| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0056980.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.0e-66 | 36.85 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQG+ MC + +GLP +++VEDFLPLEL N+DMVLGMQWLQKQG+MTVDW+ L MTF VGD KV+LKGDPSLTRMEISLK+L+K WQP+D+G+L
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKAD----------------------------------------------------------------------------------------
V+FR+MGI KAD
Subjt: VDFRSMGISKAD----------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
S+DVE+HLEHLT+VF LLR++ LFAN +KCHF ++RIEYLGHWVS+ VEAD+EKI+ M+EWPIP+NI+ELRGFLGLT
Subjt: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
Query: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
GYYRRF KN+F W+EEAT AFEQLK AMVT
Subjt: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
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| TYK10423.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.0e-66 | 36.85 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQG+ +C + +GLP +++VEDFLPLEL N+DMVLGMQWLQKQG+MTVDW+ L MTF VGD KV+LKGDPSLTRMEISLK+L+K WQP+D+G+L
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKAD----------------------------------------------------------------------------------------
V+FR+MGI KAD
Subjt: VDFRSMGISKAD----------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
S+DVE+HLEHLT+VF LLR++ LFAN +KCHF ++RIEYLGHWVS+ VEAD+EKI+AM+EWPIP+NI+ELRGFLGLT
Subjt: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
Query: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
GYYRRF KN+F W+EEAT AFEQLK AMVT
Subjt: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
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| TYK21209.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.0e-66 | 36.85 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQG+ +C + +GLP +++VEDFLPLEL N+DMVLGMQWLQKQG+MTVDW+ L MTF VGD KV+LKGDPSLTRMEISLK+L+K WQP+D+G+L
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKAD----------------------------------------------------------------------------------------
V+FR+MGI KAD
Subjt: VDFRSMGISKAD----------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
S+DVE+HLEHLT+VF LLR++ LFAN +KCHF ++RIEYLGHWVS+ VEAD+EKI+AM+EWPIP+NI+ELRGFLGLT
Subjt: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
Query: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
GYYRRF KN+F W+EEAT AFEQLK AMVT
Subjt: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
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| TYK23724.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.0e-66 | 36.85 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQG+ +C + +GLP +++VEDFLPLEL N+DMVLGMQWLQKQG+MTVDW+ L MTF VGD KV+LKGDPSLTRMEISLK+L+K WQP+D+G+L
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKAD----------------------------------------------------------------------------------------
V+FR+MGI KAD
Subjt: VDFRSMGISKAD----------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
S+DVE+HLEHLT+VF LLR++ LFAN +KCHF ++RIEYLGHWVS+ VEAD+EKI+AM+EWPIP+NI+ELRGFLGLT
Subjt: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
Query: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
GYYRRF KN+F W+EEAT AFEQLK AMVT
Subjt: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
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| XP_016900395.1 PREDICTED: uncharacterized protein LOC107990885 [Cucumis melo] | 7.0e-121 | 92.5 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQGKRMCTRVVIGLP LTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKADSKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF----
VDFRSMGISKADSKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYY RF
Subjt: VDFRSMGISKADSKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF----
Query: ------------KNSFHWTEEATSAFEQLKSAMVTRVGFT
KNSFHWTEEATSAFEQLKSAMVTRVGFT
Subjt: ------------KNSFHWTEEATSAFEQLKSAMVTRVGFT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4DXF1 uncharacterized protein LOC107990885 | 3.4e-121 | 92.5 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQGKRMCTRVVIGLP LTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKADSKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF----
VDFRSMGISKADSKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYY RF
Subjt: VDFRSMGISKADSKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF----
Query: ------------KNSFHWTEEATSAFEQLKSAMVTRVGFT
KNSFHWTEEATSAFEQLKSAMVTRVGFT
Subjt: ------------KNSFHWTEEATSAFEQLKSAMVTRVGFT
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| A0A5A7UPE1 Ty3/gypsy retrotransposon protein | 2.4e-66 | 36.85 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQG+ MC + +GLP +++VEDFLPLEL N+DMVLGMQWLQKQG+MTVDW+ L MTF VGD KV+LKGDPSLTRMEISLK+L+K WQP+D+G+L
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKAD----------------------------------------------------------------------------------------
V+FR+MGI KAD
Subjt: VDFRSMGISKAD----------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
S+DVE+HLEHLT+VF LLR++ LFAN +KCHF ++RIEYLGHWVS+ VEAD+EKI+ M+EWPIP+NI+ELRGFLGLT
Subjt: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
Query: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
GYYRRF KN+F W+EEAT AFEQLK AMVT
Subjt: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
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| A0A5D3BD16 Ty3/gypsy retrotransposon protein | 2.4e-66 | 36.85 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQG+ +C + +GLP +++VEDFLPLEL N+DMVLGMQWLQKQG+MTVDW+ L MTF VGD KV+LKGDPSLTRMEISLK+L+K WQP+D+G+L
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKAD----------------------------------------------------------------------------------------
V+FR+MGI KAD
Subjt: VDFRSMGISKAD----------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
S+DVE+HLEHLT+VF LLR++ LFAN +KCHF ++RIEYLGHWVS+ VEAD+EKI+AM+EWPIP+NI+ELRGFLGLT
Subjt: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
Query: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
GYYRRF KN+F W+EEAT AFEQLK AMVT
Subjt: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
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| A0A5D3CEX8 Ty3/gypsy retrotransposon protein | 2.4e-66 | 36.85 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQG+ +C + +GLP +++VEDFLPLEL N+DMVLGMQWLQKQG+MTVDW+ L MTF VGD KV+LKGDPSLTRMEISLK+L+K WQP+D+G+L
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKAD----------------------------------------------------------------------------------------
V+FR+MGI KAD
Subjt: VDFRSMGISKAD----------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
S+DVE+HLEHLT+VF LLR++ LFAN +KCHF ++RIEYLGHWVS+ VEAD+EKI+AM+EWPIP+NI+ELRGFLGLT
Subjt: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
Query: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
GYYRRF KN+F W+EEAT AFEQLK AMVT
Subjt: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
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| A0A5D3DRT3 Ty3/gypsy retrotransposon protein | 2.4e-66 | 36.85 | Show/hide |
Query: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
MGSGKAVQG+ +C + +GLP +++VEDFLPLEL N+DMVLGMQWLQKQG+MTVDW+ L MTF VGD KV+LKGDPSLTRMEISLK+L+K WQP+D+G+L
Subjt: MGSGKAVQGKRMCTRVVIGLPGLTVVEDFLPLELENLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLTRMEISLKMLMKQWQPNDRGYL
Query: VDFRSMGISKAD----------------------------------------------------------------------------------------
V+FR+MGI KAD
Subjt: VDFRSMGISKAD----------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
S+DVE+HLEHLT+VF LLR++ LFAN +KCHF ++RIEYLGHWVS+ VEAD+EKI+AM+EWPIP+NI+ELRGFLGLT
Subjt: ----------------------SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLT
Query: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
GYYRRF KN+F W+EEAT AFEQLK AMVT
Subjt: GYYRRF----------------KNSFHWTEEATSAFEQLKSAMVT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.3e-12 | 38.64 | Show/hide |
Query: SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRFKNSF
S ++ HL+ L +VF L + +L KC F ++ +LGH ++ + ++ + EKI A+ ++PIP KE++ FLGLTGYYR+F +F
Subjt: SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRFKNSF
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.3e-12 | 39.29 | Show/hide |
Query: SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF
S + HL + +VFT L + +L KC F ++ +LGH V+ + ++ + K++A++ +PIP KE+R FLGLTGYYR+F
Subjt: SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF
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| P92523 Uncharacterized mitochondrial protein AtMg00860 | 1.5e-20 | 45.76 | Show/hide |
Query: LEHLTIVFTLLREYSLFANWKKCHFGRERIEYLG--HWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF----------------KNSFH
+ HL +V + ++ +AN KKC FG+ +I YLG H +S V AD K+ AM+ WP P+N ELRGFLGLTGYYRRF KNS
Subjt: LEHLTIVFTLLREYSLFANWKKCHFGRERIEYLG--HWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF----------------KNSFH
Query: WTEEATSAFEQLKSAMVT
WTE A AF+ LK A+ T
Subjt: WTEEATSAFEQLKSAMVT
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 9.5e-12 | 30.83 | Show/hide |
Query: SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF---------------K
S+ E H +HL V L+ +L KKC F E E+LG+ + ++ + K A+ ++P P+ +K+ + FLG+ YYRRF
Subjt: SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF---------------K
Query: NSFHWTEEATSAFEQLKSAM
+ WTE+ A E+LK+A+
Subjt: NSFHWTEEATSAFEQLKSAM
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.7e-13 | 34.19 | Show/hide |
Query: SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF-----KNSFHWTEEAT
S+D ++H ++L +V L + +L N +K HF ++E+LG+ V+++ ++AD +K+RA+ E P P ++KEL+ FLG+T YYR+F K + T
Subjt: SKDVESHLEHLTIVFTLLREYSLFANWKKCHFGRERIEYLGHWVSSNRVEADREKIRAMLEWPIPRNIKELRGFLGLTGYYRRF-----KNSFHWTEEAT
Query: SAFEQLKSAMVTRVGFT
+ +KS+ ++V T
Subjt: SAFEQLKSAMVTRVGFT
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