; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0004123 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004123
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr07:9709305..9710326
RNA-Seq ExpressionPay0004123
SyntenyPay0004123
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-9362.65Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF
        MYGIE+LKKLGATVFEGSTDPADAE                                                    TFRGIFEEKYYPTTYCEAKRDEF
Subjt:  MYGIEQLKKLGATVFEGSTDPADAE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF

Query:  MKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------
        ++LKQ SL VAKYERKYTELSRYAEMIVASESDRC RFERGLRFEIRTP            LVETALRV+QSI+EEKS MELSRGVSTT           
Subjt:  MKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------

Query:  ------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRV
              SGCQDFKRRSGGKPLRQMSS SAYQRQS+RASSQ ANSVARSR GQ+SVA+ES RTPC                    CGKTGHFKRDCPQLRV
Subjt:  ------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRV

Query:  AARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
          RRDQ +ESHTVEQ RI  AA E TSGARQKG+VGRPRQ
Subjt:  AARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.1e-9368Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAE------------TFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFER
        MYGIE+LK+LGATVF GSTD ADAE            TFRGIFEEKYYPTT CEAKRDEF++LKQGSL VAKY+RKYTELS YAE+I+ASESDRCRRFER
Subjt:  MYGIEQLKKLGATVFEGSTDPADAE------------TFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFER

Query:  GLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQ
        GL FEIRTP            L+ETALRVEQSI+EEKS MELSRGVSTT                 SGCQDFKRR GGKPLRQMSS SAYQRQSQRASSQ
Subjt:  GLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQ

Query:  SANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
          NSVAR R GQ+SVA+ES RTPC                    CG+TGHFKRDCPQLRV  +RDQ +ESHTVEQPRIL AA EGTSGARQK +VGRPRQ
Subjt:  SANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

KAA0057197.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-10578.68Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAE---------------------TFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASE
        MYGIE+LKKLGATVFEG TDPA+ E                     TFRGIFEEKYYPTTY EAKRDEF++LKQGSL V +YERKYTELSRYAEMIVASE
Subjt:  MYGIEQLKKLGATVFEGSTDPADAE---------------------TFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASE

Query:  SDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARS
        SDRCRRFERGLRFEIRTP            LVETALRVEQSI+EEKSTMELSRGVSTTSGCQDFK RSGGKPLRQMSS SAYQRQSQRASSQSANSVARS
Subjt:  SDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARS

Query:  RMGQKSVANESWRTPCCGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
        R GQ+SVA+ES RTPCCG+TGHFKRDCPQLRVA RRDQ +ESHTVEQPRI  AA EGTSGARQKG+VGRPRQ
Subjt:  RMGQKSVANESWRTPCCGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-9362.65Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF
        MYGIE+LKKLGATVFEGSTDPADAE                                                    TFRGIFEEKYYPTTYCEAKRDEF
Subjt:  MYGIEQLKKLGATVFEGSTDPADAE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF

Query:  MKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------
        ++LKQ SL VAKYERKYTELSRYAEMIVASESDRC RFERGLRFEIRTP            LVETALRV+QSI+EEKS MELSRGVSTT           
Subjt:  MKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------

Query:  ------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRV
              SGCQDFKRRSGGKPLRQMSS SAYQRQS+RASSQ ANSVARSR GQ+SVA+ES RTPC                    CGKTGHFKRDCPQLRV
Subjt:  ------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRV

Query:  AARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
          RRDQ +ESHTVEQ RI  AA E TSGARQKG+VGRPRQ
Subjt:  AARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

XP_008464978.1 PREDICTED: uncharacterized protein LOC103502718 [Cucumis melo]1.1e-10885.26Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAETFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP---
        MYGIE+LKKLGATVFEG TDPA+ ETFRGIFEEKYYPTTY EAKRDEF++LKQGSL V +YERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP   
Subjt:  MYGIEQLKKLGATVFEGSTDPADAETFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP---

Query:  ---------LVETALRVEQSILEEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPCCGKTG
                 LVETALRVEQSI+EEKSTMELSRGVSTTSGCQDFK RSGGKPLRQMSS SAYQRQSQRASSQSANSVARSR GQ+SVA+ES RTPCCG+TG
Subjt:  ---------LVETALRVEQSILEEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPCCGKTG

Query:  HFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
        HFKRDCPQLRVA RRDQ +ESHTVEQPRI  AA EGTSGARQKG+VGRPRQ
Subjt:  HFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

TrEMBL top hitse value%identityAlignment
A0A1S3CMU0 uncharacterized protein LOC1035027185.5e-10985.26Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAETFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP---
        MYGIE+LKKLGATVFEG TDPA+ ETFRGIFEEKYYPTTY EAKRDEF++LKQGSL V +YERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP   
Subjt:  MYGIEQLKKLGATVFEGSTDPADAETFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP---

Query:  ---------LVETALRVEQSILEEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPCCGKTG
                 LVETALRVEQSI+EEKSTMELSRGVSTTSGCQDFK RSGGKPLRQMSS SAYQRQSQRASSQSANSVARSR GQ+SVA+ES RTPCCG+TG
Subjt:  ---------LVETALRVEQSILEEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPCCGKTG

Query:  HFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
        HFKRDCPQLRVA RRDQ +ESHTVEQPRI  AA EGTSGARQKG+VGRPRQ
Subjt:  HFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

A0A5A7T7M6 Reverse transcriptase6.5e-9462.65Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF
        MYGIE+LKKLGATVFEGSTDPADAE                                                    TFRGIFEEKYYPTTYCEAKRDEF
Subjt:  MYGIEQLKKLGATVFEGSTDPADAE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF

Query:  MKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------
        ++LKQ SL VAKYERKYTELSRYAEMIVASESDRC RFERGLRFEIRTP            LVETALRV+QSI+EEKS MELSRGVSTT           
Subjt:  MKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------

Query:  ------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRV
              SGCQDFKRRSGGKPLRQMSS SAYQRQS+RASSQ ANSVARSR GQ+SVA+ES RTPC                    CGKTGHFKRDCPQLRV
Subjt:  ------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRV

Query:  AARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
          RRDQ +ESHTVEQ RI  AA E TSGARQKG+VGRPRQ
Subjt:  AARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

A0A5A7U9X4 DNA/RNA polymerases superfamily protein2.5e-9368Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAE------------TFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFER
        MYGIE+LK+LGATVF GSTD ADAE            TFRGIFEEKYYPTT CEAKRDEF++LKQGSL VAKY+RKYTELS YAE+I+ASESDRCRRFER
Subjt:  MYGIEQLKKLGATVFEGSTDPADAE------------TFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFER

Query:  GLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQ
        GL FEIRTP            L+ETALRVEQSI+EEKS MELSRGVSTT                 SGCQDFKRR GGKPLRQMSS SAYQRQSQRASSQ
Subjt:  GLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQ

Query:  SANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
          NSVAR R GQ+SVA+ES RTPC                    CG+TGHFKRDCPQLRV  +RDQ +ESHTVEQPRIL AA EGTSGARQK +VGRPRQ
Subjt:  SANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

A0A5A7URC7 Gag/pol protein2.8e-10578.68Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAE---------------------TFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASE
        MYGIE+LKKLGATVFEG TDPA+ E                     TFRGIFEEKYYPTTY EAKRDEF++LKQGSL V +YERKYTELSRYAEMIVASE
Subjt:  MYGIEQLKKLGATVFEGSTDPADAE---------------------TFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASE

Query:  SDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARS
        SDRCRRFERGLRFEIRTP            LVETALRVEQSI+EEKSTMELSRGVSTTSGCQDFK RSGGKPLRQMSS SAYQRQSQRASSQSANSVARS
Subjt:  SDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARS

Query:  RMGQKSVANESWRTPCCGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
        R GQ+SVA+ES RTPCCG+TGHFKRDCPQLRVA RRDQ +ESHTVEQPRI  AA EGTSGARQKG+VGRPRQ
Subjt:  RMGQKSVANESWRTPCCGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

A0A5D3BTP3 Reverse transcriptase6.5e-9462.65Show/hide
Query:  MYGIEQLKKLGATVFEGSTDPADAE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF
        MYGIE+LKKLGATVFEGSTDPADAE                                                    TFRGIFEEKYYPTTYCEAKRDEF
Subjt:  MYGIEQLKKLGATVFEGSTDPADAE----------------------------------------------------TFRGIFEEKYYPTTYCEAKRDEF

Query:  MKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------
        ++LKQ SL VAKYERKYTELSRYAEMIVASESDRC RFERGLRFEIRTP            LVETALRV+QSI+EEKS MELSRGVSTT           
Subjt:  MKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTP------------LVETALRVEQSILEEKSTMELSRGVSTT-----------

Query:  ------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRV
              SGCQDFKRRSGGKPLRQMSS SAYQRQS+RASSQ ANSVARSR GQ+SVA+ES RTPC                    CGKTGHFKRDCPQLRV
Subjt:  ------SGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPC--------------------CGKTGHFKRDCPQLRV

Query:  AARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ
          RRDQ +ESHTVEQ RI  AA E TSGARQKG+VGRPRQ
Subjt:  AARRDQRIESHTVEQPRILIAAWEGTSGARQKGLVGRPRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGGATTGAACAGTTGAAGAAATTAGGAGCCACAGTGTTTGAGGGTTCCACGGATCCAGCTGACGCCGAGACGTTCAGAGGCATATTTGAGGAAAAGTACTATCC
CACCACATATTGTGAGGCAAAGAGAGATGAGTTTATGAAGCTGAAACAAGGGTCACTTTTAGTGGCCAAGTACGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGAAA
TGATTGTGGCATCTGAGAGTGATAGGTGTCGCAGGTTCGAGAGAGGGCTACGTTTTGAGATACGTACCCCACTAGTAGAGACTGCTTTACGTGTGGAGCAGAGTATTCTA
GAGGAAAAGTCGACAATGGAGCTTAGTCGAGGAGTTTCAACAACTAGTGGTTGTCAAGACTTCAAGCGTCGATCAGGTGGCAAACCATTGAGGCAGATGAGTTCAAGTAG
TGCTTATCAGAGGCAGAGTCAGAGAGCTTCCAGTCAATCTGCGAACTCAGTAGCAAGATCACGGATGGGTCAAAAGTCTGTTGCTAATGAATCCTGGAGAACCCCATGTT
GTGGAAAAACAGGGCATTTCAAGAGGGATTGTCCACAACTGAGAGTAGCAGCTCGGAGGGACCAAAGAATTGAGTCCCACACAGTTGAGCAGCCAAGAATCTTAATAGCC
GCATGGGAGGGAACTAGTGGTGCAAGACAAAAGGGACTTGTGGGGAGACCTAGGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGGGATTGAACAGTTGAAGAAATTAGGAGCCACAGTGTTTGAGGGTTCCACGGATCCAGCTGACGCCGAGACGTTCAGAGGCATATTTGAGGAAAAGTACTATCC
CACCACATATTGTGAGGCAAAGAGAGATGAGTTTATGAAGCTGAAACAAGGGTCACTTTTAGTGGCCAAGTACGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGAAA
TGATTGTGGCATCTGAGAGTGATAGGTGTCGCAGGTTCGAGAGAGGGCTACGTTTTGAGATACGTACCCCACTAGTAGAGACTGCTTTACGTGTGGAGCAGAGTATTCTA
GAGGAAAAGTCGACAATGGAGCTTAGTCGAGGAGTTTCAACAACTAGTGGTTGTCAAGACTTCAAGCGTCGATCAGGTGGCAAACCATTGAGGCAGATGAGTTCAAGTAG
TGCTTATCAGAGGCAGAGTCAGAGAGCTTCCAGTCAATCTGCGAACTCAGTAGCAAGATCACGGATGGGTCAAAAGTCTGTTGCTAATGAATCCTGGAGAACCCCATGTT
GTGGAAAAACAGGGCATTTCAAGAGGGATTGTCCACAACTGAGAGTAGCAGCTCGGAGGGACCAAAGAATTGAGTCCCACACAGTTGAGCAGCCAAGAATCTTAATAGCC
GCATGGGAGGGAACTAGTGGTGCAAGACAAAAGGGACTTGTGGGGAGACCTAGGCAGTAG
Protein sequenceShow/hide protein sequence
MYGIEQLKKLGATVFEGSTDPADAETFRGIFEEKYYPTTYCEAKRDEFMKLKQGSLLVAKYERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTPLVETALRVEQSIL
EEKSTMELSRGVSTTSGCQDFKRRSGGKPLRQMSSSSAYQRQSQRASSQSANSVARSRMGQKSVANESWRTPCCGKTGHFKRDCPQLRVAARRDQRIESHTVEQPRILIA
AWEGTSGARQKGLVGRPRQ