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Pay0002131 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0002131
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag-pol polyprotein
Genome locationchr01:29984559..29985080
RNA-Seq ExpressionPay0002131
SyntenyPay0002131
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033829.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.9e-6576.88Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+II+EGPS SRP VLD                  DGKAWRALV GYDP M+ VNGVSVPKPE+DWTDAEEQASIGN RA N  FNGVD N+FKLINSCS
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWK LEV YEGTSKVKISRLQLITSKFEALRMIEDE VSDYNKRVLEI NES +LGEKIPDSKI RKVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
KAA0056213.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.9e-6779.77Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+IIREGPS SRP VLD                  DGKAWRALV GYDP M+T NGVSVPK E+DWTDAEEQAS+GN RA NAIFNGVD NIFKLINSCS
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRM EDESV DYNKRVLEIANES LLGEKIPDSKI RKVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
TYK02457.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]4.5e-6678.61Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+IIREGPS SR  VLD                  DGKAWRALV GYDP M+TVNGVSVPKPE+DWTDAEEQAS+GN RALN IFNGVD N+FKLINSCS
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWKTLEVA EGTSKVKISRLQLIT KFEALRM EDESVSDYNKRVLEIANES LLGEKIPDSK+ RKVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
TYK05804.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.2e-6576.88Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+IIREGPS SRP +LD                  DGKAWRALV GYDP M+TVNG+SVPKPE+DWTDAEEQAS+GN RALN IFNGVD NIFKLINSC+
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWKTLEVAY+GT KVKISRLQLI SKFEALRMIEDESV DYNKRVLEIANES +LGEKIPDSKI  KVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
TYK18530.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.0e-6576.88Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+IIREGPS S P VLD                   GKAWRALV GYDPSM+ VNGVSVPKPE+DWTDA+E+AS+GN R LNAIFNGVD N+FKLINSCS
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRM EDESVS+YNKRV+EI NES LLGEKIPDSKI RKVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
TrEMBL top hitse value%identityAlignment
A0A5A7UJR8 Putative mitochondrial protein3.3e-6779.77Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+IIREGPS SRP VLD                  DGKAWRALV GYDP M+T NGVSVPK E+DWTDAEEQAS+GN RA NAIFNGVD NIFKLINSCS
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRM EDESV DYNKRVLEIANES LLGEKIPDSKI RKVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
A0A5D3BSP9 Gag-proteinase polyprotein2.2e-6678.61Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+IIREGPS SR  VLD                  DGKAWRALV GYDP M+TVNGVSVPKPE+DWTDAEEQAS+GN RALN IFNGVD N+FKLINSCS
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWKTLEVA EGTSKVKISRLQLIT KFEALRM EDESVSDYNKRVLEIANES LLGEKIPDSK+ RKVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
A0A5D3C3B9 Gag-pol polyprotein1.1e-6576.88Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+IIREGPS SRP +LD                  DGKAWRALV GYDP M+TVNG+SVPKPE+DWTDAEEQAS+GN RALN IFNGVD NIFKLINSC+
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWKTLEVAY+GT KVKISRLQLI SKFEALRMIEDESV DYNKRVLEIANES +LGEKIPDSKI  KVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
A0A5D3D4T1 Gag-pol polyprotein4.8e-6676.88Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+IIREGPS S P VLD                   GKAWRALV GYDPSM+ VNGVSVPKPE+DWTDA+E+AS+GN R LNAIFNGVD N+FKLINSCS
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRM EDESVS+YNKRV+EI NES LLGEKIPDSKI RKVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
A0A5D3DEP7 Gag-pol polyprotein1.4e-6576.88Show/hide
Query:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS
        M+II+EGPS SRP VLD                  DGKAWRALV GYDP M+ VNGVSVPKPE+DWTDAEEQASIGN RA N  FNGVD N+FKLINSCS
Subjt:  MKIIREGPSVSRPHVLD------------------DGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCS

Query:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
        TAKEAWK LEV YEGTSKVKISRLQLITSKFEALRMIEDE VSDYNKRVLEI NES +LGEKIPDSKI RKVL
Subjt:  TAKEAWKTLEVAYEGTSKVKISRLQLITSKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATAATCAGAGAAGGACCATCTGTATCACGTCCTCATGTCCTAGATGATGGAAAAGCTTGGAGAGCTCTTGTGGTGGGCTATGATCCTTCTATGGTTACCGTGAA
TGGTGTTTCAGTTCCAAAGCCTGAAATTGATTGGACCGATGCTGAAGAGCAAGCATCCATTGGGAATGTCAGAGCACTTAACGCGATATTCAATGGTGTTGACCATAACA
TTTTCAAGTTAATAAATTCGTGCAGTACAGCCAAAGAAGCTTGGAAAACCTTAGAGGTAGCATATGAAGGTACTTCCAAAGTAAAAATTTCTAGATTACAGTTGATAACA
TCTAAGTTTGAGGCATTAAGAATGATCGAGGATGAATCAGTGTCTGATTACAATAAGAGAGTGCTTGAAATTGCAAATGAATCCTTTCTGCTCGGTGAGAAGATACCTGA
CTCTAAAATAGAGCGAAAAGTACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATAATCAGAGAAGGACCATCTGTATCACGTCCTCATGTCCTAGATGATGGAAAAGCTTGGAGAGCTCTTGTGGTGGGCTATGATCCTTCTATGGTTACCGTGAA
TGGTGTTTCAGTTCCAAAGCCTGAAATTGATTGGACCGATGCTGAAGAGCAAGCATCCATTGGGAATGTCAGAGCACTTAACGCGATATTCAATGGTGTTGACCATAACA
TTTTCAAGTTAATAAATTCGTGCAGTACAGCCAAAGAAGCTTGGAAAACCTTAGAGGTAGCATATGAAGGTACTTCCAAAGTAAAAATTTCTAGATTACAGTTGATAACA
TCTAAGTTTGAGGCATTAAGAATGATCGAGGATGAATCAGTGTCTGATTACAATAAGAGAGTGCTTGAAATTGCAAATGAATCCTTTCTGCTCGGTGAGAAGATACCTGA
CTCTAAAATAGAGCGAAAAGTACTTTGA
Protein sequenceShow/hide protein sequence
MKIIREGPSVSRPHVLDDGKAWRALVVGYDPSMVTVNGVSVPKPEIDWTDAEEQASIGNVRALNAIFNGVDHNIFKLINSCSTAKEAWKTLEVAYEGTSKVKISRLQLIT
SKFEALRMIEDESVSDYNKRVLEIANESFLLGEKIPDSKIERKVL