| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042995.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 7.1e-166 | 47.61 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
MIIVN +S+ KPEVDWT+ +EQASVGNARALN IFNG VAYEGTSKVKISRLQL TSKFEALRMTEDES+SDYNK VL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
Query: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESID---
EIANESL+L VTAIEEAHDITTLKLDELFGSLLTFEM T +RESKKGK IAFKSTHV++E DT+ANM+E +
Subjt: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESID---
Query: ---LLIKQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEAR
+ + + K+ KN T S+ + + +D + N F +N+D +SE S + + E+L+ LWK+D EAR
Subjt: ---LLIKQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEAR
Query: AIQKERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQ
AIQKERIQD +EENERLMSNLD IL +G NG ++YGLGF AS T+EIKFVPAS+ + D + + K+ YYCG+K HIR CYKL+
Subjt: AIQKERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQ
Query: R-----------------------------------------------------------------------------------------------EILY
R ++ Y
Subjt: R-----------------------------------------------------------------------------------------------EILY
Query: VDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVN
VDGLKANLI++SQLCDQGY V+F CVV+NK+NQI M+G RQADNCYHW SN S+ C L + DQTWLWHRKLGH+ ++ +++ +KN+ V+G+PN+DVN
Subjt: VDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVN
Query: SKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLILQREKGVKIVRIRSDH
C DC KQT+++HKSLKEC TNRVLELLHMDLMG +QT+SLGGK DT ++ +LCL LQRE+ KI RIRSDH
Subjt: SKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLILQREKGVKIVRIRSDH
Query: DKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAK
KEF NE N+FC EG HHE+SAPIT QQNGVVERKNKTLQEMA+VM+HAK
Subjt: DKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAK
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| KAA0045252.1 gag-proteinase polyprotein [Cucumis melo var. makuwa] | 9.9e-160 | 68.32 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
MIIVN +SVLKPEVD T+ +EQAS+GNARALN IFNG VAYEGTSKVKISRLQLITSKFEAL MTEDE +SDYNKRVL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
Query: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLI
EIANESLML EKIPDSKIV+KVL+SLPR F LKV AIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGK IAFK THVS+E VSDTKANMNESIDLLI
Subjt: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLI
Query: KQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREY-----------------------------------
KQFSNV+KK KNLNTTGSNAQNLINYQRKDGENNTRR NENSNRRNSDYGRKKEGEGRVFRCRE
Subjt: KQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREY-----------------------------------
Query: ------------------ESEYSGQICYKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLM-------------------------------SNLD
ESE SGQIC KNFTFEEL+VLWK+D EARAIQKERIQD MEENERLM NLD
Subjt: ------------------ESEYSGQICYKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLM-------------------------------SNLD
Query: VILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREILY
VILNSGQNGLN++GLGFD S RKINTTTEI FVPASVN+KTD V ATKVV+PSAKTTKWI +YCG+KDHIRPFCYKL R+ILY
Subjt: VILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREILY
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| KAA0046862.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.5e-189 | 69.34 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNGVAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVLEIANESLMLGEKIPDSKIVQKVL
MIIVNS+ VLKPEVDWTNAKEQASVGNARALNVIFNGV +MTEDESLSDYNKRVLEIANESLMLGEKIPDSKIVQKVL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNGVAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVLEIANESLMLGEKIPDSKIVQKVL
Query: RSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLIKQFSNVVKKLKNLNTTGSNAQNL
RSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEM TTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLIKQFSNVVKK KNLNTTGSNAQNL
Subjt: RSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLIKQFSNVVKKLKNLNTTGSNAQNL
Query: INYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLMSNLDVILNSGQ
INYQRKDGENNTRR + NR S + KE C SG + + T R I K N +
Subjt: INYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLMSNLDVILNSGQ
Query: NGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREILYVDGLKANLISVSQLCDQGYSVNFS
N L P Y ++ YVDGLKANLISVSQLCDQGYSVNFS
Subjt: NGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREILYVDGLKANLISVSQLCDQGYSVNFS
Query: KDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKEC
KDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKEC
Subjt: KDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKEC
Query: STNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLIL
STNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLIL
Subjt: STNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLIL
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| KAA0054435.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 5.4e-166 | 52.68 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
MIIVN +SV KPE+DWT+A+EQASVG ARA+N IFNG VAYEGTSKVKIS+L+LITSKFEAL+MTEDE++S+YNKRVL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
Query: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVV--SDTKANMNESIDL
EI N+ L+LGEKI +SKIV KVLRSLPRKFD+KVTAI+EA DITTL LDELFGSLLTFEMA +DRESKKGK IAFKS + K+ V S +AN +ESI L
Subjt: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVV--SDTKANMNESIDL
Query: LIKQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEARAIQK
L KQFS + KK K LNT R D EN+ R+ N++S RRNSD+G+K E G
Subjt: LIKQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEARAIQK
Query: ERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREIL
+LD IL+SGQN +KYGLGFD ST+ + T E K VP ++I
Subjt: ERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREIL
Query: YVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDV
+ DG +I+ N K + +K+NQ+ M+G R++DNCYHW SN S +CHL K DQTWLWHRKLGHI L+S+D+ ++NE V+G+P++D+
Subjt: YVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDV
Query: NSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLILQREKGVKIVRIRSD
N K CGDC KQTK+SH LKEC T RVLELLH+DLMG +QTESLGGKKYV VV +D+SRFTWV FLK K DT K+ ISLCL LQ EKG KI+RIRSD
Subjt: NSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLILQREKGVKIVRIRSD
Query: HDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAK
H+KEF NE+LNNFC EGIHHE +APIT QQNGVVERKN+TLQEMA+VM+HAK
Subjt: HDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAK
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| XP_008444307.1 PREDICTED: uncharacterized protein LOC103487675 [Cucumis melo] | 1.9e-267 | 80.62 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
MIIVN +SVLKPEVD T+ +EQAS+GNARALN IFNG VAYEGTSKVKISRLQLITSKFEAL MTEDE +SDYNKRVL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
Query: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLI
EIANESLML EKIPDSKIV+KVL+SLPR F LKV AIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGK IAFK THVS+E VSDTKANMNESIDLLI
Subjt: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLI
Query: KQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREY--------------------------ESEYSGQIC
KQFSNV+KK KNLNTTGSNAQNLINYQRKDGENNTRR NENSNRRNSDYGRKKEGEGRVFRCREY ESE SGQIC
Subjt: KQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREY--------------------------ESEYSGQIC
Query: YKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTK
KNFTFEEL+VLWK+D EAR ++ ++ + E NLDVILNSGQNGLN++GLGFD S RKINTTTEI FVPASVN+KTD V ATKVV+PSAKTTK
Subjt: YKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTK
Query: WIWYYCGKKDHIRPFCYKLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLG
WI +YCG+KDHIRPFCYKL R+ILYVDGLKANLISVS+LCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISN+SEVCHLNKEDQT LWHRKLG
Subjt: WIWYYCGKKDHIRPFCYKLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLG
Query: HIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTP
HIDLKSID T+KNEVVIGVPNIDVNSKLVC DCLTEKQTKASHKSLKECSTNRVLELLHMDLMG LQTESLGGKKYVFV EEDFSRFTWVRFLKDKYDTP
Subjt: HIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTP
Query: KVYISLCLILQREK
KV ISLCLILQREK
Subjt: KVYISLCLILQREK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BAW0 uncharacterized protein LOC103487675 | 9.0e-268 | 80.62 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
MIIVN +SVLKPEVD T+ +EQAS+GNARALN IFNG VAYEGTSKVKISRLQLITSKFEAL MTEDE +SDYNKRVL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
Query: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLI
EIANESLML EKIPDSKIV+KVL+SLPR F LKV AIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGK IAFK THVS+E VSDTKANMNESIDLLI
Subjt: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLI
Query: KQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREY--------------------------ESEYSGQIC
KQFSNV+KK KNLNTTGSNAQNLINYQRKDGENNTRR NENSNRRNSDYGRKKEGEGRVFRCREY ESE SGQIC
Subjt: KQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREY--------------------------ESEYSGQIC
Query: YKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTK
KNFTFEEL+VLWK+D EAR ++ ++ + E NLDVILNSGQNGLN++GLGFD S RKINTTTEI FVPASVN+KTD V ATKVV+PSAKTTK
Subjt: YKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTK
Query: WIWYYCGKKDHIRPFCYKLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLG
WI +YCG+KDHIRPFCYKL R+ILYVDGLKANLISVS+LCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISN+SEVCHLNKEDQT LWHRKLG
Subjt: WIWYYCGKKDHIRPFCYKLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLG
Query: HIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTP
HIDLKSID T+KNEVVIGVPNIDVNSKLVC DCLTEKQTKASHKSLKECSTNRVLELLHMDLMG LQTESLGGKKYVFV EEDFSRFTWVRFLKDKYDTP
Subjt: HIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTP
Query: KVYISLCLILQREK
KV ISLCLILQREK
Subjt: KVYISLCLILQREK
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| A0A5A7TNK7 Gag-pol polyprotein | 3.4e-166 | 47.61 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
MIIVN +S+ KPEVDWT+ +EQASVGNARALN IFNG VAYEGTSKVKISRLQL TSKFEALRMTEDES+SDYNK VL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
Query: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESID---
EIANESL+L VTAIEEAHDITTLKLDELFGSLLTFEM T +RESKKGK IAFKSTHV++E DT+ANM+E +
Subjt: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESID---
Query: ---LLIKQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEAR
+ + + K+ KN T S+ + + +D + N F +N+D +SE S + + E+L+ LWK+D EAR
Subjt: ---LLIKQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEAR
Query: AIQKERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQ
AIQKERIQD +EENERLMSNLD IL +G NG ++YGLGF AS T+EIKFVPAS+ + D + + K+ YYCG+K HIR CYKL+
Subjt: AIQKERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQ
Query: R-----------------------------------------------------------------------------------------------EILY
R ++ Y
Subjt: R-----------------------------------------------------------------------------------------------EILY
Query: VDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVN
VDGLKANLI++SQLCDQGY V+F CVV+NK+NQI M+G RQADNCYHW SN S+ C L + DQTWLWHRKLGH+ ++ +++ +KN+ V+G+PN+DVN
Subjt: VDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVN
Query: SKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLILQREKGVKIVRIRSDH
C DC KQT+++HKSLKEC TNRVLELLHMDLMG +QT+SLGGK DT ++ +LCL LQRE+ KI RIRSDH
Subjt: SKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLILQREKGVKIVRIRSDH
Query: DKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAK
KEF NE N+FC EG HHE+SAPIT QQNGVVERKNKTLQEMA+VM+HAK
Subjt: DKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAK
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| A0A5A7TPF7 Gag-proteinase polyprotein | 4.8e-160 | 68.32 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
MIIVN +SVLKPEVD T+ +EQAS+GNARALN IFNG VAYEGTSKVKISRLQLITSKFEAL MTEDE +SDYNKRVL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
Query: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLI
EIANESLML EKIPDSKIV+KVL+SLPR F LKV AIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGK IAFK THVS+E VSDTKANMNESIDLLI
Subjt: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLI
Query: KQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREY-----------------------------------
KQFSNV+KK KNLNTTGSNAQNLINYQRKDGENNTRR NENSNRRNSDYGRKKEGEGRVFRCRE
Subjt: KQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREY-----------------------------------
Query: ------------------ESEYSGQICYKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLM-------------------------------SNLD
ESE SGQIC KNFTFEEL+VLWK+D EARAIQKERIQD MEENERLM NLD
Subjt: ------------------ESEYSGQICYKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLM-------------------------------SNLD
Query: VILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREILY
VILNSGQNGLN++GLGFD S RKINTTTEI FVPASVN+KTD V ATKVV+PSAKTTKWI +YCG+KDHIRPFCYKL R+ILY
Subjt: VILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREILY
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| A0A5A7TTT8 Gag-pol polyprotein | 2.2e-189 | 69.34 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNGVAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVLEIANESLMLGEKIPDSKIVQKVL
MIIVNS+ VLKPEVDWTNAKEQASVGNARALNVIFNGV +MTEDESLSDYNKRVLEIANESLMLGEKIPDSKIVQKVL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNGVAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVLEIANESLMLGEKIPDSKIVQKVL
Query: RSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLIKQFSNVVKKLKNLNTTGSNAQNL
RSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEM TTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLIKQFSNVVKK KNLNTTGSNAQNL
Subjt: RSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVVSDTKANMNESIDLLIKQFSNVVKKLKNLNTTGSNAQNL
Query: INYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLMSNLDVILNSGQ
INYQRKDGENNTRR + NR S + KE C SG + + T R I K N +
Subjt: INYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEARAIQKERIQDFMEENERLMSNLDVILNSGQ
Query: NGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREILYVDGLKANLISVSQLCDQGYSVNFS
N L P Y ++ YVDGLKANLISVSQLCDQGYSVNFS
Subjt: NGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREILYVDGLKANLISVSQLCDQGYSVNFS
Query: KDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKEC
KDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKEC
Subjt: KDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKEC
Query: STNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLIL
STNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLIL
Subjt: STNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLIL
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| A0A5D3CS19 Gag-pol polyprotein | 2.6e-166 | 52.68 | Show/hide |
Query: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
MIIVN +SV KPE+DWT+A+EQASVG ARA+N IFNG VAYEGTSKVKIS+L+LITSKFEAL+MTEDE++S+YNKRVL
Subjt: MIIVNSISVLKPEVDWTNAKEQASVGNARALNVIFNG-----------------------VAYEGTSKVKISRLQLITSKFEALRMTEDESLSDYNKRVL
Query: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVV--SDTKANMNESIDL
EI N+ L+LGEKI +SKIV KVLRSLPRKFD+KVTAI+EA DITTL LDELFGSLLTFEMA +DRESKKGK IAFKS + K+ V S +AN +ESI L
Subjt: EIANESLMLGEKIPDSKIVQKVLRSLPRKFDLKVTAIEEAHDITTLKLDELFGSLLTFEMATTDRESKKGKRIAFKSTHVSKEVV--SDTKANMNESIDL
Query: LIKQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEARAIQK
L KQFS + KK K LNT R D EN+ R+ N++S RRNSD+G+K E G
Subjt: LIKQFSNVVKKLKNLNTTGSNAQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGEGRVFRCREYESEYSGQICYKNFTFEELKVLWKKDSEARAIQK
Query: ERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREIL
+LD IL+SGQN +KYGLGFD ST+ + T E K VP ++I
Subjt: ERIQDFMEENERLMSNLDVILNSGQNGLNKYGLGFDASTRKINTTTEIKFVPASVNNKTDIVTATKVVNPSAKTTKWIWYYCGKKDHIRPFCYKLQREIL
Query: YVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDV
+ DG +I+ N K + +K+NQ+ M+G R++DNCYHW SN S +CHL K DQTWLWHRKLGHI L+S+D+ ++NE V+G+P++D+
Subjt: YVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCHLNKEDQTWLWHRKLGHIDLKSIDRTVKNEVVIGVPNIDV
Query: NSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLILQREKGVKIVRIRSD
N K CGDC KQTK+SH LKEC T RVLELLH+DLMG +QTESLGGKKYV VV +D+SRFTWV FLK K DT K+ ISLCL LQ EKG KI+RIRSD
Subjt: NSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLILQREKGVKIVRIRSD
Query: HDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAK
H+KEF NE+LNNFC EGIHHE +APIT QQNGVVERKN+TLQEMA+VM+HAK
Subjt: HDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAK
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-27 | 30.22 | Show/hide |
Query: CYKLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCH-----LNKEDQTWLWHRKLGHIDLKSIDRT
C + +++ +V L+ NLIS L GY F+ + K + ++ G + N+E+C E LWH+++GH+ K +
Subjt: CYKLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWISNNSEVCH-----LNKEDQTWLWHRKLGHIDLKSIDRT
Query: VKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLIL
K ++ V C CL KQ + S ++ E N +L+L++ D+ G ++ ES+GG KY +D SR WV LK K +V+ ++
Subjt: VKNEVVIGVPNIDVNSKLVCGDCLTEKQTKASHKSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDKYDTPKVYISLCLIL
Query: QREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAKK
+RE G K+ R+RSD+ E+ + +C S GI HE + P T Q NGV ER N+T+ E + ML K
Subjt: QREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLHAKK
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| P25384 Transposon Ty2-C Gag-Pol polyprotein | 2.2e-16 | 24.56 | Show/hide |
Query: KLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWIS---------NNSEVCHLNKEDQT-----WLWHRKLGHID
K + L+ + +L+S+S+L +Q + F+++ + D +L + D ++W+S + + ++NK L HR LGH +
Subjt: KLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWIS---------NNSEVCHLNKEDQT-----WLWHRKLGHID
Query: LKSIDRTVKNEVVIGVPNIDVN----SKLVCGDCLTEKQTKASH---KSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDK
+SI +++K V + D+ S C DCL K TK H LK + + LH D+ G + Y ++ +RF WV L D+
Subjt: LKSIDRTVKNEVVIGVPNIDVN----SKLVCGDCLTEKQTKASH---KSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDK
Query: YDTP--KVYISLCLILQREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLH
+ V+ S+ ++ + +++ I+ D E+ N+ L+ F + GI Y+ S+ +GV ER N+TL + +LH
Subjt: YDTP--KVYISLCLILQREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLH
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| Q03494 Transposon Ty2-DR2 Gag-Pol polyprotein | 2.2e-16 | 24.56 | Show/hide |
Query: KLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWIS---------NNSEVCHLNKEDQT-----WLWHRKLGHID
K + L+ + +L+S+S+L +Q + F+++ + D +L + D ++W+S + + ++NK L HR LGH +
Subjt: KLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWIS---------NNSEVCHLNKEDQT-----WLWHRKLGHID
Query: LKSIDRTVKNEVVIGVPNIDVN----SKLVCGDCLTEKQTKASH---KSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDK
+SI +++K V + D+ S C DCL K TK H LK + + LH D+ G + Y ++ +RF WV L D+
Subjt: LKSIDRTVKNEVVIGVPNIDVN----SKLVCGDCLTEKQTKASH---KSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDK
Query: YDTP--KVYISLCLILQREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLH
+ V+ S+ ++ + +++ I+ D E+ N+ L+ F + GI Y+ S+ +GV ER N+TL + +LH
Subjt: YDTP--KVYISLCLILQREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLH
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| Q12472 Transposon Ty2-DR1 Gag-Pol polyprotein | 2.2e-16 | 24.56 | Show/hide |
Query: KLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWIS---------NNSEVCHLNKEDQT-----WLWHRKLGHID
K + L+ + +L+S+S+L +Q + F+++ + D +L + D ++W+S + + ++NK L HR LGH +
Subjt: KLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWIS---------NNSEVCHLNKEDQT-----WLWHRKLGHID
Query: LKSIDRTVKNEVVIGVPNIDVN----SKLVCGDCLTEKQTKASH---KSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDK
+SI +++K V + D+ S C DCL K TK H LK + + LH D+ G + Y ++ +RF WV L D+
Subjt: LKSIDRTVKNEVVIGVPNIDVN----SKLVCGDCLTEKQTKASH---KSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDK
Query: YDTP--KVYISLCLILQREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLH
+ V+ S+ ++ + +++ I+ D E+ N+ L+ F + GI Y+ S+ +GV ER N+TL + +LH
Subjt: YDTP--KVYISLCLILQREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLH
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 2.2e-16 | 24.56 | Show/hide |
Query: KLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWIS---------NNSEVCHLNKEDQT-----WLWHRKLGHID
K + L+ + +L+S+S+L +Q + F+++ + D +L + D ++W+S + + ++NK L HR LGH +
Subjt: KLQREILYVDGLKANLISVSQLCDQGYSVNFSKDNCVVINKDNQILMNGSRQADNCYHWIS---------NNSEVCHLNKEDQT-----WLWHRKLGHID
Query: LKSIDRTVKNEVVIGVPNIDVN----SKLVCGDCLTEKQTKASH---KSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDK
+SI +++K V + D+ S C DCL K TK H LK + + LH D+ G + Y ++ +RF WV L D+
Subjt: LKSIDRTVKNEVVIGVPNIDVN----SKLVCGDCLTEKQTKASH---KSLKECSTNRVLELLHMDLMGLLQTESLGGKKYVFVVEEDFSRFTWVRFLKDK
Query: YDTP--KVYISLCLILQREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLH
+ V+ S+ ++ + +++ I+ D E+ N+ L+ F + GI Y+ S+ +GV ER N+TL + +LH
Subjt: YDTP--KVYISLCLILQREKGVKIVRIRSDHDKEFKNENLNNFCDSEGIHHEYSAPITSQQNGVVERKNKTLQEMAQVMLH
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