; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003358 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003358
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationchr05:6705588..6712929
RNA-Seq ExpressionPay0003358
SyntenyPay0003358
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0032544 - plastid translation (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140097.1 ribosome-recycling factor, chloroplastic isoform X1 [Cucumis sativus]1.9e-13695.68Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNRR VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_008449432.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X1 [Cucumis melo]2.8e-143100Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
        MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_008449433.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X2 [Cucumis melo]2.6e-14199.64Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
        MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKN RGVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_011657524.1 ribosome-recycling factor, chloroplastic isoform X2 [Cucumis sativus]1.1e-13495.32Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNR  VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_038888223.1 ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida]4.8e-13593.95Show/hide
Query:  MATPFSATTSIRRSLF---HNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTL
        MATPFS+TTS+RRS+F    NPPPK LLSLRDYN GLNCVKCGSS+ HLCSWKSASNYVRL+++AL+LSTQLSVSGN+LKNRRGVVRAATIEEIEAEKTL
Subjt:  MATPFSATTSIRRSLF---HNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTL

Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ
        IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

TrEMBL top hitse value%identityAlignment
A0A0A0KJG4 Ribosome-recycling factor, chloroplastic9.4e-13795.68Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
        MATPFSAT SIRRSLF NPPPK LLSLRDYNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNRR VVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A1S3BMN4 Ribosome-recycling factor, chloroplastic1.4e-143100Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
        MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A1S3BMY6 Ribosome-recycling factor, chloroplastic1.3e-14199.64Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK
        MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKN RGVVRAATIEEIEAEKTLIEK
Subjt:  MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEK

Query:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
        DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS
Subjt:  DVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTS

Query:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A6J1DZ32 Ribosome-recycling factor, chloroplastic2.1e-12086.83Show/hide
Query:  MATPFSATTSIRRSLF---HNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTL
        MATPFS T S+ RS+F   HN   + LLSLRDYNGGLNCVKCG ++AH+ SW SA+NYVRL + AL++S+ + VSG++LKNRRGVV+AATIEEIEAEKTL
Subjt:  MATPFSATTSIRRSLF---HNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTL

Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ
        IEKDV++RMEKTIDTVRSNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A6J1ESI6 Ribosome-recycling factor, chloroplastic9.4e-12185.05Show/hide
Query:  MATPFSATTSIRRSLFHN---PPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTL
        MATPFS+TTS+ RS+F     PPPK LLS+RDYN GLNC+KCGS++  L SWKSASNY+R+ + AL+L TQ   SGN+ K RRGV+RAATIEEIEAEK L
Subjt:  MATPFSATTSIRRSLFHN---PPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTL

Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ
        IEKDV+ARMEKTIDTVRS+FNSIRTGR+NPAMLDKIEVEYYGSPV LKSIAQISTPDASSLL+QPYDKSSLKSIEKAIVNS+LG+TPNNDGEVIRLTLPQ
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY+KLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

SwissProt top hitse value%identityAlignment
A2YMU2 Ribosome-recycling factor, chloroplastic2.8e-7767.11Show/hide
Query:  SASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        S++N++ L    +   ++  +  N   ++R V+R ATIEEIEAEK++IE   + RMEK I+TV++NFN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  SASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDVLYKQKEKELLKV
        +DLQK+TD+YMKKI+ + KQKE+EL+K+
Subjt:  SDLQKLTDDYMKKIDVLYKQKEKELLKV

A3BLC3 Ribosome-recycling factor, chloroplastic2.8e-7767.11Show/hide
Query:  SASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        S++N++ L    +   ++  +  N   ++R V+R ATIEEIEAEK++IE   + RMEK I+TV++NFN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  SASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDVLYKQKEKELLKV
        +DLQK+TD+YMKKI+ + KQKE+EL+K+
Subjt:  SDLQKLTDDYMKKIDVLYKQKEKELLKV

P37706 Ribosome-recycling factor, chloroplastic (Fragment)3.7e-8270.87Show/hide
Query:  WKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIA
        W +A+NYV++       + +  V   + + R G ++ AT+EEIEAEK+LIEK VK RMEKTI+ V+++FNSIRT RSNP MLDKI+VEYYG+P SLKSIA
Subjt:  WKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIA

Query:  QISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKD
        QISTPD+SSLLV PYDKSSLK IEKAIVNSDLG+TPNNDG+VIRL++PQLT++RRKELSK+VAKQAEEGKVA+RNIRRDA+K+Y+KLEKEKKLSEDNVKD
Subjt:  QISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKD

Query:  LSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LSSDLQK+ D+Y+KK+D ++KQKEKEL+ V
Subjt:  LSSDLQKLTDDYMKKIDVLYKQKEKELLKV

P82231 Ribosome-recycling factor, chloroplastic5.6e-8669.11Show/hide
Query:  GLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDK
        G++ ++C  +  ++  W+S++NYVR++      S + +V    L+NR G  R AT+EE+EAEK+LIE + K RMEKTI+T+RSNFNS+RT R++P MLD+
Subjt:  GLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDK

Query:  IEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY
        IEVEYYG+PVSLKSIAQISTPDASSLL+ PYDKSSLK+IEKAIV S LG++PNNDGEVIRL+LP LTS+RRKEL+KVV+K AEEGKVAVRNIRRDALK+Y
Subjt:  IEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY

Query:  EKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        EKLEKEKKLSEDNVKDLS+DLQKLTD+YMKK++ +YKQKE+EL+KV
Subjt:  EKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

Q9M1X0 Ribosome-recycling factor, chloroplastic3.3e-8667.13Show/hide
Query:  MATPFSATTSIRRSL-FHNPPPKPLLSLRDYNGGLNCVKCGSSSAH------LCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNR----RGVVRAATIE
        MA  FS+T      L F     KPLLSL D     +C++  SS+         CS+K+           L L   +++SG  +  R    R V+R+ATIE
Subjt:  MATPFSATTSIRRSL-FHNPPPKPLLSLRDYNGGLNCVKCGSSSAH------LCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNR----RGVVRAATIE

Query:  EIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGE
        EIEAEK+ IE DVK++MEKTI+T+R++FNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNSDLG+TPNNDG+
Subjt:  EIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGE

Query:  VIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        VIRL+LP LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ LYKQKEKEL+KV
Subjt:  VIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor1.5e-2236.52Show/hide
Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ
        ++    ++ME  ID +  +   +RTGR+ P MLD I VE  G  + L  +A +S  D  +L V PYD  ++K +EKAIV S LGL P  DG+ +  ++P 
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKEL
        LT E  + + K+V K +E  K ++R  R+ AL   +K      L +D VK L  ++ +LT  ++K  + + K KEKE+
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKEL

AT3G63190.1 ribosome recycling factor, chloroplast precursor2.3e-8767.13Show/hide
Query:  MATPFSATTSIRRSL-FHNPPPKPLLSLRDYNGGLNCVKCGSSSAH------LCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNR----RGVVRAATIE
        MA  FS+T      L F     KPLLSL D     +C++  SS+         CS+K+           L L   +++SG  +  R    R V+R+ATIE
Subjt:  MATPFSATTSIRRSL-FHNPPPKPLLSLRDYNGGLNCVKCGSSSAH------LCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNR----RGVVRAATIE

Query:  EIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGE
        EIEAEK+ IE DVK++MEKTI+T+R++FNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNSDLG+TPNNDG+
Subjt:  EIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGE

Query:  VIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        VIRL+LP LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ LYKQKEKEL+KV
Subjt:  VIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCCCCTTCTCCGCCACCACCTCTATCCGCCGTTCCCTCTTCCATAATCCCCCTCCCAAACCCCTCCTCTCACTCCGAGATTATAATGGAGGGTTAAAT
TGCGTCAAATGCGGCTCCAGTTCTGCGCATCTTTGTTCATGGAAGTCAGCTTCCAACTACGTCAGGCTCAACCAACGAGCCCTATTGCTCTCTACCCAACTCTCT
GTTTCTGGGAATGTGTTGAAAAACAGAAGGGGAGTTGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTGATCGAGAAAGATGTAAAAGCAAGG
ATGGAAAAGACTATTGATACTGTTCGGTCTAATTTCAATTCAATTAGGACCGGGAGATCAAATCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGT
CCAGTTAGCCTGAAGAGCATTGCTCAAATTAGTACACCTGATGCAAGCTCACTCTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATA
GTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGAAAGGAGCTGTCAAAAGTTGTT
GCAAAGCAGGCAGAGGAAGGGAAGGTTGCAGTAAGGAATATAAGAAGAGATGCTTTAAAAGCGTATGAAAAATTGGAAAAGGAGAAAAAACTTTCGGAAGATAAT
GTTAAGGACTTGTCAAGTGATTTGCAGAAACTGACGGATGACTATATGAAGAAGATTGATGTCTTATACAAGCAAAAAGAGAAGGAATTGTTGAAGGTATGA
mRNA sequenceShow/hide mRNA sequence
GACAAAGCAATGGCCTCCTTTTGAACTTCAAACCATTTCCTTCCCCCTTATCACCTTCGATTCTTTCATTTCCGTATCCATGGCCACCCCCTTCTCCGCCACCAC
CTCTATCCGCCGTTCCCTCTTCCATAATCCCCCTCCCAAACCCCTCCTCTCACTCCGAGATTATAATGGAGGGTTAAATTGCGTCAAATGCGGCTCCAGTTCTGC
GCATCTTTGTTCATGGAAGTCAGCTTCCAACTACGTCAGGCTCAACCAACGAGCCCTATTGCTCTCTACCCAACTCTCTGTTTCTGGGAATGTGTTGAAAAACAG
AAGGGGAGTTGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTGATCGAGAAAGATGTAAAAGCAAGGATGGAAAAGACTATTGATACTGTTCG
GTCTAATTTCAATTCAATTAGGACCGGGAGATCAAATCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCTCA
AATTAGTACACCTGATGCAAGCTCACTCTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCC
AAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGAAAGGAGCTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGGAAGGT
TGCAGTAAGGAATATAAGAAGAGATGCTTTAAAAGCGTATGAAAAATTGGAAAAGGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGTGATTTGCA
GAAACTGACGGATGACTATATGAAGAAGATTGATGTCTTATACAAGCAAAAAGAGAAGGAATTGTTGAAGGTATGACCAAAAGCAAATGGTAGAGAGCTTTCCCT
TTTGATTGCTGTGAAATATGAAATTATCGTTCTTTTTTTCCCCCTTGAATAGAGTTTTGATGTCAATTGTTAGAATCAATCAAACATCTTTTCTTTTTTGGTTGA
AATGAGAGTCAGCAGCCTTGTGGGAAAAAGGTATTCAGCTAGCAATAGCATTATGCCTTTGGTTTTGTTTGTTGTAAAATTGGCACATCTCCAAACTTCTCACTT
TGTACATTGGAACTGACTTTATCATTTACTCAATCATCACCTTTCTTTTTCATCTTTTATTTTGGTCTACT
Protein sequenceShow/hide protein sequence
MATPFSATTSIRRSLFHNPPPKPLLSLRDYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKAR
MEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVV
AKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV