; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003633 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003633
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr09:1220413..1222567
RNA-Seq ExpressionPay0003633
SyntenyPay0003633
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-13990.11Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFS  SA    SASSP T K VA+FGKKPAA  KPKP+  SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

XP_004141516.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucumis sativus]5.6e-14593.59Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAASTAAASLGVSEMLRNPLSFSSRSA PS S+PATFKTVALFGKKPAAP+KPKP+ ASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
        DYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
Subjt:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII

Query:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

XP_008459494.1 PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Cucumis melo]5.8e-15096.09Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
        DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
Subjt:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII

Query:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]2.1e-13990.11Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS S  SA    SASSP T K VA+FGKKPAA  KPKP+  SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]1.3e-14493.29Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFS  SA   PSASSPATFKTVALFGKKPAAPSKPKP+  SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic2.7e-14593.59Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAASTAAASLGVSEMLRNPLSFSSRSA PS S+PATFKTVALFGKKPAAP+KPKP+ ASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
        DYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
Subjt:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII

Query:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic2.8e-15096.09Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
        DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
Subjt:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII

Query:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic1.9e-13891.2Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE
        MASLAASTAAASLGVSEMLRNPLSF   S RSA PSASS  T KTVALFGKKPAA +KP  A  SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE

Query:  VPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYY
        VPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYY
Subjt:  VPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYY

Query:  RIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        RIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  RIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic3.8e-13990.11Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFS  SA    SASSP T K VALFGKKPA   KPKP+  SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic1.0e-13990.11Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS S  SA    SASSP T K VA+FGKKPAA  KPKP+  SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS      L + + G
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

SwissProt top hitse value%identityAlignment
P09756 Chlorophyll a-b binding protein 3, chloroplastic3.4e-5247.79Show/hide
Query:  SASSPATFKTVALFGKK----PAAPSKPKPAPASPVNDELAK---WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELI
        +A+S     + +L GK     P+AP   + +    V  +++    WYGPDR  +L        E P YL GE PGDYG+D  GLS  PE F+K +  E+I
Subjt:  SASSPATFKTVALFGKK----PAAPSKPKPAPASPVNDELAK---WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELI

Query:  HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGL
        H+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +V+L+G  E YRI  G   E  D ++PGG FDPLGL
Subjt:  HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGL

Query:  ADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSG
        ADDP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+G
Subjt:  ADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSG

P12330 Chlorophyll a-b binding protein 1, chloroplastic4.0e-5349.81Show/hide
Query:  AAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        AAA++ +S  +       +R+AP  ++S A F    +  +K AA  KPKPA +S      + WYG DR ++L  G L   E P YL GE PGDYG+D  G
Subjt:  AAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNF
        LS  PE F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YRI  G   
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNF

Query:  E--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS
        E  D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+
Subjt:  E--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLS

P27497 Chlorophyll a-b binding protein M9, chloroplastic6.9e-5352.21Show/hide
Query:  KKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFG
        +K AA +KP  +  SP       WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G + PE   + G
Subjt:  KKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFG

Query:  ANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAM
           G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YR+  G   E  D L+PGG FDPLGLADDP+  A +KVKE+KNGRLAM
Subjt:  ANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAM

Query:  FAMLGFYFQAYVTGEGPVENLAKHLS
        F+M GF+ QA VTG+GP+ENLA HL+
Subjt:  FAMLGFYFQAYVTGEGPVENLAKHLS

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic2.3e-5652.78Show/hide
Query:  KWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
        ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE  +++      E VWFK GA +     L
Subjt:  KWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL

Query:  NYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVEN
        NY GN   I   ++I  +  +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKEIKNGRLAMF+ LGF+ QA VTG+GPV+N
Subjt:  NYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVEN

Query:  LAKHLSGLLLRKLFSS
        L  HL+   + K F+S
Subjt:  LAKHLSGLLLRKLFSS

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic4.4e-12480.95Show/hide
Query:  ASLGVSEMLRNPLSFS--SRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   SRS+ P ASSP+TFKTVALF KK  AP+K K    S  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSFS--SRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLS      L + + G
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 31.1e-5050.23Show/hide
Query:  SKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        +KPK    SP       WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F++ +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  SKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        AVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M G
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLS
        F+ QA VTG+GP+ENLA HL+
Subjt:  FYFQAYVTGEGPVENLAKHLS

AT1G29920.1 chlorophyll A/B-binding protein 21.1e-5050.23Show/hide
Query:  SKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        +KPK    SP       WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F++ +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  SKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        AVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M G
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLS
        F+ QA VTG+GP+ENLA HL+
Subjt:  FYFQAYVTGEGPVENLAKHLS

AT2G05070.1 photosystem II light harvesting complex gene 2.25.6e-5052.71Show/hide
Query:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN
        WYGPDR  +L          P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L+
Subjt:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN

Query:  YFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK
        Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL  
Subjt:  YFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK

Query:  HLS
        HL+
Subjt:  HLS

AT2G05100.1 photosystem II light harvesting complex gene 2.15.6e-5052.71Show/hide
Query:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN
        WYGPDR  +L          P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L+
Subjt:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN

Query:  YFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK
        Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL  
Subjt:  YFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK

Query:  HLS
        HL+
Subjt:  HLS

AT4G10340.1 light harvesting complex of photosystem II 53.1e-12580.95Show/hide
Query:  ASLGVSEMLRNPLSFS--SRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   SRS+ P ASSP+TFKTVALF KK  AP+K K    S  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSFS--SRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLS      L + + G
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTGGCAGCTTCCACCGCCGCCGCCTCCCTCGGCGTCTCCGAAATGCTAAGAAATCCTCTTAGCTTCTCCTCTAGGTCCGCTCCTCCCTCGGCCTCCAGCCC
TGCCACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCCGCAGCACCGTCCAAGCCAAAGCCCGCCCCCGCGTCTCCCGTCAACGACGAGCTCGCCAAGTGGTATGGTC
CGGACAGAAGGATTTTCTTGCCAGATGGTTTGTTGGACCGATCGGAGATCCCCGAGTACTTGAACGGAGAAGTCCCCGGCGACTATGGTTATGACCCCTTTGGACTCAGC
AAGAAGCCAGAAGACTTCAGCAAATACCAAGCATTTGAATTGATTCATGCAAGATGGGCTATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGG
CGCCAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACCGGAGCTCTACTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCCG
TCATTGCCGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCGGGAGGGCCATTCGACCCATTGGGGTTA
GCGGACGACCCAGACCAGGCAGCAATCTTGAAGGTGAAAGAGATCAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGA
AGGGCCAGTGGAGAATTTGGCAAAGCATTTGAGTGGACTTCTCCTCCGAAAACTTTTCTCTTCTTTAGTGGGAAAACATTTGCACATTACAAAAGTAACATCGATGCTTC
AGGTGAATGCTGCAAACAACAAGAAAAGAAATGTCACAACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTGGCAGCTTCCACCGCCGCCGCCTCCCTCGGCGTCTCCGAAATGCTAAGAAATCCTCTTAGCTTCTCCTCTAGGTCCGCTCCTCCCTCGGCCTCCAGCCC
TGCCACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCCGCAGCACCGTCCAAGCCAAAGCCCGCCCCCGCGTCTCCCGTCAACGACGAGCTCGCCAAGTGGTATGGTC
CGGACAGAAGGATTTTCTTGCCAGATGGTTTGTTGGACCGATCGGAGATCCCCGAGTACTTGAACGGAGAAGTCCCCGGCGACTATGGTTATGACCCCTTTGGACTCAGC
AAGAAGCCAGAAGACTTCAGCAAATACCAAGCATTTGAATTGATTCATGCAAGATGGGCTATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGG
CGCCAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACCGGAGCTCTACTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCCG
TCATTGCCGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCGGGAGGGCCATTCGACCCATTGGGGTTA
GCGGACGACCCAGACCAGGCAGCAATCTTGAAGGTGAAAGAGATCAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGA
AGGGCCAGTGGAGAATTTGGCAAAGCATTTGAGTGGACTTCTCCTCCGAAAACTTTTCTCTTCTTTAGTGGGAAAACATTTGCACATTACAAAAGTAACATCGATGCTTC
AGGTGAATGCTGCAAACAACAAGAAAAGAAATGTCACAACTCTTTAAAATCCATACTAGTATAGGAAGTTATTGAAAACTAGAATCAATCAATGCTAATTGAAATGTTGA
ATTATAAAAAAGTTCCTACTTAGCCATCAGACAAGTTTGTGTATTGAAGGATGAAAAATCTTGAATGCTTTTGTAAATTGGTATTGAGACT
Protein sequenceShow/hide protein sequence
MASLAASTAAASLGVSEMLRNPLSFSSRSAPPSASSPATFKTVALFGKKPAAPSKPKPAPASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGL
ADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSGLLLRKLFSSLVGKHLHITKVTSMLQVNAANNKKRNVTTL