| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0055915.1 copia protein [Cucumis melo var. makuwa] | 1.5e-156 | 61.7 | Show/hide |
Query: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQ
MSNN N MGT QPLIPIFKGE TLL SQDLWDLVEQGY DPDDEGKL+EN +KD KALVI QQAVHD+ ILQKAFQ
Subjt: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQ
Query: GDSRVLVVKLQSLRRDFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINR
GDSRVLVVKLQSL+RDFETLMMKNGESI MQTYGE I DQTIVEKVLRSLTPKFDHVV AIEESK+LSTFTFIELMGSL+AHESRIN
Subjt: GDSRVLVVKLQSLRRDFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINR
Query: SMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC--------------------
SME+N+EKAF+VKD+VPKYND+D VMT+G+G G YR RGRGTGK G+QSSN ANIQCYHCKKFGHVKADC
Subjt: SMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC--------------------
Query: ---------------------------------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYV-------PDIGYNLLSVG
LKPVFKELNEGEKLKVELGNSKELQVEGK +GIETH+GNRILTNVQ P N+ +
Subjt: ---------------------------------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYV-------PDIGYNLLSVG
Query: QLMESGYSILFDDGACLIKNKQTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQM
+ + + + +T KFKHFK KVEKQS M IKSLRSDR G+FLSNNFNHFC+EHGIHR+LT PYT +QNGVAERKNRTVVEMAR MLQM
Subjt: QLMESGYSILFDDGACLIKNKQTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQM
Query: KGLSNDFWAEAVSTS------RPTEHLTNK
KGLSNDFW EAVSTS PT+ + NK
Subjt: KGLSNDFWAEAVSTS------RPTEHLTNK
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| KAE8650579.1 hypothetical protein Csa_010963 [Cucumis sativus] | 6.5e-136 | 71.88 | Show/hide |
Query: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQ
M NN NAMGT QPLI IFKGE TLL+SQDLWDLVE YADPDDEGKLRE +KDSKALVI QQAVHDS ILQKAF+
Subjt: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQ
Query: GDSRVLVVKLQSLRRDFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINR
GD RVLVVKLQSLR++FETLMMKN ESI MQTYGE I DQTIVEKVLRSLT KFD VV AIEESK+LSTFTFIELMGSL+AHESRINR
Subjt: GDSRVLVVKLQSLRRDFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINR
Query: SMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGRGTGKG-----------LQSSNNANIQCYHCKKFGHVKADC--------------------
SMERNEEKAFQVKD+VPKYN++DRVMTRGRGRG YRG+GRGT KG +QSSN ANIQCYH KKFGHVKADC
Subjt: SMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGRGTGKG-----------LQSSNNANIQCYHCKKFGHVKADC--------------------
Query: -LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQT
LKP+F ELNEGEKLKVELGN+KELQVE KGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESG+SILFDDGACLIKNKQT
Subjt: -LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQT
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| TYK12002.1 UBN2 domain-containing protein [Cucumis melo var. makuwa] | 6.3e-123 | 66.24 | Show/hide |
Query: DLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQGDSRVLVVKLQSLRRDFETLMMKNGESI------------
+LVEQGYADPDDEGKLR N KKDSK LVI QQAVHDS ILQK FQGDSRVLVVKLQSLRRDFETLMMKNGESI
Subjt: DLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQGDSRVLVVKLQSLRRDFETLMMKNGESI------------
Query: -MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGR
MQTY E IKD TIVEKVLRSLTPKFDHVV IEESK+LSTFTFIELMGSL+AHESRINRSMERNEEKAFQVKD+V KYND+DRV TRGRGRG YRGRG
Subjt: -MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGR
Query: GTGK-----------GLQSSNNANIQCYHCKKFGHVKADC----LKPVFKELNEGEKL--KVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGY
G K G+QSSN ANIQCYH KKFGHVKADC + ++ E +++ +VELGN KELQVEGKGTVGIETHHGNRILT
Subjt: GTGK-----------GLQSSNNANIQCYHCKKFGHVKADC----LKPVFKELNEGEKL--KVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGY
Query: NLLSVGQLMESGYSILFDDGACLIKNK-QTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKN
+ K+K +T KFKHFK KVEKQS M IKSLRSDR GEFLSNNFNHFC+EHGIHR+LT PYTP+QNGV ERKN
Subjt: NLLSVGQLMESGYSILFDDGACLIKNK-QTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKN
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| TYK27735.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 4.1e-162 | 55.89 | Show/hide |
Query: ETLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQGDSRVLVVKLQSLRRDFETLMMKNGESI--
+TLL+SQDLWDLVEQGY DPDDEGKLREN KKDSKALVI QQAVHDS ILQKAFQGDSRVL+VKLQSLRRDFETLMMKNGESI
Subjt: ETLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQGDSRVLVVKLQSLRRDFETLMMKNGESI--
Query: -----------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDIVPKYNDNDRVMTRGR
MQTYGE IKDQTIVEKVLRSLTPKFDHVV AIEESKNL TFTFIELMGSLEAHESRINRSMERNEEKAFQVKD VPKYND+DRVMTRGR
Subjt: -----------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDIVPKYNDNDRVMTRGR
Query: GRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC--------------------------------------------------
GRG YRGRG GT K G+QSSN ANIQCYHCKKFGHVKADC
Subjt: GRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC--------------------------------------------------
Query: ---LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQTER------------
LKPVFKELNEGEKLKV+L N KELQVEGKGTV IETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQT R
Subjt: ---LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQTER------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------KFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEM
KFKHFK KVEKQS M IKSLRSDR EFLSNNFNHFCKEHGIHR+LT PYTP+QNGVAERKN+TVVEM
Subjt: --------------------------------KFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEM
Query: ARIMLQMKGLSNDFWAEAVSTS------RPTEHLTNK
AR MLQMKGL NDFWAEAVS S PT+ + NK
Subjt: ARIMLQMKGLSNDFWAEAVSTS------RPTEHLTNK
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| TYK28117.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 5.3e-162 | 58.5 | Show/hide |
Query: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDSCILQKAFQGDSRVLVVKLQSLRR
MSNN N MGTAQPLIPIFKGE TLL SQDLWDLVEQGY DPDDEGKL+EN +KDSKALVI QQAVHD+ SR+ + R
Subjt: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDSCILQKAFQGDSRVLVVKLQSLRR
Query: DFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDI
DFETLMMKNGESI MQTYGE I DQTIVEKVLRSLTPKFDHVVVAIEESK+LSTFTFIELMGSL+AHESRIN SME+NEEKAF+VKD+
Subjt: DFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDI
Query: VPKYNDNDRVMTRGRGRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC-----------------------------------
VPKYND+D VMT+G+G G YR RGRGTGK G+QSSN ANIQCYHCKKFGHVKADC
Subjt: VPKYNDNDRVMTRGRGRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC-----------------------------------
Query: ------------------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQ
LKPVFKELNEGEKLKVELGN KELQVEGK T+GIETH+GNRILTNVQYVPDIGYNLLSVGQLMESG+SILFDDGACLIKNKQ
Subjt: ------------------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQ
Query: TER--------------------------------------------------------------------------------KFKHFKTKVEKQSDMSI
T R KFKHFK KVEKQS M I
Subjt: TER--------------------------------------------------------------------------------KFKHFKTKVEKQSDMSI
Query: KSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS------RPTEHLTNK
KS RSDR G+FLSNNFNHFC+EHGIHR+LT PYT +QNGVAERKNRTVVEMAR MLQMKGLSNDFW EA STS PT+ + NK
Subjt: KSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS------RPTEHLTNK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZP7 Putative gag-pol polyprotein, identical | 5.4e-120 | 67.26 | Show/hide |
Query: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDSCILQKAFQGDSRVLVVKLQSLRR
M +N N MGT QPLIPIFKGE TLL+SQDLWDLVEQGY DPDD+GKLREN KKDSKALVI QQAVHDS SR++ + R
Subjt: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDSCILQKAFQGDSRVLVVKLQSLRR
Query: DFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDI
DFETLMMKNGESI MQTYGE IKDQTIVEKVL SLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQ
Subjt: DFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDI
Query: VPKYNDNDRVMTRGRGRGRYRGRGRGTGKGLQSSNNANIQCYHCKKFGHV---KADC------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETH
+ N RV GKG NI +K G V + C LKPVFKELNEGEKLKVEL N KELQVEGKGTVGIETH
Subjt: VPKYNDNDRVMTRGRGRGRYRGRGRGTGKGLQSSNNANIQCYHCKKFGHV---KADC------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETH
Query: HGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIH
HGNRILTNVQYVPDIGYNLLSVGQLMESG SILFDD + +T KFKHFK KVEKQS M IKSLRSDR GEFLSNNFNHFCKEHGIH
Subjt: HGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIH
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| A0A5A7UQM0 Copia protein | 7.2e-157 | 61.7 | Show/hide |
Query: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQ
MSNN N MGT QPLIPIFKGE TLL SQDLWDLVEQGY DPDDEGKL+EN +KD KALVI QQAVHD+ ILQKAFQ
Subjt: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQ
Query: GDSRVLVVKLQSLRRDFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINR
GDSRVLVVKLQSL+RDFETLMMKNGESI MQTYGE I DQTIVEKVLRSLTPKFDHVV AIEESK+LSTFTFIELMGSL+AHESRIN
Subjt: GDSRVLVVKLQSLRRDFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINR
Query: SMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC--------------------
SME+N+EKAF+VKD+VPKYND+D VMT+G+G G YR RGRGTGK G+QSSN ANIQCYHCKKFGHVKADC
Subjt: SMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC--------------------
Query: ---------------------------------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYV-------PDIGYNLLSVG
LKPVFKELNEGEKLKVELGNSKELQVEGK +GIETH+GNRILTNVQ P N+ +
Subjt: ---------------------------------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYV-------PDIGYNLLSVG
Query: QLMESGYSILFDDGACLIKNKQTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQM
+ + + + +T KFKHFK KVEKQS M IKSLRSDR G+FLSNNFNHFC+EHGIHR+LT PYT +QNGVAERKNRTVVEMAR MLQM
Subjt: QLMESGYSILFDDGACLIKNKQTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQM
Query: KGLSNDFWAEAVSTS------RPTEHLTNK
KGLSNDFW EAVSTS PT+ + NK
Subjt: KGLSNDFWAEAVSTS------RPTEHLTNK
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| A0A5D3CL10 UBN2 domain-containing protein | 3.1e-123 | 66.24 | Show/hide |
Query: DLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQGDSRVLVVKLQSLRRDFETLMMKNGESI------------
+LVEQGYADPDDEGKLR N KKDSK LVI QQAVHDS ILQK FQGDSRVLVVKLQSLRRDFETLMMKNGESI
Subjt: DLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQGDSRVLVVKLQSLRRDFETLMMKNGESI------------
Query: -MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGR
MQTY E IKD TIVEKVLRSLTPKFDHVV IEESK+LSTFTFIELMGSL+AHESRINRSMERNEEKAFQVKD+V KYND+DRV TRGRGRG YRGRG
Subjt: -MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDIVPKYNDNDRVMTRGRGRGRYRGRGR
Query: GTGK-----------GLQSSNNANIQCYHCKKFGHVKADC----LKPVFKELNEGEKL--KVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGY
G K G+QSSN ANIQCYH KKFGHVKADC + ++ E +++ +VELGN KELQVEGKGTVGIETHHGNRILT
Subjt: GTGK-----------GLQSSNNANIQCYHCKKFGHVKADC----LKPVFKELNEGEKL--KVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGY
Query: NLLSVGQLMESGYSILFDDGACLIKNK-QTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKN
+ K+K +T KFKHFK KVEKQS M IKSLRSDR GEFLSNNFNHFC+EHGIHR+LT PYTP+QNGV ERKN
Subjt: NLLSVGQLMESGYSILFDDGACLIKNK-QTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKN
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| A0A5D3DWC7 Putative gag-pol polyprotein, identical | 2.6e-162 | 58.5 | Show/hide |
Query: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDSCILQKAFQGDSRVLVVKLQSLRR
MSNN N MGTAQPLIPIFKGE TLL SQDLWDLVEQGY DPDDEGKL+EN +KDSKALVI QQAVHD+ SR+ + R
Subjt: MSNNDNAMGTAQPLIPIFKGE----------TLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDSCILQKAFQGDSRVLVVKLQSLRR
Query: DFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDI
DFETLMMKNGESI MQTYGE I DQTIVEKVLRSLTPKFDHVVVAIEESK+LSTFTFIELMGSL+AHESRIN SME+NEEKAF+VKD+
Subjt: DFETLMMKNGESI-------------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDI
Query: VPKYNDNDRVMTRGRGRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC-----------------------------------
VPKYND+D VMT+G+G G YR RGRGTGK G+QSSN ANIQCYHCKKFGHVKADC
Subjt: VPKYNDNDRVMTRGRGRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC-----------------------------------
Query: ------------------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQ
LKPVFKELNEGEKLKVELGN KELQVEGK T+GIETH+GNRILTNVQYVPDIGYNLLSVGQLMESG+SILFDDGACLIKNKQ
Subjt: ------------------LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQ
Query: TER--------------------------------------------------------------------------------KFKHFKTKVEKQSDMSI
T R KFKHFK KVEKQS M I
Subjt: TER--------------------------------------------------------------------------------KFKHFKTKVEKQSDMSI
Query: KSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS------RPTEHLTNK
KS RSDR G+FLSNNFNHFC+EHGIHR+LT PYT +QNGVAERKNRTVVEMAR MLQMKGLSNDFW EA STS PT+ + NK
Subjt: KSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS------RPTEHLTNK
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| A0A5D3DWP2 Putative gag-pol polyprotein, identical | 2.0e-162 | 55.89 | Show/hide |
Query: ETLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQGDSRVLVVKLQSLRRDFETLMMKNGESI--
+TLL+SQDLWDLVEQGY DPDDEGKLREN KKDSKALVI QQAVHDS ILQKAFQGDSRVL+VKLQSLRRDFETLMMKNGESI
Subjt: ETLLKSQDLWDLVEQGYADPDDEGKLRENMKKDSKALVITQQAVHDS---------------CILQKAFQGDSRVLVVKLQSLRRDFETLMMKNGESI--
Query: -----------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDIVPKYNDNDRVMTRGR
MQTYGE IKDQTIVEKVLRSLTPKFDHVV AIEESKNL TFTFIELMGSLEAHESRINRSMERNEEKAFQVKD VPKYND+DRVMTRGR
Subjt: -----------MQTYGEAIKDQTIVEKVLRSLTPKFDHVVVAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDIVPKYNDNDRVMTRGR
Query: GRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC--------------------------------------------------
GRG YRGRG GT K G+QSSN ANIQCYHCKKFGHVKADC
Subjt: GRGRYRGRGRGTGK-----------GLQSSNNANIQCYHCKKFGHVKADC--------------------------------------------------
Query: ---LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQTER------------
LKPVFKELNEGEKLKV+L N KELQVEGKGTV IETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQT R
Subjt: ---LKPVFKELNEGEKLKVELGNSKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQTER------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------KFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEM
KFKHFK KVEKQS M IKSLRSDR EFLSNNFNHFCKEHGIHR+LT PYTP+QNGVAERKN+TVVEM
Subjt: --------------------------------KFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEM
Query: ARIMLQMKGLSNDFWAEAVSTS------RPTEHLTNK
AR MLQMKGL NDFWAEAVS S PT+ + NK
Subjt: ARIMLQMKGLSNDFWAEAVSTS------RPTEHLTNK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O13527 Truncated transposon Ty1-A Gag-Pol polyprotein | 3.3e-05 | 31.71 | Show/hide |
Query: VEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS
++ Q S+ ++ DR E+ + + F +++GI T + +GVAER NRT+++ R LQ GL N W A+ S
Subjt: VEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.4e-18 | 43.1 | Show/hide |
Query: YSILFDDGAC------LIKNK-QTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQ
Y + F D A ++K K Q + F+ F VE+++ +K LRSD GE+ S F +C HGI + T+P TP+ NGVAER NRT+VE R ML+
Subjt: YSILFDDGAC------LIKNK-QTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQ
Query: MKGLSNDFWAEAVSTS
M L FW EAV T+
Subjt: MKGLSNDFWAEAVSTS
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| Q07163 Transposon TyH3 Gag-Pol polyprotein | 3.3e-05 | 31.71 | Show/hide |
Query: VEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS
++ Q S+ ++ DR E+ + + F +++GI T + +GVAER NRT+++ R LQ GL N W A+ S
Subjt: VEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 3.3e-05 | 31.71 | Show/hide |
Query: VEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS
++ Q S+ ++ DR E+ + + F +++GI T + +GVAER NRT+++ R LQ GL N W A+ S
Subjt: VEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.6e-07 | 33.33 | Show/hide |
Query: LIKNKQTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS
L + Q + F FK+ VE + I +L SD GEF+ + +HGI + P+TP+ NG++ERK+R +VEM +L + +W A S +
Subjt: LIKNKQTERKFKHFKTKVEKQSDMSIKSLRSDRSGEFLSNNFNHFCKEHGIHRKLTIPYTPKQNGVAERKNRTVVEMARIMLQMKGLSNDFWAEAVSTS
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