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Pay0003191 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003191
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag-pol polyprotein
Genome locationchr11:25401729..25422962
RNA-Seq ExpressionPay0003191
SyntenyPay0003191
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040963.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.4e-6278.11Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S  P+LD                  DGKAWRALVA YDPPMITVNGV +PK EVDWTDAEEQASVGNARALNAIFN VDLNVFKLINSC+
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
         +KEAWKTLEVAYEGTSKV ISRLQL+T  FEALRMTEDESVSDYNKRVLEIAN+SLLL+EKIPDS+IV
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
KAA0056213.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-6279.29Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S PPVLD                  DGKAWRALVA YDPPMIT NGVS+PK EVDWTDAEEQASVGNARA NAIFN VDLN+FKLINSC+
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
         AKEAWKTLEVAYEGTSKV ISRLQL+T  FEALRMTEDESV DYNKRVLEIANESLLL EKIPDSKIV
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
KAA0065373.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.9e-6075.74Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S PPVLD                  DGKAWRALVA YDPPMIT NGVS+PK EVDW D EE A VGNAR LNAIFN +DLNVFKLINSCN
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
          KEAWKTLEVAYEGTSKV ISRLQL+T  FEALRMT+DE V DYNKRVLEIANESLLL+EKIPDSKIV
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
TYK02457.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.1e-6179.29Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S  PVLD                  DGKAWRALVA YDPPMITVNGVS+PK EVDWTDAEEQASVGNARALN IFN VDLNVFKLINSC+
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
         AKEAWKTLEVA EGTSKV ISRLQL+T  FEALRMTEDESVSDYNKRVLEIANESLLL EKIPDSK+V
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
TYK18530.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.5e-6076.33Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S+PPVLD                   GKAWRALVA YDP MI VNGVS+PK EVDWTDA+E+ASVGNAR LNAIFN VDLNVFKLINSC+
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
         AKEAWKTLEVAYEGTSKV ISRLQL+T  FEALRMTEDESVS+YNKRV+EI NESLLL EKIPDSKIV
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
TrEMBL top hitse value%identityAlignment
A0A5A7TCV9 Gag-pol polyprotein4.1e-6278.11Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S  P+LD                  DGKAWRALVA YDPPMITVNGV +PK EVDWTDAEEQASVGNARALNAIFN VDLNVFKLINSC+
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
         +KEAWKTLEVAYEGTSKV ISRLQL+T  FEALRMTEDESVSDYNKRVLEIAN+SLLL+EKIPDS+IV
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
A0A5A7UJR8 Putative mitochondrial protein6.3e-6379.29Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S PPVLD                  DGKAWRALVA YDPPMIT NGVS+PK EVDWTDAEEQASVGNARA NAIFN VDLN+FKLINSC+
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
         AKEAWKTLEVAYEGTSKV ISRLQL+T  FEALRMTEDESV DYNKRVLEIANESLLL EKIPDSKIV
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
A0A5A7VB22 Gag-pol polyprotein3.8e-6075.74Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S PPVLD                  DGKAWRALVA YDPPMIT NGVS+PK EVDW D EE A VGNAR LNAIFN +DLNVFKLINSCN
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
          KEAWKTLEVAYEGTSKV ISRLQL+T  FEALRMT+DE V DYNKRVLEIANESLLL+EKIPDSKIV
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
A0A5D3BSP9 Gag-proteinase polyprotein5.3e-6279.29Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S  PVLD                  DGKAWRALVA YDPPMITVNGVS+PK EVDWTDAEEQASVGNARALN IFN VDLNVFKLINSC+
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
         AKEAWKTLEVA EGTSKV ISRLQL+T  FEALRMTEDESVSDYNKRVLEIANESLLL EKIPDSK+V
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
A0A5D3D4T1 Gag-pol polyprotein1.7e-6076.33Show/hide
Query:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN
        MEIIREGPS S+PPVLD                   GKAWRALVA YDP MI VNGVS+PK EVDWTDA+E+ASVGNAR LNAIFN VDLNVFKLINSC+
Subjt:  MEIIREGPSTSYPPVLD------------------DGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCN

Query:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
         AKEAWKTLEVAYEGTSKV ISRLQL+T  FEALRMTEDESVS+YNKRV+EI NESLLL EKIPDSKIV
Subjt:  AAKEAWKTLEVAYEGTSKVDISRLQLMT--FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAATCAGAGAGGGACCATCAACTTCTTATCCTCCTGTTTTAGATGATGGAAAAGCTTGGAGAGCTCTTGTGGCGGATTATGATCCTCCTATGATTACAGTGAA
TGGTGTTTCGATTCCTAAATCTGAAGTTGATTGGACCGATGCTGAAGAGCAAGCATCCGTTGGGAATGCTAGAGCACTTAACGCAATATTCAATAGTGTTGACCTGAACG
TTTTCAAGTTAATAAATTCTTGCAATGCAGCCAAAGAAGCTTGGAAAACCTTGGAGGTTGCGTATGAAGGCACTTCCAAAGTGGATATTTCAAGATTACAGTTAATGACT
TTTGAGGCATTAAGAATGACCGAGGATGAATCAGTGTCTGACTACAATAAGAGAGTGCTTGAAATCGCAAATGAATCCCTGTTGCTCGAAGAAAAGATACCTGACTCTAA
AATAGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAATCAGAGAGGGACCATCAACTTCTTATCCTCCTGTTTTAGATGATGGAAAAGCTTGGAGAGCTCTTGTGGCGGATTATGATCCTCCTATGATTACAGTGAA
TGGTGTTTCGATTCCTAAATCTGAAGTTGATTGGACCGATGCTGAAGAGCAAGCATCCGTTGGGAATGCTAGAGCACTTAACGCAATATTCAATAGTGTTGACCTGAACG
TTTTCAAGTTAATAAATTCTTGCAATGCAGCCAAAGAAGCTTGGAAAACCTTGGAGGTTGCGTATGAAGGCACTTCCAAAGTGGATATTTCAAGATTACAGTTAATGACT
TTTGAGGCATTAAGAATGACCGAGGATGAATCAGTGTCTGACTACAATAAGAGAGTGCTTGAAATCGCAAATGAATCCCTGTTGCTCGAAGAAAAGATACCTGACTCTAA
AATAGTATAG
Protein sequenceShow/hide protein sequence
MEIIREGPSTSYPPVLDDGKAWRALVADYDPPMITVNGVSIPKSEVDWTDAEEQASVGNARALNAIFNSVDLNVFKLINSCNAAKEAWKTLEVAYEGTSKVDISRLQLMT
FEALRMTEDESVSDYNKRVLEIANESLLLEEKIPDSKIV