; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003322 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003322
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr06:27314733..27316485
RNA-Seq ExpressionPay0003322
SyntenyPay0003322
Gene Ontology termsGO:0009635 - response to herbicide (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009769 - photosynthesis, light harvesting in photosystem II (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009517 - PSII associated light-harvesting complex II (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.2e-14996.97Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS  LLRATPFLGQTR SPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_004149296.1 chlorophyll a-b binding protein 13, chloroplastic [Cucumis sativus]3.2e-14996.59Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TA +ATLLRATPFLGQ R SPQNPLRD VAMGTGKYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_008452292.1 PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo]3.3e-154100Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022929511.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata]3.2e-14996.97Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS  LLRATPFLGQTR SPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022985252.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima]7.2e-14996.59Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TAT+  LLRATPFLGQTR SPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

TrEMBL top hitse value%identityAlignment
A0A0A0L6I8 Chlorophyll a-b binding protein, chloroplastic1.6e-14996.59Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TA +ATLLRATPFLGQ R SPQNPLRD VAMGTGKYTM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAG+QIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A1S3BUM8 Chlorophyll a-b binding protein, chloroplastic1.6e-154100Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A5A7TY25 Chlorophyll a-b binding protein, chloroplastic1.6e-154100Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1ENC1 Chlorophyll a-b binding protein, chloroplastic1.6e-14996.97Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS  LLRATPFLGQTR SPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1J4D4 Chlorophyll a-b binding protein, chloroplastic3.5e-14996.59Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TAT+  LLRATPFLGQTR SPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVLEKWLKVDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

SwissProt top hitse value%identityAlignment
P12328 Chlorophyll a-b binding protein of LHCII type I, chloroplastic2.9e-10069.06Show/hide
Query:  SATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        +A+ ++++ F GQT    ++ L   V +  G+++M          +WYG DR K+LGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH 
Subjt:  SATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGL
        RWAMLGALGCI PE+L K   V F E VWFKAGAQIF+EGGLDYLGNPNLVHAQSILA+   QVVLMGL+EG+R+ G   +GEG D LYPGG  FDPLGL
Subjt:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGL

Query:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        ADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW +AT F PG
Subjt:  ADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P14278 Chlorophyll a-b binding protein 4, chloroplastic4.9e-10069.85Show/hide
Query:  LRATPFLGQTRGSPQNP-LRDFVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
        ++ + F+GQ  G  QN  +R     G G+ TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Subjt:  LRATPFLGQTRGSPQNP-LRDFVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA

Query:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD
        MLGALGC+ PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FDPLGLADD
Subjt:  MLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        P  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+++PVANNAW YAT F PG
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P27489 Chlorophyll a-b binding protein 13, chloroplastic1.4e-14290.15Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TA+S T+++ATPFLGQT+ +  NPLRD VAMG+ ++TM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGALGCI PEVLEKW+KVDFKEPVWFKAG+QIF++GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF PG+
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic9.5e-13686.19Show/hide
Query:  MAST---ATSATLLRATPFL-GQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        MAST   A S  ++  TPFL GQ R +  +PLRD  A   G+ TMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEV
Subjt:  MAST---ATSATLLRATPFL-GQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
        IHGRWAMLGALGC+ PEVL+KW+ V+FKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
Subjt:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL

Query:  GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLD+PVANNAWV+ATKFAPGS
Subjt:  GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Q9S7M0 Chlorophyll a-b binding protein 3, chloroplastic5.7e-14189.06Show/hide
Query:  MASTAT-SATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MAST T S+++L  T FLGQT+ S  NPLRD V++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MASTAT-SATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL+KW++VDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Arabidopsis top hitse value%identityAlignment
AT1G29930.1 chlorophyll A/B binding protein 11.2e-9665.53Show/hide
Query:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        ++S A +   ++ +P   +  GS +  +R  VA   G        WYG DRVKYLGPFS ++PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH R
Subjt:  MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLA
        WAMLGALGC+ PE+L +   V F E VWFKAG+QIF++GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G   +GE  D LYPGG  FDPLGLA
Subjt:  WAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
         DP  FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW +AT F PG
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05070.1 photosystem II light harvesting complex gene 2.21.5e-9968.66Show/hide
Query:  ATSATLLRATPFLGQTRGSPQNPLRDFV-AMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        ATSA  ++ + F GQT   P + L   V  +G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEV
Subjt:  ATSATLLRATPFLGQTRGSPQNPLRDFV-AMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP
        IH RWAMLGALGC  PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDP
Subjt:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP

Query:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        L LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG
Subjt:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05100.1 photosystem II light harvesting complex gene 2.13.9e-10068.77Show/hide
Query:  ATSATLLRATPFLGQTRGSPQNP-LRDFVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        ATSA  ++ + F GQT   P N  LR     G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEV
Subjt:  ATSATLLRATPFLGQTRGSPQNP-LRDFVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP
        IH RWAMLGALGC  PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDP
Subjt:  IHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP

Query:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        L LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG+
Subjt:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

AT3G27690.1 photosystem II light harvesting complex gene 2.31.6e-9867.66Show/hide
Query:  ATSATLLRATPFLGQTRGSPQNPL--RDFVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALE
        ATSA  ++ + F GQT   P N L  +   + G G+  M          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LE
Subjt:  ATSATLLRATPFLGQTRGSPQNPL--RDFVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALE

Query:  VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFD
        VIH RWAMLGALGC  PE+L K   V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FD
Subjt:  VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFD

Query:  PLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        PL LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  PLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT5G54270.1 light-harvesting chlorophyll B-binding protein 34.1e-14289.06Show/hide
Query:  MASTAT-SATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MAST T S+++L  T FLGQT+ S  NPLRD V++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MASTAT-SATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGA GCITPEVL+KW++VDFKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCACCGCCACCTCCGCCACCCTCCTCCGGGCCACCCCTTTTCTCGGCCAGACCAGAGGCTCTCCTCAAAACCCCCTCAGAGATTTCGTCGCCATGGGAACTGG
AAAATACACCATGGGAAATGATTTGTGGTATGGACCCGACAGAGTTAAGTACTTGGGGCCGTTTTCAGCCCAGACTCCATCGTACTTGAACGGTGAGTTCCCTGGTGATT
ATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCTAAAAACCGAGCTCTTGAGGTAATCCACGGGAGGTGGGCGATGTTGGGTGCATTGGGTTGCATA
ACACCCGAAGTCTTAGAAAAGTGGCTTAAAGTGGACTTCAAGGAGCCAGTATGGTTCAAGGCAGGAGCCCAAATCTTCACAGAAGGAGGTCTAGACTACCTAGGCAACCC
CAACTTGGTCCACGCCCAAAGCATTCTAGCCGTGTTGGGGTTCCAAGTCGTCCTCATGGGTCTAGTAGAAGGGTTCCGCATCAACGGTCTCGATGGCGTCGGCGAGGGCA
ACGACCTCTACCCAGGCGGTCAATACTTTGACCCACTCGGACTGGCTGATGACCCTGTCACCTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAATGGACGTCTTGCCATG
TTTTCTATGTTTGGATTCTTCGTTCAAGCGATTGTGACAGGAAAGGGTCCTCTTGAGAACCTTCTTGACCACCTTGATAACCCAGTGGCTAACAATGCTTGGGTTTATGC
CACCAAGTTTGCCCCTGGCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATAAAATGTGGATAGAAAGAGATGAGTTGTAGATGCAAAAAAATCTTTAGAAACAATATGATTGGCTAACTAAGCCCTCTCATTACCCCACAAAATTTCTCATATCTTTC
ACTCTTCACCACTCATCTCCTCGTTTCCTCATAATATTCCCCCACTTCCACTCTCTCTCACACAATCTCCAACACTACTGCCCATTCCTCTGTTCTTTCTCTCTACTCTC
AACCACAGAGCTTCAAGTACCCATGGCCTCCACCGCCACCTCCGCCACCCTCCTCCGGGCCACCCCTTTTCTCGGCCAGACCAGAGGCTCTCCTCAAAACCCCCTCAGAG
ATTTCGTCGCCATGGGAACTGGAAAATACACCATGGGAAATGATTTGTGGTATGGACCCGACAGAGTTAAGTACTTGGGGCCGTTTTCAGCCCAGACTCCATCGTACTTG
AACGGTGAGTTCCCTGGTGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCTAAAAACCGAGCTCTTGAGGTAATCCACGGGAGGTGGGCGAT
GTTGGGTGCATTGGGTTGCATAACACCCGAAGTCTTAGAAAAGTGGCTTAAAGTGGACTTCAAGGAGCCAGTATGGTTCAAGGCAGGAGCCCAAATCTTCACAGAAGGAG
GTCTAGACTACCTAGGCAACCCCAACTTGGTCCACGCCCAAAGCATTCTAGCCGTGTTGGGGTTCCAAGTCGTCCTCATGGGTCTAGTAGAAGGGTTCCGCATCAACGGT
CTCGATGGCGTCGGCGAGGGCAACGACCTCTACCCAGGCGGTCAATACTTTGACCCACTCGGACTGGCTGATGACCCTGTCACCTTCGCGGAGCTCAAGGTGAAGGAGAT
CAAGAATGGACGTCTTGCCATGTTTTCTATGTTTGGATTCTTCGTTCAAGCGATTGTGACAGGAAAGGGTCCTCTTGAGAACCTTCTTGACCACCTTGATAACCCAGTGG
CTAACAATGCTTGGGTTTATGCCACCAAGTTTGCCCCTGGCTCATAAGTATATCACGGTAATTACTGAAATTGAACAAGTTTGTTTGCTTGTTGTGTAAATTGTTTGTAG
TTCTCTGGGTGTTCTTTTTGGTGTGGATGGATGTGATTATAATTAGATGGCTGAGTATTAAAGTGGATCAATGGAAATCAATTCTCACTTGATCAAATGACTTCAATGTT
CTTCATCATTTAATTAAAGGTAATCTTGATTGTACTGATTTGATAATTTACATTCTGGTAGTAACTTAACAAGGA
Protein sequenceShow/hide protein sequence
MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCI
TPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAM
FSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS