CuGenDBv2

Gene ID	Pay0003237
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	CCHC-type domain-containing protein
Genome location	chr10:23528423..23529254
RNA-Seq Expression	Pay0003237
Synteny	Pay0003237
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050358.1 uncharacterized protein E6C27_scaffold88G00900 [Cucumis melo var. makuwa]

6.1e-92

86.06

Show/hide

Query:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV
        M GQ QS LMS DLN PFRFEGAHFKRWKQKMLFFLTLKKVAT CTTEKLKVSEKDP EEQLKNLATWTETDFI KNLILNGLTDELYDYYSTMTT KEV
Subjt:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV

Query:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE
        WDA QKKYDT+E  SKKYAV+ YLRYQ+T+D+SVE QSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLP LWKDFKNTLRHKTK FSLESLITRL+IE E
Subjt:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE

Query:  ARKHDKKE
             KK+
Subjt:  ARKHDKKE

KAA0050409.1 hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]

2.9e-102

81.15

Show/hide

Query:  LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKY
        LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEK KVSEKDP +EQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTT K+VW+ALQKKY
Subjt:  LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKY

Query:  DTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKE
        DT+EA SKKYAVSRYLRYQMTDD+SVE QSHEIQKIAHEII+EGMPLDDQFQV +IIDKL  LWKDFKNTLRHKTKEFSLE+L TRL+IEEEA+KHDKKE
Subjt:  DTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKE

Query:  E------------------PKGNKMKRESNKQNNPQSKSMVQIV
        E                  PKGNKMK+  NKQNNPQS SM  ++
Subjt:  E------------------PKGNKMKRESNKQNNPQSKSMVQIV

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]

2.2e-102

94.15

Show/hide

Query:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV
        M GQIQSDLMSSDLNR FRFEGAHFKRWKQK+LFFLTLKKVATACTTEK KVSEKDP EEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTT KEV
Subjt:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV

Query:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE
        WDALQKKYDT+EA SKKYAVSRYLRYQMTDDKSVE QSHEIQKIAHEIISEGMPLDDQFQV VIIDKLP LWKDFKNTLRHKTKEFSLESLITRL+IEEE
Subjt:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE

Query:  ARKHD
        ARKHD
Subjt:  ARKHD

KAA0065374.1 uncharacterized protein E6C27_scaffold17G00360 [Cucumis melo var. makuwa]

1.5e-111

100

Show/hide

Query:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV
        MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV
Subjt:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV

Query:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE
        WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE
Subjt:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE

Query:  ARKHDKKEE
        ARKHDKKEE
Subjt:  ARKHDKKEE

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]

2.9e-102

81.15

Show/hide

Query:  LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKY
        LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACT EK KVSEKDP +EQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTT K+VW+ALQKKY
Subjt:  LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKY

Query:  DTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKE
        DT+EA SKKYAVSRYLRYQMTDD+SVE QSHEIQKIAHEII+EGMPLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LITRLKIEEEA+K DKK+
Subjt:  DTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKE

Query:  E------------------PKGNKMKRESNKQNNPQSKSMVQIV
        E                  PKGNKMK+  NKQNNPQS SM  ++
Subjt:  E------------------PKGNKMKRESNKQNNPQSKSMVQIV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UA92 Uncharacterized protein

1.4e-102

81.15

Show/hide

Query:  LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKY
        LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEK KVSEKDP +EQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTT K+VW+ALQKKY
Subjt:  LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKY

Query:  DTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKE
        DT+EA SKKYAVSRYLRYQMTDD+SVE QSHEIQKIAHEII+EGMPLDDQFQV +IIDKL  LWKDFKNTLRHKTKEFSLE+L TRL+IEEEA+KHDKKE
Subjt:  DTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKE

Query:  E------------------PKGNKMKRESNKQNNPQSKSMVQIV
        E                  PKGNKMK+  NKQNNPQS SM  ++
Subjt:  E------------------PKGNKMKRESNKQNNPQSKSMVQIV

A0A5A7UYY4 Uncharacterized protein

1.1e-102

94.15

Show/hide

Query:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV
        M GQIQSDLMSSDLNR FRFEGAHFKRWKQK+LFFLTLKKVATACTTEK KVSEKDP EEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTT KEV
Subjt:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV

Query:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE
        WDALQKKYDT+EA SKKYAVSRYLRYQMTDDKSVE QSHEIQKIAHEIISEGMPLDDQFQV VIIDKLP LWKDFKNTLRHKTKEFSLESLITRL+IEEE
Subjt:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE

Query:  ARKHD
        ARKHD
Subjt:  ARKHD

A0A5D3BDS3 Uncharacterized protein

1.4e-102

81.15

Show/hide

Query:  LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKY
        LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACT EK KVSEKDP +EQLKNL TWTETDFICKNLILNGLTDELYDYYSTMTT K+VW+ALQKKY
Subjt:  LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKY

Query:  DTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKE
        DT+EA SKKYAVSRYLRYQMTDD+SVE QSHEIQKIAHEII+EGMPLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LITRLKIEEEA+K DKK+
Subjt:  DTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKE

Query:  E------------------PKGNKMKRESNKQNNPQSKSMVQIV
        E                  PKGNKMK+  NKQNNPQS SM  ++
Subjt:  E------------------PKGNKMKRESNKQNNPQSKSMVQIV

A0A5D3BV12 Uncharacterized protein

2.9e-92

86.06

Show/hide

Query:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV
        M GQ QS LMS DLN PFRFEGAHFKRWKQKMLFFLTLKKVAT CTTEKLKVSEKDP EEQLKNLATWTETDFI KNLILNGLTDELYDYYSTMTT KEV
Subjt:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV

Query:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE
        WDA QKKYDT+E  SKKYAV+ YLRYQ+T+D+SVE QSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLP LWKDFKNTLRHKTK FSLESLITRL+IE E
Subjt:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE

Query:  ARKHDKKE
             KK+
Subjt:  ARKHDKKE

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein

7.4e-112

100

Show/hide

Query:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV
        MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV
Subjt:  MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEV

Query:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE
        WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE
Subjt:  WDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEE

Query:  ARKHDKKEE
        ARKHDKKEE
Subjt:  ARKHDKKEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G00980.1 zinc knuckle (CCHC-type) family protein

6.6e-20

27.73

Show/hide

Query:  RFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLA-------TWTETDFICKNLILNGLTDELYDYYS-TMTTGKEVWDALQKKYDT
        RF+G  +  W  +M  FL   K+    +     +      E   + +         W   D++C   ++N L+D LY  YS      KE+WD L+  Y  
Subjt:  RFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLA-------TWTETDFICKNLILNGLTDELYDYYS-TMTTGKEVWDALQKKYDT

Query:  KEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKK---
         E++SK+  V +Y+ ++M +++ +  Q     KIA  I+S GM LD+ F V+ II K P  W+ F   L  + +   +  L+ R+K EEE  ++  K   
Subjt:  KEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKK---

Query:  --EEPKGNKMKRESN-------------KQNNPQSKSMVQIVCYNCNKPGYLARNC
               ++M+R  +             K+  P+    V IVC NC + G+LA++C
Subjt:  --EEPKGNKMKRESN-------------KQNNPQSKSMVQIVCYNCNKPGYLARNC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTCGGACAAATCCAATCCGACTTGATGTCTTCTGATCTCAACCGTCCATTCCGTTTTGAAGGAGCACATTTCAAAAGGTGGAAACAAAAAATGTTATTTTTCCTCAC
GCTGAAGAAGGTGGCCACTGCTTGTACTACTGAAAAGCTGAAGGTTTCAGAAAAAGATCCTATAGAAGAACAACTAAAGAACCTCGCCACCTGGACAGAAACTGACTTCA
TCTGTAAGAACCTAATTCTTAATGGTCTTACTGATGAACTATATGATTATTACAGTACCATGACTACTGGAAAAGAAGTGTGGGATGCGCTACAAAAGAAGTACGATACT
AAAGAAGCGAGGTCGAAGAAGTATGCTGTCAGCCGATACCTGAGATATCAAATGACTGATGACAAATCCGTGGAGACACAGTCACATGAAATCCAGAAAATAGCCCACGA
GATTATTAGTGAAGGTATGCCACTCGATGATCAATTTCAAGTTGCTGTTATTATTGATAAATTACCTCAACTGTGGAAGGATTTCAAGAACACCCTAAGGCACAAAACCA
AGGAGTTCTCACTGGAAAGTCTAATCACGAGGCTAAAGATAGAGGAGGAAGCAAGGAAGCATGATAAAAAAGAAGAGCCGAAAGGAAACAAGATGAAACGAGAATCCAAC
AAACAAAACAACCCACAGTCCAAAAGTATGGTACAAATTGTTTGTTATAACTGTAATAAGCCTGGTTATCTAGCTAGAAATTGTAGAAAAAGAGTCGTCCTGCTGCCACG
ACCTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVGQIQSDLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKLKVSEKDPIEEQLKNLATWTETDFICKNLILNGLTDELYDYYSTMTTGKEVWDALQKKYDT
KEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGMPLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIEEEARKHDKKEEPKGNKMKRESN
KQNNPQSKSMVQIVCYNCNKPGYLARNCRKRVVLLPRP

Pay0003237 (gene) of Melon (Payzawat) v1 genome