CuGenDBv2

Gene ID	Pay0003034
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	chr09:613437..618333
RNA-Seq Expression	Pay0003034
Synteny	Pay0003034
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039269.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa]

0.0e+00

99.1

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Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQ-VFDLVNHE
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQ VFDLVNHE
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQ-VFDLVNHE

Query:  AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKS
        AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKL NPNHITFEIYLQQIFHELVFVKS
Subjt:  AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKS

Query:  NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKT
        NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKT
Subjt:  NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKT

Query:  QFLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFLTKVVVND+CITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
        DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

XP_008459609.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo]

0.0e+00

99.24

Show/hide

Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKL NPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ

Query:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVND+CITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

XP_011656092.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus]

0.0e+00

96.83

Show/hide

Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLPVKRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLDGIELPDRSDPLEKKL NPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD YQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ

Query:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVND+CITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

XP_022987637.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0e+00

90.48

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Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLPVKRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
        FRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+ENPLE  KN++TN SNQ+ ++ EKEFTNDDEYIKETNSLLRQVHHAIF EQVFD VN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQSCQTVE AN+ ILDN NLPFDSLDGIELPDRSDPLEKKL NPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP+S LHP SIQARTSDS++MN+VTK+Q
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ

Query:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVND+CITIEGEGAP+VVGLF GNSKD+YS NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
         QGCLSWWLVMDDGLMEDRK NF  SDVVPEYRKFLG+LSLEVL STLMDLVSLCSG GGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

XP_038889914.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida]

0.0e+00

93.05

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Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
        FRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLE  KN++TN SNQ+S+ REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSV ISLVPSGQSCQTVEGAN+ ILDNANLPFDSLDGIELPDRSDP EKKL NPNHITFEIYLQQIFHELVFV+SN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
        DRP S+LSRQSGQ +NDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQA TSD++QMNN+TK+Q
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ

Query:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVND+CITIEGEGAPNVVGLFNGNSKDI+S NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGE LRLVAHVDP+D
Subjt:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMED+KL+F++SDV+PEYRKFLG+LSLEVLHSTLMDLVSLCSGVG SL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXX2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

96.83

Show/hide

Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLPVKRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLE DKN++TNPSNQ+SV REKEFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQS QTVEGANSEIL+NA+LPFDSLDGIELPDRSDPLEKKL NPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPNSI+ARTSD YQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ

Query:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVND+CITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEAL WGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

99.24

Show/hide

Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKL NPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ

Query:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVND+CITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

A0A5A7TDC1 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

99.1

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Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQ-VFDLVNHE
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQ VFDLVNHE
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQ-VFDLVNHE

Query:  AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKS
        AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKL NPNHITFEIYLQQIFHELVFVKS
Subjt:  AFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKS

Query:  NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKT
        NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKT
Subjt:  NDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKT

Query:  QFLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFLTKVVVND+CITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
        DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  DPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

99.24

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Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MDED+KVSLDKLP+KRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
        FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN
        FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKL NPNHITFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
        DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ

Query:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        FLTKVVVND+CITIEGEGAPNVVGLFNGNSKDIY TNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
        PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

A0A6J1JAW7 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.48

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Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVSLDKLPVKRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSV

Query:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA
        FRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+ENPLE  KN++TN SNQ+ ++ EKEFTNDDEYIKETNSLLRQVHHAIF EQVFD VN EA
Subjt:  FRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEA

Query:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQSCQTVE AN+ ILDN NLPFDSLDGIELPDRSDPLEKKL NPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSN

Query:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP+S LHP SIQARTSDS++MN+VTK+Q
Subjt:  DRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQ

Query:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVND+CITIEGEGAP+VVGLF GNSKD+YS NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED

Query:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL
         QGCLSWWLVMDDGLMEDRK NF  SDVVPEYRKFLG+LSLEVL STLMDLVSLCSG GGSL
Subjt:  PQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

5.4e-212

58.42

Show/hide

Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDE--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVE
        MD D+++SLD+LP+KRLE+IEENG ERFP+DV Y++KR+SLIRRIDFAWA+E++DE  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDE--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+L+DL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVN
        S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  E D++  +   +      EK   +DD+Y+KET+SLLR+VH +IF EQ+FD++N
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVN

Query:  HEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFV
         EAFN  VG N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F 
Subjt:  HEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFV

Query:  KSNDRPISSLSRQSGQVSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNV
        K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP SI+     + ++ D       
Subjt:  KSNDRPISSLSRQSGQVSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNV

Query:  TKTQFLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV
         KTQF TKVVV D+CI++E E  PNVVGL   +S +++S N+Y CD+ADLPV+IL QVASQI+ WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKTQFLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLC
        +PED +GC+SWWLVM++G  E+R       + V E RK LG+LSL+VL+S LMDL++LC
Subjt:  DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLC

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

3.8e-213

58.42

Show/hide

Query:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDE--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVE
        MD D+++SLD+LP+KRLE+IEENG ERFP+DV Y++KR+SLIRRIDFAWA+E++DE  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDE--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS
        ANDAVTVAGMTRPKP+PNE+L+DL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS

Query:  SVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVN
        S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  E D++  +   +      EK   +DD+Y+KET+SLLR+VH +IF EQ+FD++N
Subjt:  SVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVN

Query:  HEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFV
         EAFN  VG N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +S   +E  +  D   KKL  PN  ++EIYLQQIFHE  F 
Subjt:  HEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFV

Query:  KSNDRPISSLSRQSGQVSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNV
        K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP SI+     + ++ D       
Subjt:  KSNDRPISSLSRQSGQVSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNV

Query:  TKTQFLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV
         KTQF TKVVV D+CI++E E  PNVVGL   +S +++S N+Y CD+ADLPV+IL QVASQI+ WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKTQFLTKVVVNDNCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLC
        +PED +GC+SWWLVM++G  E+R       + V E RK LG+LSL+VL+S LMDL++LC
Subjt:  DPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGAAGACATAAAAGTTTCTCTTGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAATGGTCTCGAACGATTTCCAACAGATGTTGGTTATGAA
GAGAAACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGATGATGAAAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCG
TGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGTGGAAGCTAATGATGCAGTAACTGTG
GCTGGAATGACAAGGCCAAAACCATTACCTAATGAAGTTCTAGCAGATCTTGGAGTTTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAATATTTC
AAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAACTGGAAGGTTAAAAGGCAGCGAGTG
GCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCATGTGATCCTTCATCTGTGTTTCGACCATCTTCATCTACTATTCGTGTT
GATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTTTGGAA
CATGATAAAAATGACACTACAAATCCTTCCAATCAGACTTCGGTAAAAAGGGAAAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTC
CGTCAAGTTCACCATGCCATTTTCTGCGAGCAGGTGTTTGATTTGGTGAATCATGAAGCATTCAATCCATCCGTAGGTATCAACGTGACTGGCATACGAGAAAAT
TACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTAGTGCCATCTGGTCAAAGTTGCCAAACAGTTGAAGGTGCCAATTCCGAGATTCTGGAT
AATGCAAATTTGCCTTTTGATTCGCTTGATGGGATTGAATTACCAGATAGAAGTGATCCACTTGAAAAGAAATTGTGGAATCCAAATCATATAACTTTTGAGATA
TATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCGGGTCAAGTTTCTAATGATGGGTCTGGA
CTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTCGCAAACAATGTTCTCATGGAGCTTGAAAATGTGGTCTGGAAAGTCCCATTTCTTCAATTGATA
TCTCATCCCACTTGGAATTCTCGAAAATCATCTTGGACGTTTTTCATGGAAGTTCCTCGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGT
TATCAAATGAATAATGTAACCAAAACACAGTTTTTGACTAAAGTTGTTGTAAATGATAATTGCATTACTATCGAAGGAGAAGGTGCACCAAATGTTGTTGGCTTG
TTCAACGGAAATTCCAAGGATATCTATTCGACGAACAGATACAGCTGTGACTTGGCCGATCTTCCTGTTATAATTCTGTTGCAGGTTGCGAGCCAGATTATTCTT
TGGCTTCATGAGGAGGCTCTAACCTGGGGAATAAAGGCCAACCGCGACTTCCTAAGTCTGTCATTTGAGCTTGAACAAGGTGAAACACTCCGGCTGGTAGCCCAT
GTGGACCCAGAAGATCCTCAAGGATGTCTTTCATGGTGGTTGGTAATGGACGATGGGTTGATGGAGGACAGGAAACTTAACTTTGAGACTTCAGATGTTGTGCCT
GAATACAGGAAGTTTTTGGGGAATTTATCTCTAGAAGTTTTGCATTCAACATTAATGGATTTGGTTAGTTTGTGCAGTGGGGTTGGTGGTAGCCTATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDEDIKVSLDKLPVKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTVEANDAVTV
AGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRV
DHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEAFNPSVGINVTGIREN
YLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLWNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSG
LLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQFLTKVVVNDNCITIEGEGAPNVVGL
FNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVP
EYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL

Pay0003034 (gene) of Melon (Payzawat) v1 genome