; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003286 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003286
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr03:4786007..4787968
RNA-Seq ExpressionPay0003286
SyntenyPay0003286
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR016197 - Chromo-like domain superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042458.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.4e-8561.79Show/hide
Query:  VFHP----LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSER----------TIQTLEDMFRDCVLQFK------VSIQVLEWHLLRHYMVDV
        + HP    + KT +    +VTFTLDKLAKLYVDKIV  Y AP +  S+R          ++Q   DM R C LQFK      +S+    ++   H  + +
Subjt:  VFHP----LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSER----------TIQTLEDMFRDCVLQFK------VSIQVLEWHLLRHYMVDV

Query:  VELQ---------------------LGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEI
           +                     +G ELVQ TSENVK IRE+LK A+DRQKSYADK +RDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFI  YEI
Subjt:  VELQ---------------------LGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEI

Query:  LECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARY
        LE IGP  YRLALPMELSRIHDVFHVS+L KYVPDPSHILEAQ V LKEN SY+EEPIQILDKKEQVLRNKV PLVKVLWRNHN EE+TWE EQAMK   
Subjt:  LECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARY

Query:  P
        P
Subjt:  P

KAA0054925.1 reverse transcriptase [Cucumis melo var. makuwa]2.5e-14178.71Show/hide
Query:  MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAP--------VAFMDLMNRVFHPLVKTAR
        MELRELKLQLQELVDGFI+PSASPWGALMLFVKKKD      + +  + K  + T      F  +  RL  AP        V F    +     LVKTAR
Subjt:  MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAP--------VAFMDLMNRVFHPLVKTAR

Query:  FLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQLGQELVQTTSENVKFIREKLKIAKDR
        FLPVKVTFTLDKLAKLYVDKIVRAY APTNGQSERTIQTLEDMFRDCVLQFK  +Q     L R          +GQELVQTTSENVKFIREKLKIAKD 
Subjt:  FLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQLGQELVQTTSENVKFIREKLKIAKDR

Query:  QKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENF
        QKSYADK +RDLEFEVGDKVFLKLSPWKGVLRFGRKGKL+PRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENF
Subjt:  QKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENF

Query:  SYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS
        SYKEEPIQILDKKEQ+LRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS
Subjt:  SYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS

KAA0056222.1 reverse transcriptase [Cucumis melo var. makuwa]7.9e-9565.89Show/hide
Query:  LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSER----------TIQTLEDMFRDCVLQFK------VSIQVLEWHLLRHYMVDVVELQ----
        L KTARFLPVKVTFTLDKLAKLYVDKIV AY AP +  S+R          ++Q   DM R C LQFK      +S+    ++   H  + +   +    
Subjt:  LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSER----------TIQTLEDMFRDCVLQFK------VSIQVLEWHLLRHYMVDVVELQ----

Query:  -----------------LGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPAT
                         +G ELVQ TSENVK IRE+LK A+DR+KSYADK +RDLEFEV DKVFLKLSPWKGVLRFG+KGKLSPRFIG YEILE IGP T
Subjt:  -----------------LGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPAT

Query:  YRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSS
        YRLALPMELSRI DVFHVS+L KYVPDP+HILEAQ VHLKEN SY+EEPIQILDKKEQV+RNK+ PLVKVLWRNHN EE+TWETEQAMKA+YP+LFTSS
Subjt:  YRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSS

KAA0056222.1 reverse transcriptase [Cucumis melo var. makuwa]6.9e-1482.35Show/hide
Query:  KDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFH
        + GYHQLKVKES I KT FRTRYG+YEFLV+PF LTNAP AFMDLMNRVFH
Subjt:  KDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFH

KAA0056222.1 reverse transcriptase [Cucumis melo var. makuwa]5.1e-9466.89Show/hide
Query:  LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEA------------------------------------PTNGQSERTIQTLEDMFRDCVLQFKVSIQVL
        L KT RFLPVKVTFTLDKLAKLYVDKIV AY A                                     T+GQSERTIQTLEDM R C           
Subjt:  LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEA------------------------------------PTNGQSERTIQTLEDMFRDCVLQFKVSIQVL

Query:  EWHLLRHYMVDVVELQL-GQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPAT
                  +V E +L G +LVQTTSENVKFIRE+LKI +DRQKSY DK +RDL+FEVGDKVFLKLSPWK VLRFGRKGKLSPRFI  Y+IL+ IG A 
Subjt:  EWHLLRHYMVDVVELQL-GQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPAT

Query:  YRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSS
        YR ALPMELSRIHDVFHVS+L KY+PDPSHILEA+ VHLKEN SY+EEPIQILDKKEQVLRNKV PLVKVLWRNHN EE TWETEQAMKARY HLFTSS
Subjt:  YRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSS

XP_008441648.2 PREDICTED: uncharacterized protein LOC103485729 [Cucumis melo]9.4e-18994.71Show/hide
Query:  MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLVKTARFLPVKVTF
        MELRELKLQLQELVDGFI+PSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFH LVKTARFLPVKVTF
Subjt:  MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLVKTARFLPVKVTF

Query:  TLDKLAKLYVDKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQ----------LGQELVQTTSENVKFIREKLKIAK
        TLDKLAKLYVDKIVRAY APTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQ          +GQELVQTTSENVKFIREKLKIAK
Subjt:  TLDKLAKLYVDKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQ----------LGQELVQTTSENVKFIREKLKIAK

Query:  DRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKE
        D QKSYADK +RDLEFEVGDKVFLKLSPWKGVLRFGRKGKL+PRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKE
Subjt:  DRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKE

Query:  NFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS
        NFSYKEEPIQILDKKEQ+LRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS
Subjt:  NFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS

TrEMBL top hitse value%identityAlignment
A0A1S3B3F6 uncharacterized protein LOC1034857294.6e-18994.71Show/hide
Query:  MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLVKTARFLPVKVTF
        MELRELKLQLQELVDGFI+PSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFH LVKTARFLPVKVTF
Subjt:  MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLVKTARFLPVKVTF

Query:  TLDKLAKLYVDKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQ----------LGQELVQTTSENVKFIREKLKIAK
        TLDKLAKLYVDKIVRAY APTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQ          +GQELVQTTSENVKFIREKLKIAK
Subjt:  TLDKLAKLYVDKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQ----------LGQELVQTTSENVKFIREKLKIAK

Query:  DRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKE
        D QKSYADK +RDLEFEVGDKVFLKLSPWKGVLRFGRKGKL+PRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKE
Subjt:  DRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKE

Query:  NFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS
        NFSYKEEPIQILDKKEQ+LRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS
Subjt:  NFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS

A0A5A7UK27 Reverse transcriptase3.8e-9565.89Show/hide
Query:  LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSER----------TIQTLEDMFRDCVLQFK------VSIQVLEWHLLRHYMVDVVELQ----
        L KTARFLPVKVTFTLDKLAKLYVDKIV AY AP +  S+R          ++Q   DM R C LQFK      +S+    ++   H  + +   +    
Subjt:  LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSER----------TIQTLEDMFRDCVLQFK------VSIQVLEWHLLRHYMVDVVELQ----

Query:  -----------------LGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPAT
                         +G ELVQ TSENVK IRE+LK A+DR+KSYADK +RDLEFEV DKVFLKLSPWKGVLRFG+KGKLSPRFIG YEILE IGP T
Subjt:  -----------------LGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPAT

Query:  YRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSS
        YRLALPMELSRI DVFHVS+L KYVPDP+HILEAQ VHLKEN SY+EEPIQILDKKEQV+RNK+ PLVKVLWRNHN EE+TWETEQAMKA+YP+LFTSS
Subjt:  YRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSS

A0A5A7UK27 Reverse transcriptase3.3e-1482.35Show/hide
Query:  KDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFH
        + GYHQLKVKES I KT FRTRYG+YEFLV+PF LTNAP AFMDLMNRVFH
Subjt:  KDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFH

A0A5A7UK27 Reverse transcriptase2.5e-9466.89Show/hide
Query:  LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEA------------------------------------PTNGQSERTIQTLEDMFRDCVLQFKVSIQVL
        L KT RFLPVKVTFTLDKLAKLYVDKIV AY A                                     T+GQSERTIQTLEDM R C           
Subjt:  LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEA------------------------------------PTNGQSERTIQTLEDMFRDCVLQFKVSIQVL

Query:  EWHLLRHYMVDVVELQL-GQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPAT
                  +V E +L G +LVQTTSENVKFIRE+LKI +DRQKSY DK +RDL+FEVGDKVFLKLSPWK VLRFGRKGKLSPRFI  Y+IL+ IG A 
Subjt:  EWHLLRHYMVDVVELQL-GQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPAT

Query:  YRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSS
        YR ALPMELSRIHDVFHVS+L KY+PDPSHILEA+ VHLKEN SY+EEPIQILDKKEQVLRNKV PLVKVLWRNHN EE TWETEQAMKARY HLFTSS
Subjt:  YRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSS

A0A5A7UMS3 Reverse transcriptase1.2e-14178.71Show/hide
Query:  MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAP--------VAFMDLMNRVFHPLVKTAR
        MELRELKLQLQELVDGFI+PSASPWGALMLFVKKKD      + +  + K  + T      F  +  RL  AP        V F    +     LVKTAR
Subjt:  MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAP--------VAFMDLMNRVFHPLVKTAR

Query:  FLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQLGQELVQTTSENVKFIREKLKIAKDR
        FLPVKVTFTLDKLAKLYVDKIVRAY APTNGQSERTIQTLEDMFRDCVLQFK  +Q     L R          +GQELVQTTSENVKFIREKLKIAKD 
Subjt:  FLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQLGQELVQTTSENVKFIREKLKIAKDR

Query:  QKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENF
        QKSYADK +RDLEFEVGDKVFLKLSPWKGVLRFGRKGKL+PRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENF
Subjt:  QKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENF

Query:  SYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS
        SYKEEPIQILDKKEQ+LRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS
Subjt:  SYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARYPHLFTSSS

A0A5D3DHF7 Putative DNA/RNA polymerases superfamily protein2.1e-8561.79Show/hide
Query:  VFHP----LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSER----------TIQTLEDMFRDCVLQFK------VSIQVLEWHLLRHYMVDV
        + HP    + KT +    +VTFTLDKLAKLYVDKIV  Y AP +  S+R          ++Q   DM R C LQFK      +S+    ++   H  + +
Subjt:  VFHP----LVKTARFLPVKVTFTLDKLAKLYVDKIVRAYEAPTNGQSER----------TIQTLEDMFRDCVLQFK------VSIQVLEWHLLRHYMVDV

Query:  VELQ---------------------LGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEI
           +                     +G ELVQ TSENVK IRE+LK A+DRQKSYADK +RDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFI  YEI
Subjt:  VELQ---------------------LGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIGLYEI

Query:  LECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARY
        LE IGP  YRLALPMELSRIHDVFHVS+L KYVPDPSHILEAQ V LKEN SY+EEPIQILDKKEQVLRNKV PLVKVLWRNHN EE+TWE EQAMK   
Subjt:  LECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEESTWETEQAMKARY

Query:  P
        P
Subjt:  P

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.2e-0746.15Show/hide
Query:  GYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLV
        G+HQ+++    + KTAF T++GHYE+L +PF L NAP  F   MN +  PL+
Subjt:  GYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLV

P20825 Retrovirus-related Pol polyprotein from transposon 2975.9e-0850Show/hide
Query:  GYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLV
        G+HQ+++ E  I KTAF T+ GHYE+L +PF L NAP  F   MN +  PL+
Subjt:  GYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLV

P31843 RNA-directed DNA polymerase homolog2.3e-0445.1Show/hide
Query:  KDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFH
        + GY Q+++ +    KT   TRYG +EF V+PF LTNA   F +LMN V +
Subjt:  KDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFH

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus2.7e-0551.06Show/hide
Query:  GYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRV
        G+HQ+ +KES I KTAF T  G YEFL +PF L NAP  F  +++ +
Subjt:  GYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAAGAGAACTAAAATTACAGTTGCAGGAATTGGTGGATGGCTTTATCCAACCTAGTGCATCTCCATGGGGTGCATTAATGTTGTTTGTTAAAAAGAAGGATGG
TTACCATCAGTTGAAAGTTAAAGAGTCATATATCTTGAAAACAGCTTTTCGAACGAGATATGGGCATTATGAATTCTTGGTGATCCCTTTTAGATTGACTAATGCCCCTG
TAGCCTTCATGGACTTGATGAATAGGGTGTTTCATCCACTTGTGAAGACAGCAAGATTTCTACCAGTCAAGGTCACTTTTACCTTGGATAAGCTGGCCAAATTGTACGTT
GATAAGATTGTGAGAGCGTATGAAGCTCCGACAAATGGCCAGTCAGAACGAACCATTCAGACCTTGGAGGATATGTTTAGAGATTGTGTTTTGCAGTTTAAGGTTTCCAT
TCAAGTATTGGAATGGCATCTTCTCAGGCATTATATGGTAGACGTTGTAGAACTTCAGTTGGGGCAAGAATTAGTACAAACCACTTCTGAGAATGTGAAATTTATTAGAG
AAAAGTTGAAAATAGCTAAGGATCGTCAAAAGAGTTATGCAGATAAGTGCCAAAGAGACTTGGAATTTGAGGTTGGTGACAAGGTCTTTCTAAAGTTATCTCCTTGGAAA
GGTGTGCTTCGTTTTGGCAGAAAAGGAAAGCTAAGTCCAAGATTTATTGGGCTTTATGAGATACTAGAATGTATTGGGCCTGCAACATATCGTTTGGCGTTGCCTATGGA
ACTTTCTAGGATTCATGATGTGTTTCATGTGTCAATATTGCATAAGTACGTTCCAGATCCGTCTCATATTCTTGAAGCACAATCAGTTCATTTGAAAGAGAACTTTTCCT
ACAAAGAGGAACCAATACAAATTCTTGACAAGAAAGAACAAGTGCTAAGAAACAAAGTCGAACCATTAGTCAAGGTTCTTTGGAGGAACCATAATATTGAAGAATCAACG
TGGGAGACGGAGCAGGCAATGAAGGCGCGATACCCACATCTTTTCACATCATCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAAGAGAACTAAAATTACAGTTGCAGGAATTGGTGGATGGCTTTATCCAACCTAGTGCATCTCCATGGGGTGCATTAATGTTGTTTGTTAAAAAGAAGGATGG
TTACCATCAGTTGAAAGTTAAAGAGTCATATATCTTGAAAACAGCTTTTCGAACGAGATATGGGCATTATGAATTCTTGGTGATCCCTTTTAGATTGACTAATGCCCCTG
TAGCCTTCATGGACTTGATGAATAGGGTGTTTCATCCACTTGTGAAGACAGCAAGATTTCTACCAGTCAAGGTCACTTTTACCTTGGATAAGCTGGCCAAATTGTACGTT
GATAAGATTGTGAGAGCGTATGAAGCTCCGACAAATGGCCAGTCAGAACGAACCATTCAGACCTTGGAGGATATGTTTAGAGATTGTGTTTTGCAGTTTAAGGTTTCCAT
TCAAGTATTGGAATGGCATCTTCTCAGGCATTATATGGTAGACGTTGTAGAACTTCAGTTGGGGCAAGAATTAGTACAAACCACTTCTGAGAATGTGAAATTTATTAGAG
AAAAGTTGAAAATAGCTAAGGATCGTCAAAAGAGTTATGCAGATAAGTGCCAAAGAGACTTGGAATTTGAGGTTGGTGACAAGGTCTTTCTAAAGTTATCTCCTTGGAAA
GGTGTGCTTCGTTTTGGCAGAAAAGGAAAGCTAAGTCCAAGATTTATTGGGCTTTATGAGATACTAGAATGTATTGGGCCTGCAACATATCGTTTGGCGTTGCCTATGGA
ACTTTCTAGGATTCATGATGTGTTTCATGTGTCAATATTGCATAAGTACGTTCCAGATCCGTCTCATATTCTTGAAGCACAATCAGTTCATTTGAAAGAGAACTTTTCCT
ACAAAGAGGAACCAATACAAATTCTTGACAAGAAAGAACAAGTGCTAAGAAACAAAGTCGAACCATTAGTCAAGGTTCTTTGGAGGAACCATAATATTGAAGAATCAACG
TGGGAGACGGAGCAGGCAATGAAGGCGCGATACCCACATCTTTTCACATCATCATCTTGA
Protein sequenceShow/hide protein sequence
MELRELKLQLQELVDGFIQPSASPWGALMLFVKKKDGYHQLKVKESYILKTAFRTRYGHYEFLVIPFRLTNAPVAFMDLMNRVFHPLVKTARFLPVKVTFTLDKLAKLYV
DKIVRAYEAPTNGQSERTIQTLEDMFRDCVLQFKVSIQVLEWHLLRHYMVDVVELQLGQELVQTTSENVKFIREKLKIAKDRQKSYADKCQRDLEFEVGDKVFLKLSPWK
GVLRFGRKGKLSPRFIGLYEILECIGPATYRLALPMELSRIHDVFHVSILHKYVPDPSHILEAQSVHLKENFSYKEEPIQILDKKEQVLRNKVEPLVKVLWRNHNIEEST
WETEQAMKARYPHLFTSSS