; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003381 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003381
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr08:17832176..17832940
RNA-Seq ExpressionPay0003381
SyntenyPay0003381
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025848.1 pol protein [Cucumis melo var. makuwa]1.8e-14199.61Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQ+SENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

KAA0031437.1 pol protein [Cucumis melo var. makuwa]1.8e-14199.61Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQ+SENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

KAA0032541.1 pol protein [Cucumis melo var. makuwa]1.4e-141100Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

KAA0033825.1 pol protein [Cucumis melo var. makuwa]1.8e-14199.61Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQ+SENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

KAA0061201.1 pol protein [Cucumis melo var. makuwa]1.4e-141100Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

TrEMBL top hitse value%identityAlignment
A0A5A7SSL3 Reverse transcriptase6.8e-142100Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

A0A5A7TEQ2 Reverse transcriptase8.9e-14299.61Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQ+SENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

A0A5A7UBS1 Reverse transcriptase8.9e-14299.61Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQ+SENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

A0A5A7V5X5 Pol protein6.8e-142100Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

A0A5D3CQB5 Reverse transcriptase8.9e-14299.61Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
        TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQ

Query:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS
        KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQ+SENLS
Subjt:  KSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLS

Query:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
        YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED
Subjt:  YEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDMRAQYPELFED

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein9.1e-1934.43Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR
        TDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   +
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR

Query:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY
         K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Subjt:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY

P0CT35 Transposon Tf2-2 polyprotein9.1e-1934.43Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR
        TDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   +
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR

Query:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY
         K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Subjt:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY

P0CT36 Transposon Tf2-3 polyprotein9.1e-1934.43Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR
        TDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   +
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR

Query:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY
         K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Subjt:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY

P0CT41 Transposon Tf2-12 polyprotein9.1e-1934.43Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR
        TDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   +
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR

Query:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY
         K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Subjt:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY

Q9UR07 Transposon Tf2-11 polyprotein9.1e-1934.43Show/hide
Query:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR
        TDGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   +
Subjt:  TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSR

Query:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY
         K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S   +    FH+S L KY
Subjt:  QKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGC
CTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGC
TAGGCCCCGAGTTAGTGCAGACTACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGCTGATGTACGACGTAAGGAC
CTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTAGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGA
GATACTGGAGCGGATTGGCCCCGTGGCTTATCGCTTGGCGCTACCCCCATCTTTTGCGGCAGTGCATGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACC
CAACACATGTGGTGGACTTCGAGCCACTACAGATTAGCGAGAACTTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCGAGGGAGGTCAAGAAGCTTCGCAGTCGAGAA
ATTCCACTGGTCAAAATCCTTTGGCAGAACCATGGAGTGGAAGAGGCCACGTGGGAGAAAGAAGAGGACATGAGAGCCCAGTACCCCGAGCTGTTCGAGGATTAG
mRNA sequenceShow/hide mRNA sequence
ACCGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGC
CTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGC
TAGGCCCCGAGTTAGTGCAGACTACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGCTGATGTACGACGTAAGGAC
CTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTAGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGA
GATACTGGAGCGGATTGGCCCCGTGGCTTATCGCTTGGCGCTACCCCCATCTTTTGCGGCAGTGCATGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACC
CAACACATGTGGTGGACTTCGAGCCACTACAGATTAGCGAGAACTTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCGAGGGAGGTCAAGAAGCTTCGCAGTCGAGAA
ATTCCACTGGTCAAAATCCTTTGGCAGAACCATGGAGTGGAAGAGGCCACGTGGGAGAAAGAAGAGGACATGAGAGCCCAGTACCCCGAGCTGTTCGAGGATTAG
Protein sequenceShow/hide protein sequence
TDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKD
LEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQISENLSYEEQPVEVLAREVKKLRSRE
IPLVKILWQNHGVEEATWEKEEDMRAQYPELFED