; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0002945 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0002945
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr06:19219823..19221150
RNA-Seq ExpressionPay0002945
SyntenyPay0002945
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-16178.09Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---
        LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE         +I + +  S+            T  L   
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---

Query:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
                                                           GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
Subjt:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK

Query:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]7.5e-16177.84Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---
        LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH+ELLKKPQPVPNECTDQRWRWFE         +I + +  S+            T  L   
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---

Query:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
                                                           GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
Subjt:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK

Query:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

KAA0048361.1 retrotransposon protein [Cucumis melo var. makuwa]7.5e-16177.84Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---
        LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRW+WFE         +I + +  S+            T  L   
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---

Query:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
                                                           GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
Subjt:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK

Query:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

KAA0048364.1 retrotransposon protein [Cucumis melo var. makuwa]4.8e-16078.48Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFEVHICLELRTSN-------------TTTL----------
        LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWR    H+    R ++             T  L          
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFEVHICLELRTSN-------------TTTL----------

Query:  --------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILR
                                                    GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILR
Subjt:  --------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILR

Query:  GKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GKSYYPVEVQCRTILACCLLHNLINR+MTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]5.4e-15977.06Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVC QSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---
        LHIL HDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE         +I + +  S+            T  L   
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---

Query:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
                                                           GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHS ARNVIERAFGVLK
Subjt:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK

Query:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATT ADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7TXW1 Retrotransposon protein3.6e-16177.84Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---
        LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH+ELLKKPQPVPNECTDQRWRWFE         +I + +  S+            T  L   
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---

Query:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
                                                           GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
Subjt:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK

Query:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

A0A5A7TZ93 Retrotransposon protein2.3e-16078.48Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFEVHICLELRTSN-------------TTTL----------
        LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWR    H+    R ++             T  L          
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFEVHICLELRTSN-------------TTTL----------

Query:  --------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILR
                                                    GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILR
Subjt:  --------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILR

Query:  GKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GKSYYPVEVQCRTILACCLLHNLINR+MTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

A0A5A7U476 Retrotransposon protein3.6e-16177.84Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---
        LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRW+WFE         +I + +  S+            T  L   
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---

Query:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
                                                           GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
Subjt:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK

Query:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

A0A5A7U9H2 Retrotransposon protein2.6e-15977.06Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVC QSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---
        LHIL HDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE         +I + +  S+            T  L   
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---

Query:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
                                                           GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHS ARNVIERAFGVLK
Subjt:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK

Query:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATT ADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

A0A5D3BDX0 Retrotransposon protein1.6e-16178.09Show/hide
Query:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
        MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF
Subjt:  MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMF

Query:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---
        LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE         +I + +  S+            T  L   
Subjt:  LHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE--------VHICLELRTSN------------TTTL---

Query:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
                                                           GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK
Subjt:  ---------------------------------------------------GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK

Query:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
        GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ
Subjt:  GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ

SwissProt top hitse value%identityAlignment
Q17QR8 Putative nuclease HARBI11.2e-0437.84Show/hide
Query:  YHLQEW-RGPENAPSTSKEF-FNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL
        + L+ W   P + P T  E+ +NM HS+  +VIE+ F  L  R+  L   +G   Y  E     ILACC+LHN+
Subjt:  YHLQEW-RGPENAPSTSKEF-FNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL

Q96MB7 Putative nuclease HARBI11.2e-0437.84Show/hide
Query:  YHLQEW-RGPENAPSTSKEF-FNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL
        + L+ W   P + P T  E+ +NM HS+  +VIE+ F  L  R+  L   +G   Y  E     ILACC+LHN+
Subjt:  YHLQEW-RGPENAPSTSKEF-FNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL

Arabidopsis top hitse value%identityAlignment
AT4G10890.1 unknown protein3.6e-1232.9Show/hide
Query:  GLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD--QRWRWFEVHICLE----LRTSNTTTL
        GL   E V +EE VAMFL  +  +   R I   + +S   + R  + VL A+++   + LK  +    +      R   F  H        + +   TT 
Subjt:  GLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD--QRWRWFEVHICLE----LRTSNTTTL

Query:  GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL
        G+L P+R   YHL ++ G    P T +E FN KH   R+VI+R FGV K +W IL
Subjt:  GFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL

AT5G12010.1 unknown protein2.5e-0533.82Show/hide
Query:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVD
        FN K S  + V + AFG LKGRWA L+ ++   ++     + ACC+LHN+        + E  ++ +D
Subjt:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVD

AT5G28730.1 unknown protein2.4e-0824.18Show/hide
Query:  IHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLK-----KPQP
        I+ +++ C+   RM    F  LC +L    GL S+  + ++E VA+FL I A +   R I   F  + ETI R F+ VL A+ RL  E ++     + + 
Subjt:  IHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLK-----KPQP

Query:  VPNECTDQRWRWFEVHICLELRTSNTTTLG-----FLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQ
        + N   D    W  +   L + + N   +      F   + G      + R   +A  +    F++   S   +++  +   +G  A  R +     ++ 
Subjt:  VPNECTDQRWRWFEVHICLELRTSNTTTLG-----FLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQ

Query:  CRTILACCLL--HNLINREMTNFDIEDNIDEVDSTHATTAADDIH---YIETSNEWSQW----RDNLAEEMFT
            L   L   HN+ + +  N D E+N+  V + H  T   D +    IE S+E   +    RD +AE +++
Subjt:  CRTILACCLL--HNLINREMTNFDIEDNIDEVDSTHATTAADDIH---YIETSNEWSQW----RDNLAEEMFT

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.5e-1833.79Show/hide
Query:  LGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIE---------
        L FLAP+RG RYHLQE+ G    P T  E FN++H S RNVIER FG+ K R+AI +    +  + Q   +L C  LHN + +E  + + +         
Subjt:  LGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIE---------

Query:  DNIDEVDSTHATTAADDIHYIETSNE----WSQWRDNLAEEMFTE
        D ++   +   T   D+   +E   +     + WR ++AE+M+ +
Subjt:  DNIDEVDSTHATTAADDIHYIETSNE----WSQWRDNLAEEMFTE

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.8e-2026.24Show/hide
Query:  FRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRL---------HEE
        +++++G +  C ++ RMD+  F  LC LL+T   L  T  + +E  +A+FL I+ H+++ R +Q  F  SGETISRHFN VL AVI +         + +
Subjt:  FRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRL---------HEE

Query:  LLKKPQPVPNECT-------------------------------------DQRWRWF----------EVHICLELRTSNTTTL----------------G
         L+   P   +C                                      D R+ +           +  +   L   N   +                G
Subjt:  LLKKPQPVPNECT-------------------------------------DQRWRWF----------EVHICLELRTSNTTTL----------------G

Query:  FLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINRE
        F+APY G            N+   +KE FN +H      I R FG LK R+ IL     YP++ Q + ++A C LHN +  E
Subjt:  FLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAACACGAGTTGGCGTCTATTGTAAATGCGTTCATAGCATCCCAACGACAGTTGTTACTAATGTTGGAGCTCTTGAAGAACGATACGAAGAGGATAACGCACAT
CCCGTATGAAACTAGGCATAGGATTAGACAGTTAGCTTACTTTCGCATGATTCATGGGTCAGACCTTGTCTGTCGCCAAAGTACGAGAATGGACCGAAGATGTTTCGCCA
TTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGCGCACGATGTGAAAAAT
CGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCTGTCATTCGACTTCATGAGGAGCTGTTGAAAAAACCACA
ACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGGTACACATTTGTCTCGAACTACGTACTTCCAACACAACGACGTTAGGTTTCCTGGCACCATACA
GAGGCCAACGCTATCACTTACAAGAATGGCGTGGCCCTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTCAATATGAAACATTCTTCTGCTCGTAATGTAATCGAAAGA
GCATTCGGTGTCTTGAAGGGTCGATGGGCGATACTGCGGGGAAAGTCATACTATCCTGTAGAAGTTCAATGTCGCACAATACTCGCATGTTGTCTCCTCCACAACCTTAT
CAATAGGGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACCCACGCGACTACTGCCGCGGATGACATACATTACATAGAGACGTCGAATGAGT
GGAGTCAATGGAGGGACAACCTTGCAGAAGAAATGTTTACTGAATGGGAGTTGCGTAACCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGAACACGAGTTGGCGTCTATTGTAAATGCGTTCATAGCATCCCAACGACAGTTGTTACTAATGTTGGAGCTCTTGAAGAACGATACGAAGAGGATAACGCACAT
CCCGTATGAAACTAGGCATAGGATTAGACAGTTAGCTTACTTTCGCATGATTCATGGGTCAGACCTTGTCTGTCGCCAAAGTACGAGAATGGACCGAAGATGTTTCGCCA
TTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGCGCACGATGTGAAAAAT
CGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCTGTCATTCGACTTCATGAGGAGCTGTTGAAAAAACCACA
ACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGGTACACATTTGTCTCGAACTACGTACTTCCAACACAACGACGTTAGGTTTCCTGGCACCATACA
GAGGCCAACGCTATCACTTACAAGAATGGCGTGGCCCTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTCAATATGAAACATTCTTCTGCTCGTAATGTAATCGAAAGA
GCATTCGGTGTCTTGAAGGGTCGATGGGCGATACTGCGGGGAAAGTCATACTATCCTGTAGAAGTTCAATGTCGCACAATACTCGCATGTTGTCTCCTCCACAACCTTAT
CAATAGGGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACCCACGCGACTACTGCCGCGGATGACATACATTACATAGAGACGTCGAATGAGT
GGAGTCAATGGAGGGACAACCTTGCAGAAGAAATGTTTACTGAATGGGAGTTGCGTAACCAATAG
Protein sequenceShow/hide protein sequence
MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKN
RVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFEVHICLELRTSNTTTLGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIER
AFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEMFTEWELRNQ