; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0002938 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0002938
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 3, chloroplastic
Genome locationchr04:9912042..9912915
RNA-Seq ExpressionPay0002938
SyntenyPay0002938
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009344 - nitrite reductase complex [NAD(P)H] (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151964.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis sativus]9.8e-11298.14Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
        MARLANLNGKFSAIPNLPKLQNIHK+LKITGFLKKQTDVSSHQ SLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNI NEQTGTRSFL
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL

Query:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
        KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLE+AAKQKNLSETESYY
Subjt:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

XP_008454569.1 PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis melo]4.0e-11399.53Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
        MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQ SLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL

Query:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
        KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
Subjt:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

XP_022139520.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Momordica charantia]1.9e-9988.99Show/hide
Query:  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTR
        MARLANLNG   KFSAIP LPKLQN  K+LKI GFL KQT+VSSH +S TRRLALTS+VSVALFGNAS EIASANEYWLDGPLPVPSV NNIANE+TGTR
Subjt:  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTR

Query:  SFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAAD EKQPL +LANRLFDNFEKLE+AAKQKNLSETE
Subjt:  SFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_022940191.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita moschata]3.4e-9686.24Show/hide
Query:  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTR
        MARLANLNG   KFSAIP L KLQ   K+ KI G L+KQ +VSSH+ SLTRRLALTSL SVALFGNAS EIASANEYWLDGPLP+PSV NNIANE+TGTR
Subjt:  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTR

Query:  SFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAA D EKQPL DLANRLFDNFEKLE+AAKQKNLSETE
Subjt:  SFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_038899633.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Benincasa hispida]5.4e-10290.7Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
        MARLANLN KF+AIPNLPKLQN  K+LKITGFLKKQTDVSSHQ SLTRRLALTSLVSVALFGNAS EIASANEYWLDGPLPVPSV NNIANE+TGTRSFL
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL

Query:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
        KTGIYIANIGT+GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISA  +  KQPL+DLANRLFDNFEKLE+AAKQKNLSETE+YY
Subjt:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTP+LQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

TrEMBL top hitse value%identityAlignment
A0A0A0L7N1 Uncharacterized protein4.7e-11298.14Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
        MARLANLNGKFSAIPNLPKLQNIHK+LKITGFLKKQTDVSSHQ SLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNI NEQTGTRSFL
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL

Query:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
        KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLE+AAKQKNLSETESYY
Subjt:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A1S3BZP3 photosynthetic NDH subunit of lumenal location 3, chloroplastic1.9e-11399.53Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
        MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQ SLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL

Query:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
        KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
Subjt:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A5A7TX10 Photosynthetic NDH subunit of lumenal location 31.9e-11399.53Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
        MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQ SLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFL

Query:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
        KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY
Subjt:  KTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A6J1CCI9 photosynthetic NDH subunit of lumenal location 3, chloroplastic9.3e-10088.99Show/hide
Query:  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTR
        MARLANLNG   KFSAIP LPKLQN  K+LKI GFL KQT+VSSH +S TRRLALTS+VSVALFGNAS EIASANEYWLDGPLPVPSV NNIANE+TGTR
Subjt:  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTR

Query:  SFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAAD EKQPL +LANRLFDNFEKLE+AAKQKNLSETE
Subjt:  SFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1FHS2 photosynthetic NDH subunit of lumenal location 3, chloroplastic1.6e-9686.24Show/hide
Query:  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTR
        MARLANLNG   KFSAIP L KLQ   K+ KI G L+KQ +VSSH+ SLTRRLALTSL SVALFGNAS EIASANEYWLDGPLP+PSV NNIANE+TGTR
Subjt:  MARLANLNG---KFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTR

Query:  SFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAA D EKQPL DLANRLFDNFEKLE+AAKQKNLSETE
Subjt:  SFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

SwissProt top hitse value%identityAlignment
P83646 Oxygen-evolving enhancer protein 3, chloroplastic2.0e-1131.21Show/hide
Query:  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIANEQT-GTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR
        T R A+  LV+  + G A  +  +A A +    GP P PS  +   + ++Q   T   L+   Y+  +       R K+ A D++ +  LI K    +VR
Subjt:  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIANEQT-GTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR

Query:  KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM
          LRL+++++ YD   VI++   DEK+ L DL  +LF   + L++AAK K+  E E YY  T   L +V+ ++
Subjt:  KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM

Q0D5P8 Oxygen-evolving enhancer protein 3, chloroplastic2.0e-1131.21Show/hide
Query:  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIANEQT-GTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR
        T R A+  LV+  + G A  +  +A A +    GP P PS  +   + ++Q   T   L+   Y+  +       R K+ A D++ +  LI K    +VR
Subjt:  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIANEQT-GTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR

Query:  KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM
          LRL+++++ YD   VI++   DEK+ L DL  +LF   + L++AAK K+  E E YY  T   L +V+ ++
Subjt:  KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM

Q41932 Oxygen-evolving enhancer protein 3-2, chloroplastic7.0e-1229.95Show/hide
Query:  LKKQTDVSSHQTSLTRRLALTSLVSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLA
        ++ Q +VS  ++S   R ++  LV+  L G +      A A    + GP P+PS      +     R F   LK   YI  +       R K  A +++ 
Subjt:  LKKQTDVSSHQTSLTRRLALTSLVSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLA

Query:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM
        +   I K    YV+  LRL+++++ YD + VISA   +EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM

Q9SGH4 Photosynthetic NDH subunit of lumenal location 3, chloroplastic5.5e-6558.64Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTS--LTRRLALTSLVSVAL---FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTG
        MA   +LN   + +P+LPKL    K  K +GF  ++T+      S  +TRR+ L   VS+ L    G  +  +A  N +W+DGPLP+P + NNI NE+TG
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTS--LTRRLALTSLVSVAL---FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTG

Query:  TRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSE
        TR+F+K G+Y+A+IGTKGR YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFD +ISAAA ++KQPL DLANRLFDNFEKLE+AAK KNL+E
Subjt:  TRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSE

Query:  TESYYQQTTPILQEVMDRMA
        TES Y+ T  +LQEVM RMA
Subjt:  TESYYQQTTPILQEVMDRMA

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic6.8e-1528.7Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFL----KKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPSVDNNIANEQTG
        MA +  L+G   A+       N   +L  +G +    + +  V + Q+  T R ++  LV+  L G +  +   A+   +  GP P PS       + + 
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFL----KKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPSVDNNIANEQTG

Query:  -TRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQK
          R F   LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ YD + +IS+   DEK+ L DL  +LFD  + L+ AAK+K
Subjt:  -TRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQK

Query:  NLSETESYYQQTTPILQEVMDRM
        + S+ E YY +T   L EV+ ++
Subjt:  NLSETESYYQQTTPILQEVMDRM

Arabidopsis top hitse value%identityAlignment
AT3G01440.1 PsbQ-like 13.9e-6658.64Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTS--LTRRLALTSLVSVAL---FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTG
        MA   +LN   + +P+LPKL    K  K +GF  ++T+      S  +TRR+ L   VS+ L    G  +  +A  N +W+DGPLP+P + NNI NE+TG
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTS--LTRRLALTSLVSVAL---FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTG

Query:  TRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSE
        TR+F+K G+Y+A+IGTKGR YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFD +ISAAA ++KQPL DLANRLFDNFEKLE+AAK KNL+E
Subjt:  TRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSE

Query:  TESYYQQTTPILQEVMDRMA
        TES Y+ T  +LQEVM RMA
Subjt:  TESYYQQTTPILQEVMDRMA

AT4G05180.1 photosystem II subunit Q-25.0e-1329.95Show/hide
Query:  LKKQTDVSSHQTSLTRRLALTSLVSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLA
        ++ Q +VS  ++S   R ++  LV+  L G +      A A    + GP P+PS      +     R F   LK   YI  +       R K  A +++ 
Subjt:  LKKQTDVSSHQTSLTRRLALTSLVSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLA

Query:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM
        +   I K    YV+  LRL+++++ YD + VISA   +EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRM

AT4G21280.1 photosystem II subunit QA1.3e-1628.83Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFL----KKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPSVDNNIANEQTG
        MA +  L+G   A+       N   +L  +G +    + +  V + Q+  T R ++  LV+  L G +  +   A+   +  GP P PS      +    
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFL----KKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPSVDNNIANEQTG

Query:  TRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKN
         R F   LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ YD + +IS+   DEK+ L DL  +LFD  + L+ AAK+K+
Subjt:  TRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKN

Query:  LSETESYYQQTTPILQEVMDRM
         S+ E YY +T   L EV+ ++
Subjt:  LSETESYYQQTTPILQEVMDRM

AT4G21280.2 photosystem II subunit QA4.8e-1628.7Show/hide
Query:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFL----KKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPSVDNNIANEQTG
        MA +  L+G   A+       N   +L  +G +    + +  V + Q+  T R ++  LV+  L G +  +   A+   +  GP P PS       + + 
Subjt:  MARLANLNGKFSAIPNLPKLQNIHKKLKITGFL----KKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPSVDNNIANEQTG

Query:  -TRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQK
          R F   LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ YD + +IS+   DEK+ L DL  +LFD  + L+ AAK+K
Subjt:  -TRSF---LKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQK

Query:  NLSETESYYQQTTPILQEVMDRM
        + S+ E YY +T   L EV+ ++
Subjt:  NLSETESYYQQTTPILQEVMDRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAAC
GGATGTTTCTTCTCATCAAACCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTCAGCTAACGAGT
ATTGGCTTGATGGCCCTTTGCCTGTCCCTTCTGTTGACAACAACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGA
ACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAA
ATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGC
TTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCATTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAAACTCAAAATTACTGGGTTTCTCAAGAAACAAAC
GGATGTTTCTTCTCATCAAACCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATTGCTTCAGCTAACGAGT
ATTGGCTTGATGGCCCTTTGCCTGTCCCTTCTGTTGACAACAACATTGCGAATGAGCAAACAGGGACACGATCGTTTCTGAAGACAGGGATATACATAGCTAACATAGGA
ACAAAAGGAAGAAAATACAGGTTGAAAAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTCGACTCAA
ATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCGGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAATTTCGAAAAGC
TTGAAAATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTACCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAA
Protein sequenceShow/hide protein sequence
MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQTSLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIG
TKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA