; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003661 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003661
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Genome locationchr09:6621186..6623223
RNA-Seq ExpressionPay0003661
SyntenyPay0003661
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031752.1 uncharacterized protein E6C27_scaffold506G00150 [Cucumis melo var. makuwa]5.0e-29178.35Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTL+GAELNYSPIEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLV K DPVKYILSRPVIS  LAK AIILQQYDI+YIPQKAVKGQ L DFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        V IVFISPEK+MLPYSFTLGELCS+NV EYQA IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDS+ILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------
        KADALANL TALTVSEDIPINISLCQKWIVPSIESQYEEADVISVY IDEEDW QPIIDYLEHGKLPT PRHRAEIR                       
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------

Query:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS
            KEESTKALEEAHSGICG HQSG KLQYQLKRM                   A  F  +F+               FEAWGLDLV PI PKS  GHS
Subjt:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS

Query:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA
        YILAGTDYFSKWAE VPLREAKKENIV      I++R    H   TD                     +KSSMYN  ANGL EAFNKTLCSLLKKVVSK 
Subjt:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA

Query:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
        KRDWQEKIGEALWAYRTTHRT TGVTPYSLVYGVE VL LEREI SLRMA QEGLTTEDNA+LRL+ELEALDEKRLEAQ
Subjt:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]5.0e-29178.35Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTL+GAELNYSPIEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLV K DPVKYILSRPVIS  LAK AIILQQYDI+YIPQKAVKGQ L DFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        V IVFISPEK+MLPYSFTLGELCS+NV EYQA IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDS+ILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------
        KADALANL TALTVSEDIPINISLCQKWIVPSIESQYEEADVISVY IDEEDW QPIIDYLEHGKLPT PRHRAEIR                       
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------

Query:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS
            KEESTKALEEAHSGICG HQSG KLQYQLKRM                   A  F  +F+               FEAWGLDLV PI PKS  GHS
Subjt:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS

Query:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA
        YILAGTDYFSKWAE VPLREAKKENIV      I++R    H   TD                     +KSSMYN  ANGL EAFNKTLCSLLKKVVSK 
Subjt:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA

Query:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
        KRDWQEKIGEALWAYRTTHRT TGVTPYSLVYGVE VL LEREI SLRMA QEGLTTEDNA+LRL+ELEALDEKRLEAQ
Subjt:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ

TYK05704.1 uncharacterized protein E5676_scaffold98G001850 [Cucumis melo var. makuwa]1.8e-30988.85Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTL+GAELNYS IEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLVEK DPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQ L DFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        V IVFISP+K+MLPYSFTL ELCS+NVVEYQ LIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDSVILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------
        KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVI VYVIDEEDWHQPIIDYL+HGKLPTGPRHRAEIR                       
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------

Query:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILF
            KEESTKAL+EAHS                   ATRAAP DNSFMSFEAWGLDLV PIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILF
Subjt:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILF

Query:  RHTSFTDMYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDN
        RHTSFTDMYKSSMYN  ANGLVEAFNKTLCSLLKKVVSKAK+DWQEKIGEALWAYRTTHRT  GVTPYSLVYGVEVVLSLEREI SLRMAFQEGLTTEDN
Subjt:  RHTSFTDMYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDN

Query:  AKLRLQELEALDEKRLEAQ
        AKLRLQELEALDEKRLEAQ
Subjt:  AKLRLQELEALDEKRLEAQ

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]2.2e-29178.5Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTL+GAELNYSPIEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLV K DPVKYILSRPVIS  LAK AIILQQYDI+YIPQKAVKGQ L DFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        V IVFISPEK+MLPYSFTLGELCS+NV EYQA IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDS+ILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------
        KADALANL TALTVSEDIPINISLCQKWIVPSIESQYEEADVISVY IDEEDW QPIIDYLEHGKLPT PRHRAEIR                       
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------

Query:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS
            KEESTKALEEAHSGICG HQSG KLQYQLKRM                   A  F  +F+               FEAWGLDLV PI PKS  GHS
Subjt:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS

Query:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA
        YILAGTDYFSKWAE VPLREAKKENIV      I++R    H   TD                     +KSSMYN  ANGL EAFNKTLCSLLKKVVSK 
Subjt:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA

Query:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
        KRDWQEKIGEALWAYRTTHRT TGVTPYSLVYGVE VL LEREI SLRMA QEGLTTEDNA+LRLQELEALDEKRLEAQ
Subjt:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ

XP_008463592.1 PREDICTED: uncharacterized protein LOC103501702 [Cucumis melo]0.0e+0099.83Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        VSIVFISPEKYMLPYSFTLGELCS+NVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIRKEESTKALEEAHSGICGVHQSGL
        KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIRKEESTKALEEAHSGICGVHQSGL
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIRKEESTKALEEAHSGICGVHQSGL

Query:  KLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILFRHTSFTDMYKSSMYNVTANGLVEAFNK
        KLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILFRHTSFTDMYKSSMYNVTANGLVEAFNK
Subjt:  KLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILFRHTSFTDMYKSSMYNVTANGLVEAFNK

Query:  TLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
        TLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
Subjt:  TLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ

TrEMBL top hitse value%identityAlignment
A0A1S3CJM2 uncharacterized protein LOC1035017020.0e+0099.83Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        VSIVFISPEKYMLPYSFTLGELCS+NVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIRKEESTKALEEAHSGICGVHQSGL
        KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIRKEESTKALEEAHSGICGVHQSGL
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIRKEESTKALEEAHSGICGVHQSGL

Query:  KLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILFRHTSFTDMYKSSMYNVTANGLVEAFNK
        KLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILFRHTSFTDMYKSSMYNVTANGLVEAFNK
Subjt:  KLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILFRHTSFTDMYKSSMYNVTANGLVEAFNK

Query:  TLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
        TLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
Subjt:  TLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ

A0A5A7SKZ3 Ribonuclease H2.4e-29178.35Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTL+GAELNYSPIEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLV K DPVKYILSRPVIS  LAK AIILQQYDI+YIPQKAVKGQ L DFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        V IVFISPEK+MLPYSFTLGELCS+NV EYQA IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDS+ILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------
        KADALANL TALTVSEDIPINISLCQKWIVPSIESQYEEADVISVY IDEEDW QPIIDYLEHGKLPT PRHRAEIR                       
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------

Query:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS
            KEESTKALEEAHSGICG HQSG KLQYQLKRM                   A  F  +F+               FEAWGLDLV PI PKS  GHS
Subjt:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS

Query:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA
        YILAGTDYFSKWAE VPLREAKKENIV      I++R    H   TD                     +KSSMYN  ANGL EAFNKTLCSLLKKVVSK 
Subjt:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA

Query:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
        KRDWQEKIGEALWAYRTTHRT TGVTPYSLVYGVE VL LEREI SLRMA QEGLTTEDNA+LRL+ELEALDEKRLEAQ
Subjt:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ

A0A5A7TZU9 Ribonuclease H2.4e-29178.35Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTL+GAELNYSPIEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLV K DPVKYILSRPVIS  LAK AIILQQYDI+YIPQKAVKGQ L DFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        V IVFISPEK+MLPYSFTLGELCS+NV EYQA IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDS+ILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------
        KADALANL TALTVSEDIPINISLCQKWIVPSIESQYEEADVISVY IDEEDW QPIIDYLEHGKLPT PRHRAEIR                       
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------

Query:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS
            KEESTKALEEAHSGICG HQSG KLQYQLKRM                   A  F  +F+               FEAWGLDLV PI PKS  GHS
Subjt:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS

Query:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA
        YILAGTDYFSKWAE VPLREAKKENIV      I++R    H   TD                     +KSSMYN  ANGL EAFNKTLCSLLKKVVSK 
Subjt:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA

Query:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
        KRDWQEKIGEALWAYRTTHRT TGVTPYSLVYGVE VL LEREI SLRMA QEGLTTEDNA+LRL+ELEALDEKRLEAQ
Subjt:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ

A0A5D3C323 RNase H domain-containing protein8.8e-31088.85Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTL+GAELNYS IEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLVEK DPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQ L DFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        V IVFISP+K+MLPYSFTL ELCS+NVVEYQ LIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA+RLMDRFDSVILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------
        KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVI VYVIDEEDWHQPIIDYL+HGKLPTGPRHRAEIR                       
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------

Query:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILF
            KEESTKAL+EAHS                   ATRAAP DNSFMSFEAWGLDLV PIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILF
Subjt:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLVGHSYILAGTDYFSKWAEVVPLREAKKENIVILF

Query:  RHTSFTDMYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDN
        RHTSFTDMYKSSMYN  ANGLVEAFNKTLCSLLKKVVSKAK+DWQEKIGEALWAYRTTHRT  GVTPYSLVYGVEVVLSLEREI SLRMAFQEGLTTEDN
Subjt:  RHTSFTDMYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDN

Query:  AKLRLQELEALDEKRLEAQ
        AKLRLQELEALDEKRLEAQ
Subjt:  AKLRLQELEALDEKRLEAQ

A0A5D3D1E5 Ribonuclease H1.1e-29178.5Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPA GKPLILYIAAQETSLGAL+AQENDKGKECALYYL+RTL+GAELNYSPIEKMCLALFFAIDKLRHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG
        MQAFTIHLV K DPVKYILSRPVIS  LAK AIILQQYDI+YIPQKAVKGQ L DFLADHPVPSNWKLCDDLPDEEVLFVESMEPW MFFDGA RRSGAG
Subjt:  MQAFTIHLVEKTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAG

Query:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK
        V IVFISPEK+MLPYSFTLGELCS+NV EYQA IIGLQMASEFGIK IEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDS+ILEHIPRSENK
Subjt:  VSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENK

Query:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------
        KADALANL TALTVSEDIPINISLCQKWIVPSIESQYEEADVISVY IDEEDW QPIIDYLEHGKLPT PRHRAEIR                       
Subjt:  KADALANLTTALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIR-----------------------

Query:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS
            KEESTKALEEAHSGICG HQSG KLQYQLKRM                   A  F  +F+               FEAWGLDLV PI PKS  GHS
Subjt:  ----KEESTKALEEAHSGICGVHQSGLKLQYQLKRMA----------------TRAAPFDNSFM--------------SFEAWGLDLVEPIMPKSLVGHS

Query:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA
        YILAGTDYFSKWAE VPLREAKKENIV      I++R    H   TD                     +KSSMYN  ANGL EAFNKTLCSLLKKVVSK 
Subjt:  YILAGTDYFSKWAEVVPLREAKKENIV------ILFR----HTSFTD--------------------MYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKA

Query:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ
        KRDWQEKIGEALWAYRTTHRT TGVTPYSLVYGVE VL LEREI SLRMA QEGLTTEDNA+LRLQELEALDEKRLEAQ
Subjt:  KRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVVLSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ

SwissProt top hitse value%identityAlignment
P0CT41 Transposon Tf2-12 polyprotein2.4e-0925.79Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        ++KD  + W  +   A ++IK+ L++PPVL      K ++L   A + ++GA+++Q++D  K   + Y +  +S A+LNYS  +K  LA+  ++   RHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESM
        +++ TI   +     + ++ R        ++ LA+  + LQ   ++I Y P  A      +  + D   P    +  D  D  + FV  +
Subjt:  MQAFTIHLVEKTDPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESM

P10394 Retrovirus-related Pol polyprotein from transposon 4124.8e-1030Show/hide
Query:  RKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHYM
        +K+  F+W   CQ AF  +K  L+NP +L  P   K   +   A + + GA++ Q N  G +  + Y +R  +  E N S  E+   A+ +AI   R Y+
Subjt:  RKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHYM

Query:  QAFTIHLVEKTD--PVKYILSRPVISRHLAKLAIILQQYD
          +  H   KTD  P+ Y+ S    S  L ++ + L++Y+
Subjt:  QAFTIHLVEKTD--PVKYILSRPVISRHLAKLAIILQQYD

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus3.6e-1029.08Show/hide
Query:  DQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHYMQ-AFTIHL
        D++   +F+ +K  L +  +L+ P   KP  L   A   ++GA+++Q+ D+G++  + Y++R+L+  E NY+ IEK  LA+ +++D LR Y+  A TI +
Subjt:  DQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHYMQ-AFTIHL

Query:  VEKTDPVKYILSRPVISRHLAKLAIILQQY--DIIYIPQKA
             P+ + L     +  L +    +++Y  ++IY P K+
Subjt:  VEKTDPVKYILSRPVISRHLAKLAIILQQY--DIIYIPQKA

Q9HSF6 Ribonuclease HI3.0e-1236.36Show/hide
Query:  FFDGATRRS--GAGVSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRF
        +FDGA+R +   A V  V +S +  ++          ++N  EY ALI  L+ A++FG   IE+ GDS+L+  QL+  ++    DL+     AR L+  F
Subjt:  FFDGATRRS--GAGVSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRF

Query:  DSVILEHIPRSENKKADALAN
        D   + H+PR+ N++ADALAN
Subjt:  DSVILEHIPRSENKKADALAN

Q9UR07 Transposon Tf2-11 polyprotein2.4e-0925.79Show/hide
Query:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY
        ++KD  + W  +   A ++IK+ L++PPVL      K ++L   A + ++GA+++Q++D  K   + Y +  +S A+LNYS  +K  LA+  ++   RHY
Subjt:  MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHY

Query:  MQAFTIHLVEKTDPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESM
        +++ TI   +     + ++ R        ++ LA+  + LQ   ++I Y P  A      +  + D   P    +  D  D  + FV  +
Subjt:  MQAFTIHLVEKTDPVKYILSR-----PVISRHLAKLAIILQ--QYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESM

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein1.5e-1134.31Show/hide
Query:  SMEPWFMFFDGATR-RSGAGVSIVFISPEKYMLPYSFTLG-ELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA
        S E  F+ FDGA++   G   +   +  E   L      G  + ++N  EY ALI+GL+ A E G K I++ GDSKL+  Q+  Q++V H+ L      A
Subjt:  SMEPWFMFFDGATR-RSGAGVSIVFISPEKYMLPYSFTLG-ELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYA

Query:  RRLMDRFDSVILEHIPRSENKKADALANLTTALTVSE
        + L ++  S  + H+ R+ N  AD  ANL   L   E
Subjt:  RRLMDRFDSVILEHIPRSENKKADALANLTTALTVSE

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.4e-1131.67Show/hide
Query:  FDGATRRS--GAGVSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFD
        FDGA++ +   AG   V  + +  +L Y        ++NV EY+AL++GL+ A + G K + + GDS L+  Q+   ++  H  +      A+ LM+ F 
Subjt:  FDGATRRS--GAGVSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFD

Query:  SVILEHIPRSENKKADALAN
        +  ++HI R +N +AD  AN
Subjt:  SVILEHIPRSENKKADALAN

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.4e-1131.67Show/hide
Query:  FDGATRRS--GAGVSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFD
        FDGA++ +   AG   V  + +  +L Y        ++NV EY+AL++GL+ A + G K + + GDS L+  Q+   ++  H  +      A+ LM+ F 
Subjt:  FDGATRRS--GAGVSIVFISPEKYMLPYSFTLGELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFD

Query:  SVILEHIPRSENKKADALAN
        +  ++HI R +N +AD  AN
Subjt:  SVILEHIPRSENKKADALAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGGATGCAGTCTTTGATTGGGACCAGTCATGCCAAAATGCATTTGATAGCATAAAGAAGTATCTGCTCAACCCTCCAGTCTTAAGTGCGCCTGCAGCTGGAAA
ACCATTAATATTGTATATTGCGGCTCAAGAGACTTCGCTTGGGGCATTAATTGCACAAGAAAATGATAAGGGTAAGGAATGTGCACTCTACTATCTAACTAGAACTCTGT
CAGGAGCTGAATTAAATTATTCTCCAATTGAGAAAATGTGTCTCGCCCTCTTCTTTGCAATAGATAAACTGAGACATTATATGCAAGCCTTCACTATACATTTGGTGGAA
AAAACTGATCCTGTCAAATATATCTTATCAAGGCCAGTCATCTCGAGACACCTCGCGAAGTTGGCTATTATACTCCAACAATATGATATTATATATATCCCCCAAAAAGC
AGTGAAGGGCCAAACATTGGTAGATTTCCTGGCTGATCATCCAGTTCCATCAAATTGGAAATTATGTGACGACTTACCTGATGAGGAAGTATTGTTTGTTGAAAGCATGG
AGCCTTGGTTCATGTTCTTTGATGGTGCGACACGAAGAAGTGGAGCTGGTGTCAGCATTGTTTTCATTTCTCCTGAGAAATATATGTTGCCATATAGCTTCACACTCGGT
GAGTTGTGTTCAGATAATGTTGTTGAGTACCAAGCCCTAATCATCGGCCTCCAAATGGCTTCAGAATTTGGGATAAAGTACATAGAAATATTCGGCGATTCAAAGTTAAT
CATAAATCAGCTCTCTTATCAGTACGAGGTAAAGCATCAAGACTTGAAGCCCTACTTTAGTTATGCTAGAAGATTGATGGACAGATTCGACAGCGTAATATTGGAGCATA
TACCGAGATCAGAAAATAAGAAAGCTGATGCACTTGCAAATTTGACCACTGCTTTAACAGTCTCGGAAGACATACCAATAAACATTTCCCTTTGCCAAAAATGGATTGTG
CCCTCGATTGAAAGTCAATACGAAGAAGCTGATGTGATATCTGTGTATGTAATTGATGAAGAAGATTGGCACCAACCCATTATAGACTATTTGGAGCATGGAAAACTTCC
CACCGGTCCTCGACATCGAGCTGAAATACGAAAAGAGGAATCGACAAAGGCCTTAGAGGAAGCTCATTCAGGTATTTGTGGTGTCCATCAGTCTGGTCTAAAGCTTCAAT
ATCAGTTGAAAAGAATGGCCACCAGAGCTGCTCCATTCGACAATAGCTTCATGTCTTTTGAAGCTTGGGGACTCGACCTGGTTGAACCTATCATGCCTAAATCATTGGTT
GGTCATTCTTACATCCTTGCAGGAACTGATTATTTTTCTAAATGGGCTGAAGTCGTGCCATTAAGAGAAGCAAAGAAGGAAAACATTGTAATTTTGTTCAGACACACATC
ATTTACGGATATGTACAAGTCTTCTATGTACAATGTCACAGCAAATGGATTGGTAGAAGCATTCAACAAAACTTTGTGCAGCCTACTTAAAAAGGTGGTCTCCAAGGCAA
AAAGAGATTGGCAAGAAAAGATTGGGGAAGCATTGTGGGCCTACAGAACTACCCATCGTACTTCTACAGGTGTTACACCGTATTCCTTGGTTTATGGCGTTGAAGTAGTA
CTCTCACTAGAAAGAGAAATTTCTTCTTTAAGAATGGCATTTCAAGAAGGGCTAACTACTGAAGACAATGCTAAATTACGCCTTCAAGAGTTAGAAGCACTTGACGAAAA
GAGACTGGAAGCTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGGATGCAGTCTTTGATTGGGACCAGTCATGCCAAAATGCATTTGATAGCATAAAGAAGTATCTGCTCAACCCTCCAGTCTTAAGTGCGCCTGCAGCTGGAAA
ACCATTAATATTGTATATTGCGGCTCAAGAGACTTCGCTTGGGGCATTAATTGCACAAGAAAATGATAAGGGTAAGGAATGTGCACTCTACTATCTAACTAGAACTCTGT
CAGGAGCTGAATTAAATTATTCTCCAATTGAGAAAATGTGTCTCGCCCTCTTCTTTGCAATAGATAAACTGAGACATTATATGCAAGCCTTCACTATACATTTGGTGGAA
AAAACTGATCCTGTCAAATATATCTTATCAAGGCCAGTCATCTCGAGACACCTCGCGAAGTTGGCTATTATACTCCAACAATATGATATTATATATATCCCCCAAAAAGC
AGTGAAGGGCCAAACATTGGTAGATTTCCTGGCTGATCATCCAGTTCCATCAAATTGGAAATTATGTGACGACTTACCTGATGAGGAAGTATTGTTTGTTGAAAGCATGG
AGCCTTGGTTCATGTTCTTTGATGGTGCGACACGAAGAAGTGGAGCTGGTGTCAGCATTGTTTTCATTTCTCCTGAGAAATATATGTTGCCATATAGCTTCACACTCGGT
GAGTTGTGTTCAGATAATGTTGTTGAGTACCAAGCCCTAATCATCGGCCTCCAAATGGCTTCAGAATTTGGGATAAAGTACATAGAAATATTCGGCGATTCAAAGTTAAT
CATAAATCAGCTCTCTTATCAGTACGAGGTAAAGCATCAAGACTTGAAGCCCTACTTTAGTTATGCTAGAAGATTGATGGACAGATTCGACAGCGTAATATTGGAGCATA
TACCGAGATCAGAAAATAAGAAAGCTGATGCACTTGCAAATTTGACCACTGCTTTAACAGTCTCGGAAGACATACCAATAAACATTTCCCTTTGCCAAAAATGGATTGTG
CCCTCGATTGAAAGTCAATACGAAGAAGCTGATGTGATATCTGTGTATGTAATTGATGAAGAAGATTGGCACCAACCCATTATAGACTATTTGGAGCATGGAAAACTTCC
CACCGGTCCTCGACATCGAGCTGAAATACGAAAAGAGGAATCGACAAAGGCCTTAGAGGAAGCTCATTCAGGTATTTGTGGTGTCCATCAGTCTGGTCTAAAGCTTCAAT
ATCAGTTGAAAAGAATGGCCACCAGAGCTGCTCCATTCGACAATAGCTTCATGTCTTTTGAAGCTTGGGGACTCGACCTGGTTGAACCTATCATGCCTAAATCATTGGTT
GGTCATTCTTACATCCTTGCAGGAACTGATTATTTTTCTAAATGGGCTGAAGTCGTGCCATTAAGAGAAGCAAAGAAGGAAAACATTGTAATTTTGTTCAGACACACATC
ATTTACGGATATGTACAAGTCTTCTATGTACAATGTCACAGCAAATGGATTGGTAGAAGCATTCAACAAAACTTTGTGCAGCCTACTTAAAAAGGTGGTCTCCAAGGCAA
AAAGAGATTGGCAAGAAAAGATTGGGGAAGCATTGTGGGCCTACAGAACTACCCATCGTACTTCTACAGGTGTTACACCGTATTCCTTGGTTTATGGCGTTGAAGTAGTA
CTCTCACTAGAAAGAGAAATTTCTTCTTTAAGAATGGCATTTCAAGAAGGGCTAACTACTGAAGACAATGCTAAATTACGCCTTCAAGAGTTAGAAGCACTTGACGAAAA
GAGACTGGAAGCTCAATAA
Protein sequenceShow/hide protein sequence
MRKDAVFDWDQSCQNAFDSIKKYLLNPPVLSAPAAGKPLILYIAAQETSLGALIAQENDKGKECALYYLTRTLSGAELNYSPIEKMCLALFFAIDKLRHYMQAFTIHLVE
KTDPVKYILSRPVISRHLAKLAIILQQYDIIYIPQKAVKGQTLVDFLADHPVPSNWKLCDDLPDEEVLFVESMEPWFMFFDGATRRSGAGVSIVFISPEKYMLPYSFTLG
ELCSDNVVEYQALIIGLQMASEFGIKYIEIFGDSKLIINQLSYQYEVKHQDLKPYFSYARRLMDRFDSVILEHIPRSENKKADALANLTTALTVSEDIPINISLCQKWIV
PSIESQYEEADVISVYVIDEEDWHQPIIDYLEHGKLPTGPRHRAEIRKEESTKALEEAHSGICGVHQSGLKLQYQLKRMATRAAPFDNSFMSFEAWGLDLVEPIMPKSLV
GHSYILAGTDYFSKWAEVVPLREAKKENIVILFRHTSFTDMYKSSMYNVTANGLVEAFNKTLCSLLKKVVSKAKRDWQEKIGEALWAYRTTHRTSTGVTPYSLVYGVEVV
LSLEREISSLRMAFQEGLTTEDNAKLRLQELEALDEKRLEAQ