; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003635 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003635
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:27226004..27227002
RNA-Seq ExpressionPay0003635
SyntenyPay0003635
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053709.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.1e-18498.49Show/hide
Query:  MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY
        MTLRSLLATYPLLLLYVDDMIITGN+PQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY
Subjt:  MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY

Query:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYL
        DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADW GDPTDRRSTTRYCFYL
Subjt:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYL

Query:  RDSLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST
        RD LISWRSKKQSVVSRSSTESEYHAL DTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST
Subjt:  RDSLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST

Query:  TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP
        TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP
Subjt:  TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP

KAA0057482.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.1e-16994.7Show/hide
Query:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGN+PQAISDLQHYLGQHFEMKDLGSLNYFLG EVSRRSDGYLLSQAKYASDLLARSGI +SNTASTPLD NVHLTPYDGVPLE+VSLY
Subjt:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK
        RQLVGSLIYLTVT PDIAY VHIVSQFMAAPRTIHFT VLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK

Query:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA
        QSVVSRSSTESEY AL DTTAELLWL WLLADMGVPQQGPTLL+CDNRSAIQIAHNDVF+ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA
Subjt:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA

Query:  LPSTRFNQLRTKLKLTVTLPP
        LPSTRFNQLRTKLKLT TLPP
Subjt:  LPSTRFNQLRTKLKLTVTLPP

KAA0064060.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.2e-17095.33Show/hide
Query:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGN+PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGI DSNTASTPLD NVHLTPYDGVPLE+VSLY
Subjt:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK
        RQLVGSLIYLTVT PDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADW GDPTDRRSTT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK

Query:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA
        QSVVSRSSTESEY AL DTTAELLWL WLLADMGVPQQGPTLL+CDNRSAIQIAHNDVF+ERTKHIENDCHFIRHHLLSNTLLLQPV TTEQPADIFTKA
Subjt:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA

Query:  LPSTRFNQLRTKLKLTVTLPP
        LPSTRFNQLRTKLKLT TLPP
Subjt:  LPSTRFNQLRTKLKLTVTLPP

TYK30390.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.6e-16994.7Show/hide
Query:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGN+PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGI DSNTASTPLD NVHLTPYDGVPLE+VSLY
Subjt:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK
        RQLVGSLIYLTVT PDI YAVHIVSQFMAAPRTIHFT VLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADW GDPTDRRSTT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK

Query:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA
        QSVVSRSSTESEY AL DTTAELLWL WLLADMGVPQQGPTLL+CDNRSAIQIAHNDVF+ERTKHIENDCHFIRHHLLSNTLLLQPVSTT+QPADIFTKA
Subjt:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA

Query:  LPSTRFNQLRTKLKLTVTLPP
        LPSTRFNQLRTKLKLT TLPP
Subjt:  LPSTRFNQLRTKLKLTVTLPP

XP_016899671.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]5.1e-18498.49Show/hide
Query:  MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY
        MTLRSLLATYPLLLLYVDDMIITGN+PQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY
Subjt:  MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY

Query:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYL
        DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADW GDPTDRRSTTRYCFYL
Subjt:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYL

Query:  RDSLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST
        RD LISWRSKKQSVVSRSSTESEYHAL DTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST
Subjt:  RDSLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST

Query:  TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP
        TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP
Subjt:  TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP

TrEMBL top hitse value%identityAlignment
A0A1S4DUL1 uncharacterized mitochondrial protein AtMg00810-like2.5e-18498.49Show/hide
Query:  MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY
        MTLRSLLATYPLLLLYVDDMIITGN+PQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY
Subjt:  MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY

Query:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYL
        DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADW GDPTDRRSTTRYCFYL
Subjt:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYL

Query:  RDSLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST
        RD LISWRSKKQSVVSRSSTESEYHAL DTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST
Subjt:  RDSLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST

Query:  TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP
        TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP
Subjt:  TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP

A0A5A7UJQ7 Putative mitochondrial protein2.5e-18498.49Show/hide
Query:  MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY
        MTLRSLLATYPLLLLYVDDMIITGN+PQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY
Subjt:  MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPY

Query:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYL
        DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADW GDPTDRRSTTRYCFYL
Subjt:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYL

Query:  RDSLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST
        RD LISWRSKKQSVVSRSSTESEYHAL DTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST
Subjt:  RDSLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVST

Query:  TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP
        TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP
Subjt:  TEQPADIFTKALPSTRFNQLRTKLKLTVTLPP

A0A5A7UNP5 Putative mitochondrial protein1.0e-16994.7Show/hide
Query:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGN+PQAISDLQHYLGQHFEMKDLGSLNYFLG EVSRRSDGYLLSQAKYASDLLARSGI +SNTASTPLD NVHLTPYDGVPLE+VSLY
Subjt:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK
        RQLVGSLIYLTVT PDIAY VHIVSQFMAAPRTIHFT VLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK

Query:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA
        QSVVSRSSTESEY AL DTTAELLWL WLLADMGVPQQGPTLL+CDNRSAIQIAHNDVF+ERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA
Subjt:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA

Query:  LPSTRFNQLRTKLKLTVTLPP
        LPSTRFNQLRTKLKLT TLPP
Subjt:  LPSTRFNQLRTKLKLTVTLPP

A0A5A7V9Z8 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-17095.33Show/hide
Query:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGN+PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGI DSNTASTPLD NVHLTPYDGVPLE+VSLY
Subjt:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK
        RQLVGSLIYLTVT PDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADW GDPTDRRSTT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK

Query:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA
        QSVVSRSSTESEY AL DTTAELLWL WLLADMGVPQQGPTLL+CDNRSAIQIAHNDVF+ERTKHIENDCHFIRHHLLSNTLLLQPV TTEQPADIFTKA
Subjt:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA

Query:  LPSTRFNQLRTKLKLTVTLPP
        LPSTRFNQLRTKLKLT TLPP
Subjt:  LPSTRFNQLRTKLKLTVTLPP

A0A5D3E4B0 Putative mitochondrial protein7.7e-17094.7Show/hide
Query:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGN+PQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGI DSNTASTPLD NVHLTPYDGVPLE+VSLY
Subjt:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK
        RQLVGSLIYLTVT PDI YAVHIVSQFMAAPRTIHFT VLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADW GDPTDRRSTT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKK

Query:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA
        QSVVSRSSTESEY AL DTTAELLWL WLLADMGVPQQGPTLL+CDNRSAIQIAHNDVF+ERTKHIENDCHFIRHHLLSNTLLLQPVSTT+QPADIFTKA
Subjt:  QSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA

Query:  LPSTRFNQLRTKLKLTVTLPP
        LPSTRFNQLRTKLKLT TLPP
Subjt:  LPSTRFNQLRTKLKLTVTLPP

SwissProt top hitse value%identityAlignment
P04146 Copia protein8.2e-5237.07Show/hide
Query:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPL--DLNVHLTPYDGVPLEDVSL
        +LLYVDD++I   +   +++ + YL + F M DL  + +F+G+ +  + D   LSQ+ Y   +L++  + + N  STPL   +N  L   D    ED + 
Subjt:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPL--DLNVHLTPYDGVPLEDVSL

Query:  -YRQLVGSLIYLTV-THPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSL--VLSGYSDADWVGDPTDRRSTTRYCFYLRD-SLI
          R L+G L+Y+ + T PD+  AV+I+S++ +   +  +  + R+LRY+KGT+   L F    +    + GY D+DW G   DR+STT Y F + D +LI
Subjt:  -YRQLVGSLIYLTV-THPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSL--VLSGYSDADWVGDPTDRRSTTRYCFYLRD-SLI

Query:  SWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPA
         W +K+Q+ V+ SSTE+EY AL +   E LWL +LL  + +  + P  ++ DN+  I IA+N   ++R KHI+   HF R  + +N + L+ + T  Q A
Subjt:  SWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPA

Query:  DIFTKALPSTRFNQLRTKLKL
        DIFTK LP+ RF +LR KL L
Subjt:  DIFTKALPSTRFNQLRTKLKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-5039.37Show/hide
Query:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSQAKYASDLLARSGIIDSNTASTP----LDLNVHLTPYDGVPL
        +LLLYVDDM+I G +   I+ L+  L + F+MKDLG     LG+++   R S    LSQ KY   +L R  + ++   STP    L L+  + P      
Subjt:  LLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSQAKYASDLLARSGIIDSNTASTP----LDLNVHLTPYDGVPL

Query:  EDVSL--YRQLVGSLIYLTV-THPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRD
         +++   Y   VGSL+Y  V T PDIA+AV +VS+F+  P   H+  V  ILRY++GT G  L F   S  +L GY+DAD  GD  +R+S+T Y F    
Subjt:  EDVSL--YRQLVGSLIYLTV-THPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRD

Query:  SLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTE
          ISW+SK Q  V+ S+TE+EY A  +T  E++WL   L ++G+ Q+   +++CD++SAI ++ N +++ RTKHI+   H+IR  +   +L +  +ST E
Subjt:  SLISWRSKKQSVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTE

Query:  QPADIFTKALPSTRF
         PAD+ TK +P  +F
Subjt:  QPADIFTKALPSTRF

P92519 Uncharacterized mitochondrial protein AtMg008102.9e-4945.54Show/hide
Query:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        LLLYVDD+++TG++   ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA  +L  +G++D    STPL L ++ +        D S +R
Subjt:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ
         +VG+L YLT+T PDI+YAV+IV Q M  P    F ++ R+LRY+KGT+ HGL     S L +  + D+DW G  + RRSTT +C +L  ++ISW +K+Q
Subjt:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ

Query:  SVVSRSSTESEYHALVDTTAELLW
          VSRSSTE+EY AL  T AEL W
Subjt:  SVVSRSSTESEYHALVDTTAELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE17.4e-6944.38Show/hide
Query:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        +L+YVDD++ITGN+P  + +    L Q F +KD   L+YFLG+E  R   G  LSQ +Y  DLLAR+ +I +   +TP+  +  L+ Y G  L D + YR
Subjt:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ
         +VGSL YL  T PDI+YAV+ +SQFM  P   H   + RILRY+ GT  HG+     ++L L  YSDADW GD  D  ST  Y  YL    ISW SKKQ
Subjt:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ

Query:  SVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKAL
          V RSSTE+EY ++ +T++E+ W+C LL ++G+    P +++CDN  A  +  N VF+ R KHI  D HFIR+ + S  L +  VST +Q AD  TK L
Subjt:  SVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKAL

Query:  PSTRFNQLRTKLKLTVTLPP
          T F    +K+ +T  +PP
Subjt:  PSTRFNQLRTKLKLTVTLPP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.4e-6642.19Show/hide
Query:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        +L+YVDD++ITGN+   +      L Q F +K+   L+YFLG+E  R   G  LSQ +Y  DLLAR+ ++ +   +TP+  +  LT + G  L D + YR
Subjt:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ
         +VGSL YL  T PD++YAV+ +SQ+M  P   H+  + R+LRY+ GT  HG+     ++L L  YSDADW GD  D  ST  Y  YL    ISW SKKQ
Subjt:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ

Query:  SVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKAL
          V RSSTE+EY ++ +T++EL W+C LL ++G+    P +++CDN  A  +  N VF+ R KHI  D HFIR+ + S  L +  VST +Q AD  TK L
Subjt:  SVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKAL

Query:  PSTRFNQLRTKLKLTVTLPP
            F     K+ + + +PP
Subjt:  PSTRFNQLRTKLKLTVTLPP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.2e-7048.35Show/hide
Query:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        +L+YVDD+II  NN  A+ +L+  L   F+++DLG L YFLGLE++R + G  + Q KYA DLL  +G++    +S P+D +V  + + G    D   YR
Subjt:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ
        +L+G L+YL +T  DI++AV+ +SQF  APR  H   V++IL YIKGT+G GL +SSQ+ + L  +SDA +      RRST  YC +L  SLISW+SKKQ
Subjt:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ

Query:  SVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIR
         VVS+SS E+EY AL   T E++WL     ++ +P   PTLL CDN +AI IA N VF+ERTKHIE+DCH +R
Subjt:  SVVSRSSTESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIR

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.3e-1545.57Show/hide
Query:  IYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYC
        +YLT+T PD+ +AV+ +SQF +A RT     V ++L Y+KGT+G GL +S+ S L L  ++D+DW   P  RRS T +C
Subjt:  IYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYC

ATMG00810.1 DNA/RNA polymerases superfamily protein2.1e-5045.54Show/hide
Query:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        LLLYVDD+++TG++   ++ L   L   F MKDLG ++YFLG+++     G  LSQ KYA  +L  +G++D    STPL L ++ +        D S +R
Subjt:  LLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ
         +VG+L YLT+T PDI+YAV+IV Q M  P    F ++ R+LRY+KGT+ HGL     S L +  + D+DW G  + RRSTT +C +L  ++ISW +K+Q
Subjt:  QLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQ

Query:  SVVSRSSTESEYHALVDTTAELLW
          VSRSSTE+EY AL  T AEL W
Subjt:  SVVSRSSTESEYHALVDTTAELLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTGCGCTCTTTACTCGCCACATACCCCCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATAATCCACAGGCCATATCCGATCTCCAACATTACCT
TGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGACGCTCGGACGGGTATTTATTGTCTCAAGCTAAATATGCCTCTG
ATCTTTTAGCTCGCTCAGGAATCATTGACTCTAACACAGCTTCAACGCCGTTAGATCTCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTG
TATCGGCAACTCGTTGGCAGTCTCATCTATCTAACAGTGACTCACCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATTCATTT
TACTGTTGTACTACGTATCCTTCGCTATATCAAGGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTCGTATTATCTGGCTATTCTGATGCAGATTGGG
TTGGGGATCCCACTGATCGGCGTTCTACAACAAGATACTGCTTCTACTTACGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACT
GAATCAGAATATCATGCTCTTGTTGATACTACTGCCGAACTTTTATGGCTTTGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTCATTGTGA
TAATCGTAGTGCCATCCAAATTGCCCACAATGACGTTTTCTATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTGAGTAACACACTTC
TTTTGCAACCTGTCTCCACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGCTGACAGTTACTCTA
CCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACACTGCGCTCTTTACTCGCCACATACCCCCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATAATCCACAGGCCATATCCGATCTCCAACATTACCT
TGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGACGCTCGGACGGGTATTTATTGTCTCAAGCTAAATATGCCTCTG
ATCTTTTAGCTCGCTCAGGAATCATTGACTCTAACACAGCTTCAACGCCGTTAGATCTCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTG
TATCGGCAACTCGTTGGCAGTCTCATCTATCTAACAGTGACTCACCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATTCATTT
TACTGTTGTACTACGTATCCTTCGCTATATCAAGGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTCGTATTATCTGGCTATTCTGATGCAGATTGGG
TTGGGGATCCCACTGATCGGCGTTCTACAACAAGATACTGCTTCTACTTACGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACT
GAATCAGAATATCATGCTCTTGTTGATACTACTGCCGAACTTTTATGGCTTTGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTCATTGTGA
TAATCGTAGTGCCATCCAAATTGCCCACAATGACGTTTTCTATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTGAGTAACACACTTC
TTTTGCAACCTGTCTCCACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGCTGACAGTTACTCTA
CCACCTTGA
Protein sequenceShow/hide protein sequence
MTLRSLLATYPLLLLYVDDMIITGNNPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGIIDSNTASTPLDLNVHLTPYDGVPLEDVSL
YRQLVGSLIYLTVTHPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTRYCFYLRDSLISWRSKKQSVVSRSST
ESEYHALVDTTAELLWLCWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFYERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTVTL
PP