| GenBank top hits | e value | %identity | Alignment |
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| AAO45752.1 pol protein [Cucumis melo subsp. melo] | 3.0e-82 | 86.46 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSKTEA HE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFS IATPLTQL+RKGAP FVWSKA CE SFQ LKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| KAA0045479.1 pol protein [Cucumis melo var. makuwa] | 3.0e-82 | 86.46 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSKTEA HEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFS IATPLTQL+RKGAP FVWSKA CE SFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 8.7e-82 | 85.94 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSKTEA HE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFS IATPLTQL+RKGAP FVWSKA CE SFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| KAA0056200.1 pol protein [Cucumis melo var. makuwa] | 1.1e-81 | 84.9 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSK EA HE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFSCIATPLTQL+RKGAP +VWSKA CE SFQ LKQKLVT PVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 1.1e-81 | 85.94 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSKTEA HE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFS IATPLTQL+RKGAP FVWSKA CE SFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7TW75 Pol protein | 1.4e-82 | 86.46 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSKTEA HEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFS IATPLTQL+RKGAP FVWSKA CE SFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| A0A5A7U330 Reverse transcriptase | 4.2e-82 | 85.94 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSKTEA HE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFS IATPLTQL+RKGAP FVWSKA CE SFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| A0A5A7UM36 Reverse transcriptase | 5.5e-82 | 84.9 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSK EA HE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFSCIATPLTQL+RKGAP +VWSKA CE SFQ LKQKLVT PVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| A0A5D3BPI1 Reverse transcriptase | 5.5e-82 | 85.94 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSKTEA HE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFS IATPLTQL+RKGAP FVWSKA CE SFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| Q84KB0 Pol protein | 1.4e-82 | 86.46 | Show/hide |
Query: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
MDLMN+VFREFLDTFVIVFIDDILIYSKTEA HE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA++
Subjt: MDLMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS--------------
Query: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GLAGYYRRFVENFS IATPLTQL+RKGAP FVWSKA CE SFQ LKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
Subjt: -GLAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 7.0e-26 | 33.86 | Show/hide |
Query: MNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS---------------GL
MN + R L+ +V++DDI+++S + H + L +V + L L + KCEF ++ +FLGHV++ G+ +P KIEA+ GL
Subjt: MNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS---------------GL
Query: AGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GYYR+F+ NF+ IA P+T+ +K + + +F++LK + P+L VPD + F + +DAS LG VL Q G ++Y SR
Subjt: AGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.4e-18 | 30.41 | Show/hide |
Query: LMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS---------------G
+M F + +++DD+++ +E K+L V R+ L KC F++ +V+FLGH + G+ D K + +
Subjt: LMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS---------------G
Query: LAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK----VVAYASR
YYRRF++NF+ + +T+L +K P F W+ C+++F LK +L+ +L PD S F I +DASK+ G VL Q VAYASR
Subjt: LAGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK----VVAYASR
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 1.2e-20 | 31.66 | Show/hide |
Query: MNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS---------------GL
++ V RE + V++DD++I+S+ E+ H +H+ VL+ L D + K F+ + V +LG +VSK G DP K++A+ GL
Subjt: MNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS---------------GL
Query: AGYYRRFVENFSCIATPLTQL--SRKGAPFFVWSK-------ASCERSFQELKQKLVTAPV-LTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
A YYR F+++F+ IA P+T + G+ SK + +FQ L+ L + V L PD F + +DAS G+G VL Q+G+ + SR
Subjt: AGYYRRFVENFSCIATPLTQL--SRKGAPFFVWSK-------ASCERSFQELKQKLVTAPV-LTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.1e-26 | 33.33 | Show/hide |
Query: MNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAL---------------SGL
MN + R L+ +V++DDI+I+S + H +++V L D L + KCEF K+ +FLGH+V+ G+ +P K++A+ GL
Subjt: MNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAL---------------SGL
Query: AGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
GYYR+F+ N++ IA P+T +K K +F++LK ++ P+L +PD FV+ +DAS LG VL Q G +++ SR
Subjt: AGYYRRFVENFSCIATPLTQLSRKGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 3.4e-20 | 29.56 | Show/hide |
Query: LMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS---------------G
+++ + RE + V+IDDI+++S+ H K+LR+VL +L L K F QV FLG++V+ G+ DP K+ A+S G
Subjt: LMNKVFREFLDTFVIVFIDDILIYSKTEARHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALS---------------G
Query: LAGYYRRFVENFSCIATPLTQLSR---------KGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ----QGKVVAY
+ YYR+F+++++ +A PLT L+R + + + + +SF +LK L ++ +L P + F + +DAS +G VL Q + + +AY
Subjt: LAGYYRRFVENFSCIATPLTQLSR---------KGAPFFVWSKASCERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ----QGKVVAY
Query: ASR
SR
Subjt: ASR
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