; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003335 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003335
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Genome locationchr09:14521659..14523033
RNA-Seq ExpressionPay0003335
SyntenyPay0003335
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031752.1 uncharacterized protein E6C27_scaffold506G00150 [Cucumis melo var. makuwa]1.6e-23091.97Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA                THIIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLEREIPSLRMAIQEGLTTEDNARLRL+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.6e-23091.97Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA                THIIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLEREIPSLRMAIQEGLTTEDNARLRL+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

KAA0053465.1 uncharacterized protein E6C27_scaffold190G00130 [Cucumis melo var. makuwa]4.5e-22589.91Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQY VKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLAT LTVSEDIPINI LCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVY IDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEES KALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAK+CEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLV PITPKSTAGHSYILAGTDYFSKWAEA                THIIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQ+KSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLEREIPSLRMAIQ+GLTTEDNARLRL+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

TYK02262.1 uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]1.7e-22489.45Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAK+CEACQFHANFIHQPPEPLHPTIASWPFE WGLDLVGPITPKS+AGHSYILA TDYFS+WAEA                T+IIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQ+KSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLE+EIPSLRM+IQEGLTT+DNARL L+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.6e-23091.97Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA                THIIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLEREIPSLRMAIQEGLTTEDNARLRL+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

TrEMBL top hitse value%identityAlignment
A0A5A7SKZ3 Ribonuclease H7.8e-23191.97Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA                THIIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLEREIPSLRMAIQEGLTTEDNARLRL+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

A0A5A7TZU9 Ribonuclease H7.8e-23191.97Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA                THIIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLEREIPSLRMAIQEGLTTEDNARLRL+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

A0A5A7UID6 Ribonuclease H2.2e-22589.91Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQY VKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLAT LTVSEDIPINI LCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVY IDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEES KALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAK+CEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLV PITPKSTAGHSYILAGTDYFSKWAEA                THIIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQ+KSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLEREIPSLRMAIQ+GLTTEDNARLRL+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

A0A5D3BTY1 Ribonuclease H8.3e-22589.45Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAK+CEACQFHANFIHQPPEPLHPTIASWPFE WGLDLVGPITPKS+AGHSYILA TDYFS+WAEA                T+IIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQ+KSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLE+EIPSLRM+IQEGLTT+DNARL L+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

A0A5D3D1E5 Ribonuclease H7.8e-23191.97Show/hide
Query:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
        MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE
Subjt:  MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYE

Query:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY
        EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ           MGY
Subjt:  EADVISVYAIDEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQ-----------MGY

Query:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY
        YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA                THIIYRY
Subjt:  YWPTMIHDSMHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA----------------THIIYRY

Query:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
        GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL
Subjt:  GIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVL

Query:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR
        PLEREIPSLRMAIQEGLTTEDNARLRL+  + L ++
Subjt:  PLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKR

SwissProt top hitse value%identityAlignment
A4FUB7 Gypsy retrotransposon integrase-like protein 17.7e-1825.82Show/hide
Query:  TDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAH----------QMGYYWPTMIHDSMHFAKHCEACQFHANFIHQPP
        T P  R+ IRR A +F++                    +E  K L E H    GAH          +  YYW ++ +D   +   C+ CQ   N +   P
Subjt:  TDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAH----------QMGYYWPTMIHDSMHFAKHCEACQFHANFIHQPP

Query:  EPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWA---------------EATHIIYRYGIPHRIVTDNGRQFANTLMDKLCEKFNFKQF
        +  H      P+    +DL+GP    S   H Y +  TD F+KW                   +I + YG P +I+ D   +F + +  +LCE F  KQ 
Subjt:  EPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWA---------------EATHIIYRYGIPHRIVTDNGRQFANTLMDKLCEKFNFKQF

Query:  KSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVLPLEREI
          S  +   N  AE+   T+ + L K       DW + +    +A+  TH  PT  TPY  ++     +P   +I
Subjt:  KSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVLPLEREI

P03360 Gag-Pol polyprotein (Fragment)4.8e-1230.57Show/hide
Query:  PFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA------------THIIY----RYGIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAA
        P E W +D    IT K   G+ Y+L   D FS W EA             H+I+    R+G+P +I +DNG  F   +  +LCE  N        Y   +
Subjt:  PFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEA------------THIIY----RYGIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAA

Query:  NGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVE
        +G  E  N+TL   + K+  +T  DW   + +AL   R T     G++P+ ++YG++
Subjt:  NGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVE

P9WLH4 Uncharacterized protein MT22879.8e-0538.24Show/hide
Query:  ASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALAN
        A + G     +  DSKL++ Q+S +++VKH DL   +  A+ L  +F  I  E +PR+ N  AD LAN
Subjt:  ASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALAN

P9WLH5 Bifunctional protein Rv2228c9.8e-0538.24Show/hide
Query:  ASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALAN
        A + G     +  DSKL++ Q+S +++VKH DL   +  A+ L  +F  I  E +PR+ N  AD LAN
Subjt:  ASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALAN

Q9HSF6 Ribonuclease HI8.0e-0741.43Show/hide
Query:  ASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLA
        A++FG   IE+ GDS+L+  QL+  ++    DL+     AR L+  FD   + H+PR+ N++ADALAN A
Subjt:  ASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGAATTTGGGATAAAGTGCATAGAAATATTCGGCGATTCGAAGTTAATCATAAATCAGCTCTCTTATCAGTATGAGGTAAAGCATCAAGACTTGAAGCCTTA
CTTTAGTTATGCTAGAAGATTGATGGACAGATTCGACAGCATAATATTGGAGCATATACCGAGATCAGAAAACAAGAAAGCTGATGCACTTGCAAATCTGGCCACTGCTT
TAACAGTCTCGGAAGATATACCAATAAACATTTCCCTTTGCCAAAAATGGATTGTGCCGTCAATTGAAAGTCAATACGAAGAAGCTGATGTGATATCTGTATATGCAATT
GATGAAGAAGATTGGCGCCAACCCATTATAGACTATTTGGAGCATGGAAAACTTCCCACCGATCCTCGACATAGAGCTGAAATACGTAGAAGAGCTGCGCGATTTATTTA
TTACAAAGACACACTTTACAGACGCTCATATGAGGGACTTCTACTGCGATGCCTAGGAAAAGAGGAATCGACAAAGGCCTTAGAGGAAGCTCATTCAGGTATTTGTGGTG
CCCACCAAATGGGTTACTATTGGCCTACCATGATCCACGATTCGATGCATTTTGCGAAGCATTGTGAGGCTTGTCAATTCCATGCAAATTTTATACATCAGCCACCAGAA
CCGCTCCATCCAACAATAGCTTCATGGCCTTTTGAAGCTTGGGGACTCGACCTGGTTGGACCTATCACGCCTAAATCAACGGCTGGTCATTCTTACATCCTTGCAGGAAC
TGATTATTTTTCTAAATGGGCTGAAGCCACACACATCATTTACAGATATGGTATTCCTCATCGCATCGTAACTGATAATGGAAGACAATTCGCTAACACTTTGATGGACA
AGCTATGCGAAAAATTTAACTTCAAACAGTTCAAGTCTTCTATGTACAATGCTGCAGCAAATGGATTGGCAGAAGCATTCAACAAAACTTTGTGCAGTCTGCTTAAAAAG
GTGGTCTCTAAGACAAAAAGAGATTGGCAAGAAAAGATTGGGGAAGCATTGTGGGCCTACAGAACTACCCATCGTACTCCTACGGGTGTTACACCCTATTCCTTAGTTTA
TGGCGTTGAAGCAGTACTCCCACTAGAAAGAGAAATTCCTTCCTTAAGAATGGCTATTCAAGAAGGGCTAACTACTGAAGACAATGCTAGATTACGCTTGAAGAGTTGGA
AGCACTTGACGAAAAGAGACTGGAAGCTCAACAAGCACTCGAATGTTATCAAGCACGAATGTCAAAAGCCTTTGACAAACAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAGAATTTGGGATAAAGTGCATAGAAATATTCGGCGATTCGAAGTTAATCATAAATCAGCTCTCTTATCAGTATGAGGTAAAGCATCAAGACTTGAAGCCTTA
CTTTAGTTATGCTAGAAGATTGATGGACAGATTCGACAGCATAATATTGGAGCATATACCGAGATCAGAAAACAAGAAAGCTGATGCACTTGCAAATCTGGCCACTGCTT
TAACAGTCTCGGAAGATATACCAATAAACATTTCCCTTTGCCAAAAATGGATTGTGCCGTCAATTGAAAGTCAATACGAAGAAGCTGATGTGATATCTGTATATGCAATT
GATGAAGAAGATTGGCGCCAACCCATTATAGACTATTTGGAGCATGGAAAACTTCCCACCGATCCTCGACATAGAGCTGAAATACGTAGAAGAGCTGCGCGATTTATTTA
TTACAAAGACACACTTTACAGACGCTCATATGAGGGACTTCTACTGCGATGCCTAGGAAAAGAGGAATCGACAAAGGCCTTAGAGGAAGCTCATTCAGGTATTTGTGGTG
CCCACCAAATGGGTTACTATTGGCCTACCATGATCCACGATTCGATGCATTTTGCGAAGCATTGTGAGGCTTGTCAATTCCATGCAAATTTTATACATCAGCCACCAGAA
CCGCTCCATCCAACAATAGCTTCATGGCCTTTTGAAGCTTGGGGACTCGACCTGGTTGGACCTATCACGCCTAAATCAACGGCTGGTCATTCTTACATCCTTGCAGGAAC
TGATTATTTTTCTAAATGGGCTGAAGCCACACACATCATTTACAGATATGGTATTCCTCATCGCATCGTAACTGATAATGGAAGACAATTCGCTAACACTTTGATGGACA
AGCTATGCGAAAAATTTAACTTCAAACAGTTCAAGTCTTCTATGTACAATGCTGCAGCAAATGGATTGGCAGAAGCATTCAACAAAACTTTGTGCAGTCTGCTTAAAAAG
GTGGTCTCTAAGACAAAAAGAGATTGGCAAGAAAAGATTGGGGAAGCATTGTGGGCCTACAGAACTACCCATCGTACTCCTACGGGTGTTACACCCTATTCCTTAGTTTA
TGGCGTTGAAGCAGTACTCCCACTAGAAAGAGAAATTCCTTCCTTAAGAATGGCTATTCAAGAAGGGCTAACTACTGAAGACAATGCTAGATTACGCTTGAAGAGTTGGA
AGCACTTGACGAAAAGAGACTGGAAGCTCAACAAGCACTCGAATGTTATCAAGCACGAATGTCAAAAGCCTTTGACAAACAGGTAA
Protein sequenceShow/hide protein sequence
MASEFGIKCIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAI
DEEDWRQPIIDYLEHGKLPTDPRHRAEIRRRAARFIYYKDTLYRRSYEGLLLRCLGKEESTKALEEAHSGICGAHQMGYYWPTMIHDSMHFAKHCEACQFHANFIHQPPE
PLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTDYFSKWAEATHIIYRYGIPHRIVTDNGRQFANTLMDKLCEKFNFKQFKSSMYNAAANGLAEAFNKTLCSLLKK
VVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVYGVEAVLPLEREIPSLRMAIQEGLTTEDNARLRLKSWKHLTKRDWKLNKHSNVIKHECQKPLTNR