; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0003941 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0003941
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr07:16702345..16703940
RNA-Seq ExpressionPay0003941
SyntenyPay0003941
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-15262.18Show/hide
Query:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------
        MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ                                                  
Subjt:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------

Query:  --------------------------------------------------------------------------------------------DDIIVTGL
                                                                                                    DDIIVTGL
Subjt:  --------------------------------------------------------------------------------------------DDIIVTGL

Query:  DYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP
        DYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP
Subjt:  DYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP

Query:  DIALSVNRVT------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSL
        DIALSVNRV+                                                DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSL
Subjt:  DIALSVNRVT------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSL

Query:  ATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQ
        ATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQ
Subjt:  ATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQ

Query:  PESSV
        PESSV
Subjt:  PESSV

KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.4e-12961.99Show/hide
Query:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------
        MQTRAKS IFKPKAFHITTALPTPTSYTEASKYPEWRT MHEEFNALQAQ                                                  
Subjt:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------

Query:  ----------------------------------------------------------------------DDIIVTGLDYLYIFVLKNQLALEFKISNLG
                                                                              DDIIVTG DYLYI  LKNQLALEFKIS+LG
Subjt:  ----------------------------------------------------------------------DDIIVTGLDYLYIFVLKNQLALEFKISNLG

Query:  PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIA--LSVNRVT-----DTSDR
        PLKYFLGLEIQSSIDGI VNQA+YLNDLLHTSGMTSAKSCITP+STSLDLYTIAPPFNDP LYRRL          +P +    +V R+      DTSDR
Subjt:  PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIA--LSVNRVT-----DTSDR

Query:  RSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLC
        RSTSGFIAFL SNPISWSSKKQS +SRSSTEAEY SLATTTADLYWIRQLL DLHVPLKTSP LWCDN+SAISLAHNPVFHARTKHIEIDYHFV EKVL 
Subjt:  RSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLC

Query:  KDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        KDISI YI SNNQLADILTKPLLSPTFLHLRDKLLTQPESS+
Subjt:  KDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

KAA0065957.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-12575.6Show/hide
Query:  SDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLN
        S + K    HI  AL        A++Y  W     +  N     DDIIVTG DYLYI VLKNQLAL+FKIS+LGPLKYFLGL+IQSSIDGIFVNQAKYLN
Subjt:  SDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLN

Query:  DLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVT-----------------------DTSDRRSTSGFIAFL
        DLLHT  MTS KSCIT MSTSLDLYTI PPFNDP LYRRLVGSLQYLTFTRPDIA SVNRV+                       DTSDRRSTSGFIAFL
Subjt:  DLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVT-----------------------DTSDRRSTSGFIAFL

Query:  GSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYS
        GSNPISWSSKKQS VS SSTEAEYCSLATTTA+LYWIRQLLCDLHV LKTSPTLWCDNVSAISLAHNPVFHARTKHIEI YHFV EKVLCKDI I YI S
Subjt:  GSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYS

Query:  NNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        NNQLADILTKPLLSP FLH RDKLLTQPESSV
Subjt:  NNQLADILTKPLLSPTFLHLRDKLLTQPESSV

TYK08058.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.2e-12768.95Show/hide
Query:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------DDIIVTGLDYLYIF-------VLKNQLALEFK---------
        MQTRAKS IFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ           + V G  +++         +  ++  L  K         
Subjt:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------DDIIVTGLDYLYIF-------VLKNQLALEFK---------

Query:  --------------ISNLGPLKYFLGLE---IQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP
                      +S L    Y L      IQSSIDGIF NQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDP LYRRLVGSLQYLTFTRP
Subjt:  --------------ISNLGPLKYFLGLE---IQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP

Query:  DIALSVNRVT-----------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSP
        DIA SVNRV+                       DTSD+RSTSGFIAFL SNPISWSSKKQ  VSRSSTEAEY SLATTT DLYWI+QLLCDLHVPLKTS 
Subjt:  DIALSVNRVT-----------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSP

Query:  TLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        TLWCDNV AISLAHNPVFHARTKHIEIDYHFV EKV+ KDI I Y+ SNNQLADILTKPLL PTFLHLRDKLLTQPESSV
Subjt:  TLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

XP_016901398.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]6.0e-13485.62Show/hide
Query:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVN
        MQTRAKS IFKP AFHITTALPTPTSYTEASKYPEWRT MHEEFN LQAQDDIIVTG  Y YI +LKNQLALEFKIS+L PLKYFLGLEIQSSIDGIFVN
Subjt:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVN

Query:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVTDTSDRRSTSGFIAFLGSNPISWSSKKQSIVSR
        QAKYLNDLLHTSGMTS KSCITPMSTSLDLYTIAPPFNDP LY RLVGSLQYLTFTRPDI  SVNRV    D    +GFIAFL SNPISWSSKKQS VS 
Subjt:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVTDTSDRRSTSGFIAFLGSNPISWSSKKQSIVSR

Query:  SSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILT
        SSTE EY SLATTT+DLYWIRQLLCDLHVPLKTSPTLWCDNVSAISL HNP+FHARTKHIEIDYHFV +KVL KDISI YI SNN+L DI +
Subjt:  SSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILT

TrEMBL top hitse value%identityAlignment
A0A1S4DZJ0 uncharacterized mitochondrial protein AtMg00810-like2.9e-13485.62Show/hide
Query:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVN
        MQTRAKS IFKP AFHITTALPTPTSYTEASKYPEWRT MHEEFN LQAQDDIIVTG  Y YI +LKNQLALEFKIS+L PLKYFLGLEIQSSIDGIFVN
Subjt:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVN

Query:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVTDTSDRRSTSGFIAFLGSNPISWSSKKQSIVSR
        QAKYLNDLLHTSGMTS KSCITPMSTSLDLYTIAPPFNDP LY RLVGSLQYLTFTRPDI  SVNRV    D    +GFIAFL SNPISWSSKKQS VS 
Subjt:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVTDTSDRRSTSGFIAFLGSNPISWSSKKQSIVSR

Query:  SSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILT
        SSTE EY SLATTT+DLYWIRQLLCDLHVPLKTSPTLWCDNVSAISL HNP+FHARTKHIEIDYHFV +KVL KDISI YI SNN+L DI +
Subjt:  SSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILT

A0A5A7TPR4 Putative mitochondrial protein6.2e-15362.18Show/hide
Query:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------
        MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ                                                  
Subjt:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------

Query:  --------------------------------------------------------------------------------------------DDIIVTGL
                                                                                                    DDIIVTGL
Subjt:  --------------------------------------------------------------------------------------------DDIIVTGL

Query:  DYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP
        DYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP
Subjt:  DYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP

Query:  DIALSVNRVT------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSL
        DIALSVNRV+                                                DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSL
Subjt:  DIALSVNRVT------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSL

Query:  ATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQ
        ATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQ
Subjt:  ATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQ

Query:  PESSV
        PESSV
Subjt:  PESSV

A0A5A7UZE5 Putative mitochondrial protein1.6e-12961.99Show/hide
Query:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------
        MQTRAKS IFKPKAFHITTALPTPTSYTEASKYPEWRT MHEEFNALQAQ                                                  
Subjt:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------

Query:  ----------------------------------------------------------------------DDIIVTGLDYLYIFVLKNQLALEFKISNLG
                                                                              DDIIVTG DYLYI  LKNQLALEFKIS+LG
Subjt:  ----------------------------------------------------------------------DDIIVTGLDYLYIFVLKNQLALEFKISNLG

Query:  PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIA--LSVNRVT-----DTSDR
        PLKYFLGLEIQSSIDGI VNQA+YLNDLLHTSGMTSAKSCITP+STSLDLYTIAPPFNDP LYRRL          +P +    +V R+      DTSDR
Subjt:  PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIA--LSVNRVT-----DTSDR

Query:  RSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLC
        RSTSGFIAFL SNPISWSSKKQS +SRSSTEAEY SLATTTADLYWIRQLL DLHVPLKTSP LWCDN+SAISLAHNPVFHARTKHIEIDYHFV EKVL 
Subjt:  RSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLC

Query:  KDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        KDISI YI SNNQLADILTKPLLSPTFLHLRDKLLTQPESS+
Subjt:  KDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

A0A5A7VFU7 Putative mitochondrial protein1.1e-12575.6Show/hide
Query:  SDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLN
        S + K    HI  AL        A++Y  W     +  N     DDIIVTG DYLYI VLKNQLAL+FKIS+LGPLKYFLGL+IQSSIDGIFVNQAKYLN
Subjt:  SDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLN

Query:  DLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVT-----------------------DTSDRRSTSGFIAFL
        DLLHT  MTS KSCIT MSTSLDLYTI PPFNDP LYRRLVGSLQYLTFTRPDIA SVNRV+                       DTSDRRSTSGFIAFL
Subjt:  DLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVT-----------------------DTSDRRSTSGFIAFL

Query:  GSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYS
        GSNPISWSSKKQS VS SSTEAEYCSLATTTA+LYWIRQLLCDLHV LKTSPTLWCDNVSAISLAHNPVFHARTKHIEI YHFV EKVLCKDI I YI S
Subjt:  GSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYS

Query:  NNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        NNQLADILTKPLLSP FLH RDKLLTQPESSV
Subjt:  NNQLADILTKPLLSPTFLHLRDKLLTQPESSV

A0A5D3CA49 Putative mitochondrial protein1.5e-12768.95Show/hide
Query:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------DDIIVTGLDYLYIF-------VLKNQLALEFK---------
        MQTRAKS IFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ           + V G  +++         +  ++  L  K         
Subjt:  MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------DDIIVTGLDYLYIF-------VLKNQLALEFK---------

Query:  --------------ISNLGPLKYFLGLE---IQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP
                      +S L    Y L      IQSSIDGIF NQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDP LYRRLVGSLQYLTFTRP
Subjt:  --------------ISNLGPLKYFLGLE---IQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP

Query:  DIALSVNRVT-----------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSP
        DIA SVNRV+                       DTSD+RSTSGFIAFL SNPISWSSKKQ  VSRSSTEAEY SLATTT DLYWI+QLLCDLHVPLKTS 
Subjt:  DIALSVNRVT-----------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSP

Query:  TLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        TLWCDNV AISLAHNPVFHARTKHIEIDYHFV EKV+ KDI I Y+ SNNQLADILTKPLL PTFLHLRDKLLTQPESSV
Subjt:  TLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.1e-3229.18Show/hide
Query:  MHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFND
        ++E    L   DD+++   D   +   K  L  +F++++L  +K+F+G+ I+   D I+++Q+ Y+  +L    M +  +  TP+ + ++   +    + 
Subjt:  MHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFND

Query:  PLLYRRLVGSLQYLTF-TRPDIALSVNRVTDTS---------------------------------------------------DRRSTSGFI-AFLGSN
            R L+G L Y+   TRPD+  +VN ++  S                                                   DR+ST+G++      N
Subjt:  PLLYRRLVGSLQYLTF-TRPDIALSVNRVTDTS---------------------------------------------------DRRSTSGFI-AFLGSN

Query:  PISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQ
         I W++K+Q+ V+ SSTEAEY +L     +  W++ LL  +++ L+    ++ DN   IS+A+NP  H R KHI+I YHF  E+V    I + YI + NQ
Subjt:  PISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQ

Query:  LADILTKPLLSPTFLHLRDKL-LTQPESS
        LADI TKPL +  F+ LRDKL L Q + S
Subjt:  LADILTKPLLSPTFLHLRDKL-LTQPESS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-2629.57Show/hide
Query:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEI--QSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDL------YTIAPPFN-DPL
        DD+++ G D   I  LK  L+  F + +LGP +  LG++I  + +   ++++Q KY+  +L    M +AK   TP++  L L       T+    N   +
Subjt:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEI--QSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDL------YTIAPPFN-DPL

Query:  LYRRLVGSLQY-LTFTRPDIALSVNRVT------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSS
         Y   VGSL Y +  TRPDIA +V  V+                                                D  +R+S++G++       ISW S
Subjt:  LYRRLVGSLQY-LTFTRPDIALSVNRVT------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSS

Query:  KKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILT
        K Q  V+ S+TEAEY +   T  ++ W+++ L +L +  K    ++CD+ SAI L+ N ++HARTKHI++ YH++ E V  + + +  I +N   AD+LT
Subjt:  KKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILT

Query:  K
        K
Subjt:  K

P92519 Uncharacterized mitochondrial protein AtMg008101.9e-2936.7Show/hide
Query:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSL
        DDI++TG     + +L  QL+  F + +LGP+ YFLG++I++   G+F++Q KY   +L+ +GM   K   TP+   L+       + DP  +R +VG+L
Subjt:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSL

Query:  QYLTFTRPDIALSVNRVTD-------------------------------------------------TSDRRSTSGFIAFLGSNPISWSSKKQSIVSRS
        QYLT TRPDI+ +VN V                                                   TS RRST+GF  FLG N ISWS+K+Q  VSRS
Subjt:  QYLTFTRPDIALSVNRVTD-------------------------------------------------TSDRRSTSGFIAFLGSNPISWSSKKQSIVSRS

Query:  STEAEYCSLATTTADLYW
        STE EY +LA T A+L W
Subjt:  STEAEYCSLATTTADLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.8e-4938.31Show/hide
Query:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPPFNDPLLYRRLVG
        DDI++TG D   +    + L+  F + +   L YFLG+E +    G+ ++Q +Y+ DLL  + M +AK   TPM+ S  L LY+      DP  YR +VG
Subjt:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPPFNDPLLYRRLVG

Query:  SLQYLTFTRPDIALSVNRVT-------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVS
        SLQYL FTRPDI+ +VNR++                                                 D  D  ST+G+I +LG +PISWSSKKQ  V 
Subjt:  SLQYLTFTRPDIALSVNRVT-------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVS

Query:  RSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPT
        RSSTEAEY S+A T++++ WI  LL +L + L   P ++CDNV A  L  NPVFH+R KHI IDYHF+  +V    + + ++ +++QLAD LTKPL    
Subjt:  RSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPT

Query:  FLHLRDKL
        F +   K+
Subjt:  FLHLRDKL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.2e-4938.31Show/hide
Query:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPPFNDPLLYRRLVG
        DDI++TG D + +    + L+  F +     L YFLG+E +    G+ ++Q +Y  DLL  + M +AK   TPM+TS  L L++      DP  YR +VG
Subjt:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPPFNDPLLYRRLVG

Query:  SLQYLTFTRPDIALSVNRVT-------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVS
        SLQYL FTRPD++ +VNR++                                                 DT D  ST+G+I +LG +PISWSSKKQ  V 
Subjt:  SLQYLTFTRPDIALSVNRVT-------------------------------------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSIVS

Query:  RSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPT
        RSSTEAEY S+A T+++L WI  LL +L + L   P ++CDNV A  L  NPVFH+R KHI +DYHF+  +V    + + ++ +++QLAD LTKPL    
Subjt:  RSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPT

Query:  FLHLRDKL
        F +   K+
Subjt:  FLHLRDKL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.9e-4135.95Show/hide
Query:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYT-IAPPFNDPLLYRRLVGS
        DDII+   +   +  LK+QL   FK+ +LGPLKYFLGLEI  S  GI + Q KY  DLL  +G+   K    PM  S+         F D   YRRL+G 
Subjt:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYT-IAPPFNDPLLYRRLVGS

Query:  LQYLTFTRPDIALSVNRVTDTSD-------------------------------------------------RRSTSGFIAFLGSNPISWSSKKQSIVSR
        L YL  TR DI+ +VN+++  S+                                                 RRST+G+  FLG++ ISW SKKQ +VS+
Subjt:  LQYLTFTRPDIALSVNRVTDTSD-------------------------------------------------RRSTSGFIAFLGSNPISWSSKKQSIVSR

Query:  SSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTK---PLLS
        SS EAEY +L+  T ++ W+ Q   +L +PL     L+CDN +AI +A N VFH RTKHIE D H V E+ + +  ++ Y +      D  T+   P+L 
Subjt:  SSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTK---PLLS

Query:  PTFLHL
         T +++
Subjt:  PTFLHL

ATMG00810.1 DNA/RNA polymerases superfamily protein1.3e-3036.7Show/hide
Query:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSL
        DDI++TG     + +L  QL+  F + +LGP+ YFLG++I++   G+F++Q KY   +L+ +GM   K   TP+   L+       + DP  +R +VG+L
Subjt:  DDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSL

Query:  QYLTFTRPDIALSVNRVTD-------------------------------------------------TSDRRSTSGFIAFLGSNPISWSSKKQSIVSRS
        QYLT TRPDI+ +VN V                                                   TS RRST+GF  FLG N ISWS+K+Q  VSRS
Subjt:  QYLTFTRPDIALSVNRVTD-------------------------------------------------TSDRRSTSGFIAFLGSNPISWSSKKQSIVSRS

Query:  STEAEYCSLATTTADLYW
        STE EY +LA T A+L W
Subjt:  STEAEYCSLATTTADLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTCGAGCAAAATCAGATATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTCCCACATCATATACAGAAGCCTCCAAATATCCAGAA
TGGCGAACTGCGATGCATGAAGAATTCAATGCTCTTCAAGCACAAGATGACATCATTGTCACTGGACTTGACTATTTATACATTTTTGTTCTTAAAAACCAATTG
GCCCTGGAATTCAAAATATCCAACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCCATTGATGGCATATTTGTTAACCAAGCTAAATATCTC
AATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCA
TTACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTATCTGTAAATCGTGTTACTGATACATCTGATCGACGTTCC
ACCTCTGGCTTCATCGCCTTTCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTATCGTCTCTCGTTCCTCCACAGAAGCAGAATATTGTTCCCTT
GCCACTACTACTGCCGATCTTTATTGGATCCGACAGCTTCTATGTGATCTCCATGTTCCCCTTAAGACTTCACCAACATTATGGTGTGACAATGTTTCCGCTATA
TCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAACATATTGAAATCGATTATCACTTTGTTTGGGAAAAAGTTCTTTGCAAAGACATCTCCATCTGTTAC
ATCTATTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCTTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACTCGAGCAAAATCAGATATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTCCCACATCATATACAGAAGCCTCCAAATATCCAGAA
TGGCGAACTGCGATGCATGAAGAATTCAATGCTCTTCAAGCACAAGATGACATCATTGTCACTGGACTTGACTATTTATACATTTTTGTTCTTAAAAACCAATTG
GCCCTGGAATTCAAAATATCCAACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCCATTGATGGCATATTTGTTAACCAAGCTAAATATCTC
AATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCA
TTACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTATCTGTAAATCGTGTTACTGATACATCTGATCGACGTTCC
ACCTCTGGCTTCATCGCCTTTCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTATCGTCTCTCGTTCCTCCACAGAAGCAGAATATTGTTCCCTT
GCCACTACTACTGCCGATCTTTATTGGATCCGACAGCTTCTATGTGATCTCCATGTTCCCCTTAAGACTTCACCAACATTATGGTGTGACAATGTTTCCGCTATA
TCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAACATATTGAAATCGATTATCACTTTGTTTGGGAAAAAGTTCTTTGCAAAGACATCTCCATCTGTTAC
ATCTATTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCTTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTT
TGA
Protein sequenceShow/hide protein sequence
MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYL
NDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVTDTSDRRSTSGFIAFLGSNPISWSSKKQSIVSRSSTEAEYCSL
ATTTADLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVWEKVLCKDISICYIYSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV