CuGenDBv2

Gene ID	Pay0002400
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Rab5-interacting
Genome location	chr12:2614359..2616638
RNA-Seq Expression	Pay0002400
Synteny	Pay0002400
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0067751.1 Rab5-interacting [Cucumis melo var. makuwa]

9.2e-60

99.14

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLV
        VLLQEGLFASVTLFL+
Subjt:  VLLQEGLFASVTLFLV

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

7.0e-60

98.29

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLVI
        VLLQEGLFASVTLFL++
Subjt:  VLLQEGLFASVTLFLVI

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

1.9e-57

92.31

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLVI
        VLLQEGLFAS+TLFL++
Subjt:  VLLQEGLFASVTLFLVI

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

4.3e-57

91.45

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLVI
        VLLQEGLFAS+TLFL++
Subjt:  VLLQEGLFASVTLFLVI

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

3.9e-58

94.02

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+ KVNSQLQHQNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLVI
        VLLQEGLFAS+TLFL++
Subjt:  VLLQEGLFASVTLFLVI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

7.8e-57

94.02

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLVI
        VLLQEGLFAS+TLFL++
Subjt:  VLLQEGLFASVTLFLVI

A0A1S3C692 uncharacterized protein C20orf24 homolog

3.4e-60

98.29

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLVI
        VLLQEGLFASVTLFL++
Subjt:  VLLQEGLFASVTLFLVI

A0A5A7VQ84 Rab5-interacting

4.4e-60

99.14

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLV
        VLLQEGLFASVTLFL+
Subjt:  VLLQEGLFASVTLFLV

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

9.3e-58

92.31

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLVI
        VLLQEGLFAS+TLFL++
Subjt:  VLLQEGLFASVTLFLVI

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

2.1e-57

91.45

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASVTLFLVI
        VLLQEGLFAS+TLFL++
Subjt:  VLLQEGLFASVTLFLVI

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

5.5e-15

35.9

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     +++   + +W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASVTLFLV
          L +EG   S  LF+V
Subjt:  GVLLQEGLFASVTLFLV

Q9CQT9 Respirasome Complex Assembly Factor 1

8.5e-16

37.29

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Query:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     +++   + +W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASVTLFLVI
          L +EG   S  LF+VI
Subjt:  GVLLQEGLFASVTLFLVI

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

1.3e-43

64.75

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Query:  MKDGKTMKVNS------QLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEE
        MK+GK+ K +S      Q+ HQN HL  F  A+LFD E SWDKDQLGDVLHW+RQ V L+CGLLWG+IPLVGGIW +LFL IS+ ++YGYYA++LK+DEE
Subjt:  MKDGKTMKVNS------QLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASVTLFLV
        +FGGH  LLQ+GLFAS++LFL+
Subjt:  EFGGHGVLLQEGLFASVTLFLV

AT5G59410.1 Rab5-interacting family protein

4.7e-46

72.27

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Query:  MKDGKTMKVN---SQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFG
        MK+ K+ K+N    Q  HQN HL P KLA+LFDP+ SWDKDQLGDVLHW+RQ V L+ GLLWGSIPLVGGIW ILFL IS+ ++YGYYAMILKVDEE+FG
Subjt:  MKDGKTMKVN---SQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASVTLFLV
        GH  LLQEGLFAS+TLFL+
Subjt:  GHGVLLQEGLFASVTLFLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGGACGGGAAAACTATGAAGGTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCACCCTTCAAATTGGCTAGATTGTTCGATCCAGAGACTTCATGG
GATAAGGATCAACTAGGAGATGTGTTGCATTGGATGAGACAGTCGGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTC
ATCTTATTCTTGGTGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAAGAATTCGGTGGTCATGGAGTTCTCCTCCAGGAA
GGGCTGTTTGCTTCCGTAACTCTGTTTCTGGTAATCCAATGCCATCGTTTAAATTATAAACCTTCATCTTCTTTTGAAAGTTGCTGA

mRNA sequence

Show/hide mRNA sequence

GAGATTTTGGTGACCCAATAATTTTCATTAAAAAAAAAAAAAAAAAAGGAACACTACAATTTCCCACTTCAGATTGAATCCAAATTTCACGAATTTTTTTTTAGA
AATTTTGAATGGAGAGAGATTTACAGAAAGCCGTCTTCTGAATTTGTTTATTCGATTTCCCTCAATTTCATGGCGTTCTTGTTTTTTCCAAAACCCTAGTAATCA
GTAGCATCTCCCATCTTCCCTCTCCATACTCTTCACTGGGTATCTCGAATTTTCCCCCAATTTTTCGATTTCGGAGCAGTCAGCATGAAGGACGGGAAAACTATG
AAGGTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCACCCTTCAAATTGGCTAGATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGAT
GTGTTGCATTGGATGAGACAGTCGGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCA
ACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAAGAATTCGGTGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCGTAACT
CTGTTTCTGGTAATCCAATGCCATCGTTTAAATTATAAACCTTCATCTTCTTTTGAAAGTTGCTGAGTCTTTTGTTAGTTCAAGTGCTTAATTTTCATTTTCTCT
CTGCTGTTCAGCTTATGTGGACCCTCATTTATAGCTTGGGACACTTCTGACAATGGTTTTGTCAACGTTCTCGAAATCGGCCAAAGCATCGGTGGAGAGGTTGGT
CGCCATTGTTGCTTGCTCTTTTATTAGTGAATGTGCAGTACCTTACTGTTAAGGAGTGAAAACGCTTTTAGAAGTGGATTAATTTCATTAGGATTACAATTAACC
AAAGTTTAGAAATTATTTACTCTGTTAGATCCAATCCAATCTTAAATCAATAAAATCTTTACCGAAATGTCGTTTTTTTTTCACTACATCCTTTCCGTTAACCTA
AAACATTGCTCAATTGGTTTAGATATATGTCATTTGACATCAGAGATCAAATG

Protein sequence

Show/hide protein sequence

MKDGKTMKVNSQLQHQNGHLPPFKLARLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQE
GLFASVTLFLVIQCHRLNYKPSSSFESC

Pay0002400 (gene) of Melon (Payzawat) v1 genome