; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003331 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003331
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr10:16999718..17000847
RNA-Seq ExpressionPay0003331
SyntenyPay0003331
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]6.8e-13377.33Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRDNLAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-13277.02Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH+ELLKKPQPVPNECTDQRWRWFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRDNLAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

KAA0048361.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-13277.02Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRW+WFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRDNLAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-13176.4Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHIL HDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHS ARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATT ADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRDNLAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

KAA0065893.1 retrotransposon protein [Cucumis melo var. makuwa]3.2e-13076.09Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFL+ILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQC TILACCLLHNLINREMTNFDIEDNIDEVDSTHATT ADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRD+LAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7TXW1 Retrotransposon protein7.4e-13377.02Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH+ELLKKPQPVPNECTDQRWRWFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRDNLAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

A0A5A7U476 Retrotransposon protein7.4e-13377.02Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRW+WFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRDNLAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

A0A5A7U9H2 Retrotransposon protein1.4e-13176.4Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHIL HDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHS ARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATT ADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRDNLAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

A0A5A7VCK9 Retrotransposon protein1.5e-13076.09Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFL+ILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQC TILACCLLHNLINREMTNFDIEDNIDEVDSTHATT ADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRD+LAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

A0A5D3BDX0 Retrotransposon protein3.3e-13377.33Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLG

Query:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------
        ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF                                                            
Subjt:  ALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDF------------------------------------------------------------

Query:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
                     FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
Subjt:  -------------FFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEMFTEWELRNQ
        EWSQWRDNLAEEMFTEWELRNQ
Subjt:  EWSQWRDNLAEEMFTEWELRNQ

SwissProt top hitse value%identityAlignment
Q17QR8 Putative nuclease HARBI17.4e-0537.5Show/hide
Query:  LGVCDTKGDFFFNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL
        L + +T  ++ +NM HS+  +VIE+ F  L  R+  L   +G   Y  E     ILACC+LHN+
Subjt:  LGVCDTKGDFFFNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL

Q96MB7 Putative nuclease HARBI17.4e-0537.5Show/hide
Query:  LGVCDTKGDFFFNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL
        L + +T  ++ +NM HS+  +VIE+ F  L  R+  L   +G   Y  E     ILACC+LHN+
Subjt:  LGVCDTKGDFFFNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL

Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein5.6e-1634.03Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKP-----QPVPNEC-TDQR-WR
        M   CF  LC++L+T   L  T  + +EE VAMFL I  H+   R +   F R+ ET+ R F  VL A   L  + ++ P       +P     DQR W 
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKP-----QPVPNEC-TDQR-WR

Query:  WFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTK
        +F   +GA+DGT++ V V    +  Y  R    + N++ +CD K
Subjt:  WFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTK

AT5G12010.1 unknown protein1.5e-0533.82Show/hide
Query:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVD
        FN K S  + V + AFG LKGRWA L+ ++   ++     + ACC+LHN+        + E  ++ +D
Subjt:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVD

AT5G28730.1 unknown protein2.3e-0625.19Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLK-----KPQPVPNECTD--QRWR
        M    F  LC +L    GL S+  + ++E VA+FL I A +   R I   F  + ETI R F+ VL A+ RL  E ++     + + + N   D  + W 
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLK-----KPQPVPNECTD--QRWR

Query:  WFENCLGA----------LD--GTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRT
        +  + LG           LD   TY  V +  S      T    V +  +       D  F++   S   +++  +   +G  A  R +     ++    
Subjt:  WFENCLGA----------LD--GTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRT

Query:  ILACCLL--HNLINREMTNFDIEDNIDEVDSTHATTAADDIH---YIETSNEWSQW----RDNLAEEMFT
         L   L   HN+ + +  N D E+N+  V + H  T   D +    IE S+E   +    RD +AE +++
Subjt:  ILACCLL--HNLINREMTNFDIEDNIDEVDSTHATTAADDIH---YIETSNEWSQW----RDNLAEEMFT

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.9e-0827.83Show/hide
Query:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIE---------DNIDEVDSTHATTAADDIHYIETSNE----
        FN++H S RNVIER FG+ K R+AI +    +  + Q   +L C  LHN + +E  + + +         D ++   +   T   D+   +E   +    
Subjt:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIE---------DNIDEVDSTHATTAADDIHYIETSNE----

Query:  WSQWRDNLAEEMFTE
         + WR ++AE+M+ +
Subjt:  WSQWRDNLAEEMFTE

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.3e-2227.69Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECT-DQRWRWFENCL
        MD+  F  LC LL+T   L  T  + +E  +A+FL I+ H+++ R +Q  F  SGETISRHFN VL AVI + ++     QP  N  T +    +F++C+
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECT-DQRWRWFENCL

Query:  GALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCD----------------------------------TKGDFF------------------------
        G +D  +I V V   ++  +R   G +  NVL                                       +G ++                        
Subjt:  GALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCD----------------------------------TKGDFF------------------------

Query:  ------FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINRE
              FN +H      I R FG LK R+ IL     YP++ Q + ++A C LHN +  E
Subjt:  ------FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGAAGATGTTTCGCCATTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACAT
TCTTGCGCACGATGTGAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCTGTCATTCGACTTCATG
AGGAGCTGTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGAATTGCCTAGGTGCATTAGATGGCACGTACATAAAAGTCAAC
GTTCCAGCAAGTGACCGGGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACACGAAAGGAGATTTTTTCTTCAATATGAAACATTC
TTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATGGGCGATACTGCGGGGAAAGTCATACTATCCTGTAGAAGTTCAATGTCGCACAATACTCG
CATGTTGTCTCCTCCACAACCTTATCAATAGGGAGATGACGAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACCCACGCGACTACTGCCGCGGATGACATA
CATTACATAGAGACGTCGAATGAGTGGAGTCAATGGAGGGACAACCTTGCAGAAGAAATGTTTACTGAATGGGAGTTGCGTAACCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCGAAGATGTTTCGCCATTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACAT
TCTTGCGCACGATGTGAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCTGTCATTCGACTTCATG
AGGAGCTGTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGAATTGCCTAGGTGCATTAGATGGCACGTACATAAAAGTCAAC
GTTCCAGCAAGTGACCGGGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACACGAAAGGAGATTTTTTCTTCAATATGAAACATTC
TTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATGGGCGATACTGCGGGGAAAGTCATACTATCCTGTAGAAGTTCAATGTCGCACAATACTCG
CATGTTGTCTCCTCCACAACCTTATCAATAGGGAGATGACGAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACCCACGCGACTACTGCCGCGGATGACATA
CATTACATAGAGACGTCGAATGAGTGGAGTCAATGGAGGGACAACCTTGCAGAAGAAATGTTTACTGAATGGGAGTTGCGTAACCAATAG
Protein sequenceShow/hide protein sequence
MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVN
VPASDRARYRTRKGEVATNVLGVCDTKGDFFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDI
HYIETSNEWSQWRDNLAEEMFTEWELRNQ