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Pay0002560 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0002560
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr08:25766328..25766648
RNA-Seq ExpressionPay0002560
SyntenyPay0002560
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]5.3e-5093.4Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKHSSARNVIER FGVLKGRWAILRGKSYYPVEVQCR ILACCLLHNLINREMTNFDIEDNIDEV STHATT  DDIHYIETSNEWSQ RDDLAEEMFT+
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

KAA0054148.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-5094.34Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR ILACCLLHNLINREMTNFDIEDNIDEV STHATT  DDIHYIETSNEWSQ RDDLAEEMFT+
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

KAA0054744.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.1e-5094.34Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKH SARNVIERAFGVLKGRWAILRGKSYYPVEVQCR ILACCLLHNLINREMT+FDIEDNIDEV STHATTTVDDIHYIETSNEWSQ RDDLAEEMF+D
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-5094.34Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR ILACCLLHNLINREMTNFDIEDNIDEV STHATT  DDIHYIETSNEWSQ RDDLAEEMFT+
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

XP_008464268.1 PREDICTED: uncharacterized protein LOC103502196 [Cucumis melo]3.5e-54100Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

TrEMBL top hitse value%identityAlignment
A0A1S3CLJ6 uncharacterized protein LOC1035021961.7e-54100Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

A0A5A7UGH9 Retrotransposon protein8.7e-5194.34Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR ILACCLLHNLINREMTNFDIEDNIDEV STHATT  DDIHYIETSNEWSQ RDDLAEEMFT+
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

A0A5A7UHX1 Putative nuclease HARBI11.5e-5094.34Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKH SARNVIERAFGVLKGRWAILRGKSYYPVEVQCR ILACCLLHNLINREMT+FDIEDNIDEV STHATTTVDDIHYIETSNEWSQ RDDLAEEMF+D
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

A0A5A7V9S0 Putative nuclease HARBI11.7e-54100Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

A0A5A7VL29 Retrotransposon protein8.7e-5194.34Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD
        MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR ILACCLLHNLINREMTNFDIEDNIDEV STHATT  DDIHYIETSNEWSQ RDDLAEEMFT+
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTD

Query:  WELRNQ
        WELRNQ
Subjt:  WELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12010.1 unknown protein3.6e-0440.43Show/hide
Query:  KHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNL
        K S  + V + AFG LKGRWA L+ ++   ++     + ACC+LHN+
Subjt:  KHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNL

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.5e-0727.43Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIE---------DNIDEVGSTHATTTVDDIHYIETSNE----WS
        ++H S RNVIER FG+ K R+AI +    +  + Q   +L C  LHN + +E  + + +         D ++  G+   T  +D+   +E   +     +
Subjt:  MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIE---------DNIDEVGSTHATTTVDDIHYIETSNE----WS

Query:  QLRDDLAEEMFTD
          R  +AE+M+ D
Subjt:  QLRDDLAEEMFTD

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)7.2e-0525.44Show/hide
Query:  KHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDI-----EDNIDEVGSTHATTTVDDIHYI---------ETSNEWS
        +H      I R FG LK R+ IL     YP++ Q + ++A C LHN +  E  +  +     E+ + E G        ++   I         E   +  
Subjt:  KHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDI-----EDNIDEVGSTHATTTVDDIHYI---------ETSNEWS

Query:  QLRDDLAEEMFTDW
        +LRD++A E++  +
Subjt:  QLRDDLAEEMFTDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATGGGCGATACTGCGGGGAAAGTCATACTACCCTGTAGAAGTTCAA
TGTCGCAAAATACTCGCATGTTGTCTCCTCCACAACCTTATCAATAGAGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGGTTCCACCCATGCG
ACTACTACCGTCGATGACATACATTACATAGAGACATCCAATGAGTGGAGTCAATTGAGGGACGACCTTGCAGAAGAAATGTTTACTGATTGGGAGTTGCGTAAC
CAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATGGGCGATACTGCGGGGAAAGTCATACTACCCTGTAGAAGTTCAA
TGTCGCAAAATACTCGCATGTTGTCTCCTCCACAACCTTATCAATAGAGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGGTTCCACCCATGCG
ACTACTACCGTCGATGACATACATTACATAGAGACATCCAATGAGTGGAGTCAATTGAGGGACGACCTTGCAGAAGAAATGTTTACTGATTGGGAGTTGCGTAAC
CAATAG
Protein sequenceShow/hide protein sequence
MKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRKILACCLLHNLINREMTNFDIEDNIDEVGSTHATTTVDDIHYIETSNEWSQLRDDLAEEMFTDWELRN
Q