGTCCTACGAAGAGGAGCCAATACAAATTCTTGACAAGAAAGAACAAGTGCTAAGGAACAAAGTGATCCCA
TTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAATTAGAGCAAGCAATGAAGGTGCAATACCCACATCTTTTCACATCATCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCATATGAGGCTTTGTATGGTAGACGTTGTAGAACTCTCGTGTGCTGGGATGAAGTTGGAGAAAGGAAGTTAGTGGGGCCAGAATTAGTACAAATCACT
TCAGAGAATGTGAAGATTATTAGGGAACGATTGAAAACAGCCCAGGATCGACAAAAAAGTTATGCAGATAAGGGCCGACGAGATTTAGAATTTGAAGTTGGTGAC
AAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGCGTGCTTCGATTTGGCAGAAAAGGAAAGTTGAGTCCAAGATTTATTAGGCCTTATGAGATACTAGAACGTATT
GGGCCTGTAGCATACCGTTTGGCATTACCTATGGAACTTTCCAGGATTCATGATGTGTTTCATATGTCAATGTTGTGTAAGTATGTCCCAGATCCATCTCATATC
CTTGAAGCACAACCAGTTCAATTAAAAGAGAACTTGTCCTACGAAGAGGAGCCAATACAAATTCTTGACAAGAAAGAACAAGTGCTAAGGAACAAAGTGATCCCA
TTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAATTAGAGCAAGCAATGAAGGTGCAATACCCACATCTTTTCACATCATCACCTTGA
Protein sequenceShow/hide protein sequence
MAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRPYEILERI
GPVAYRLALPMELSRIHDVFHMSMLCKYVPDPSHILEAQPVQLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWELEQAMKVQYPHLFTSSP