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Pay0004153 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004153
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE2
Genome locationchr11:7645347..7645872
RNA-Seq ExpressionPay0004153
SyntenyPay0004153
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045109.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.1e-5780.69Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSG L+SAHQGE+FHD  +YR  VGALQYATLTHPE SYSVNKACQFMHSPKL HWQLVK ILRYLKG+LSHGL L+ S NL SLVGF D DWASD  D
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        RKS+SG+CVYF NNLVSWGSKKQSIIFRSS   EYRCLALLA EL
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.6e-5276.55Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSG LLSA QGE FHD  + R  VGALQYATLTHPE SYSVNKACQFMH+PK THWQLVK ILRYLKG L HGL L  S+N  SLVGF D DWASD  D
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        RKS+SG CVYF NNLVSWGSKKQSII RSS   EYRCLALLA E+
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

KAA0063213.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.7e-5276.55Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSG LLSA QGE FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLVK ILRYLKG L H L L  S+N+ SL GFVD DWASD  D
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        RKS+SGFCVYF NNLVSWGSKKQSII RSS   EYRCL LLA EL
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

XP_016902929.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]3.5e-7699.32Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNL SLVGFVDVDWASDLVD
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST
        RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST

XP_016903397.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.7e-5276.55Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSG LLSA QGE FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLVK ILRYLKG L H L L  S+N+ SL GFVD DWASD  D
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        RKS+SGFCVYF NNLVSWGSKKQSII RSS   EYRCL LLA EL
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

TrEMBL top hitse value%identityAlignment
A0A1S4E3X7 uncharacterized mitochondrial protein AtMg00810-like1.7e-7699.32Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNL SLVGFVDVDWASDLVD
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST
        RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST

A0A5A7UFS3 Putative mitochondrial protein7.6e-5376.55Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSG LLSA QGE FHD  + R  VGALQYATLTHPE SYSVNKACQFMH+PK THWQLVK ILRYLKG L HGL L  S+N  SLVGF D DWASD  D
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        RKS+SG CVYF NNLVSWGSKKQSII RSS   EYRCLALLA E+
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

A0A5A7V553 Putative mitochondrial protein1.3e-5276.55Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSG LLSA QGE FHD  +YR  VGALQYATLTHPE SYSVNKACQF+H+PK THWQLVK ILRYLKG L H L L  S+N+ SL GFVD DWASD  D
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        RKS+SGFCVYF NNLVSWGSKKQSII RSS   EYRCL LLA EL
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

A0A5A7VLX3 Putative mitochondrial protein1.7e-7699.32Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNL SLVGFVDVDWASDLVD
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST
        RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST

A0A5D3DK36 Putative mitochondrial protein1.0e-5780.69Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        MVSG L+SAHQGE+FHD  +YR  VGALQYATLTHPE SYSVNKACQFMHSPKL HWQLVK ILRYLKG+LSHGL L+ S NL SLVGF D DWASD  D
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        RKS+SG+CVYF NNLVSWGSKKQSIIFRSS   EYRCLALLA EL
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1613.8e-1739.17Show/hide
Query:  YRGAVGALQY-ATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVYFDNNLVSWG
        Y  AVGA+ Y   +T P+ + +V    QF   P  THWQ +K +LRYL+   ++GL    +     LVG+ D DWA D+  R+S+SG+    +   VSW 
Subjt:  YRGAVGALQY-ATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVYFDNNLVSWG

Query:  SKKQSIIFRSSIAVEYRCLA
        SKKQ  +  SS   EY  L+
Subjt:  SKKQSIIFRSSIAVEYRCLA

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-1437.93Show/hide
Query:  YRGAVGALQYATL-THPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVYFDNNLVSWG
        Y  AVG+L YA + T P+ +++V    +F+ +P   HW+ VK ILRYL+G     L    S+ +  L G+ D D A D+ +RKSS+G+   F    +SW 
Subjt:  YRGAVGALQYATL-THPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVYFDNNLVSWG

Query:  SKKQSIIFRSSIAVEY
        SK Q  +  S+   EY
Subjt:  SKKQSIIFRSSIAVEY

P92519 Uncharacterized mitochondrial protein AtMg008101.3e-2846.21Show/hide
Query:  FHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVYFDNN
        + D   +R  VGALQY TLT P+ SY+VN  CQ MH P L  + L+K +LRY+KG + HGL + H N+ +++  F D DWA     R+S++GFC +   N
Subjt:  FHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVYFDNN

Query:  LVSWGSKKQSIIFRSSIAVEYRCLALLAIELS
        ++SW +K+Q  + RSS   EYR LAL A EL+
Subjt:  LVSWGSKKQSIIFRSSIAVEYRCLALLAIELS

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.3e-2746.04Show/hide
Query:  LSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSG
        LS + G    D   YRG VG+LQY   T P+ SY+VN+  QFMH P   H Q +K ILRYL G  +HG+ LK  N L SL  + D DWA D  D  S++G
Subjt:  LSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSG

Query:  FCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        + VY  ++ +SW SKKQ  + RSS   EYR +A  + E+
Subjt:  FCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.7e-2844.14Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        M +   L+ H G    D   YRG VG+LQY   T P+ SY+VN+  Q+MH P   HW  +K +LRYL G   HG+ LK  N L SL  + D DWA D  D
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
          S++G+ VY  ++ +SW SKKQ  + RSS   EYR +A  + EL
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.9e-2237.24Show/hide
Query:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD
        M   +  SAH G  F D   YR  +G L Y  +T  + S++VNK  QF  +P+L H Q V  IL Y+KG +  GL    S   + L  F D  + S    
Subjt:  MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVD

Query:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL
        R+S++G+C++   +L+SW SKKQ ++ +SS   EYR L+    E+
Subjt:  RKSSSGFCVYFDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIEL

ATMG00240.1 Gag-Pol-related retrotransposon family protein6.7e-0936.71Show/hide
Query:  YATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFC
        Y T+T P+ +++VN+  QF  + +    Q V  +L Y+KG +  GL    +++L  L  F D DWAS    R+S +GFC
Subjt:  YATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFC

ATMG00810.1 DNA/RNA polymerases superfamily protein8.9e-3046.21Show/hide
Query:  FHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVYFDNN
        + D   +R  VGALQY TLT P+ SY+VN  CQ MH P L  + L+K +LRY+KG + HGL + H N+ +++  F D DWA     R+S++GFC +   N
Subjt:  FHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVYFDNN

Query:  LVSWGSKKQSIIFRSSIAVEYRCLALLAIELS
        ++SW +K+Q  + RSS   EYR LAL A EL+
Subjt:  LVSWGSKKQSIIFRSSIAVEYRCLALLAIELS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGTGGCCTTTTACTATCTGCTCATCAAGGTGAATCTTTTCATGACACTTGCATGTATCGTGGTGCAGTTGGAGCTTTACAATATGCAACTCTTACTCATCCTGA
GAAATCCTATAGTGTAAACAAAGCATGTCAATTCATGCATTCTCCTAAACTTACACATTGGCAACTTGTGAAACACATTCTGAGGTATCTTAAAGGTGCTTTATCTCATG
GATTGCGACTTAAACATTCTAACAACTTAATATCTCTTGTTGGTTTTGTTGATGTCGACTGGGCATCTGACCTCGTTGATAGAAAGTCATCTTCAGGCTTTTGTGTTTAT
TTTGACAACAATTTAGTCTCTTGGGGATCAAAGAAACAATCAATTATTTTCAGATCTAGCATTGCAGTAGAGTATCGGTGTCTTGCACTTCTTGCTATTGAACTGTCCAC
TTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGTGGCCTTTTACTATCTGCTCATCAAGGTGAATCTTTTCATGACACTTGCATGTATCGTGGTGCAGTTGGAGCTTTACAATATGCAACTCTTACTCATCCTGA
GAAATCCTATAGTGTAAACAAAGCATGTCAATTCATGCATTCTCCTAAACTTACACATTGGCAACTTGTGAAACACATTCTGAGGTATCTTAAAGGTGCTTTATCTCATG
GATTGCGACTTAAACATTCTAACAACTTAATATCTCTTGTTGGTTTTGTTGATGTCGACTGGGCATCTGACCTCGTTGATAGAAAGTCATCTTCAGGCTTTTGTGTTTAT
TTTGACAACAATTTAGTCTCTTGGGGATCAAAGAAACAATCAATTATTTTCAGATCTAGCATTGCAGTAGAGTATCGGTGTCTTGCACTTCTTGCTATTGAACTGTCCAC
TTAA
Protein sequenceShow/hide protein sequence
MVSGLLLSAHQGESFHDTCMYRGAVGALQYATLTHPEKSYSVNKACQFMHSPKLTHWQLVKHILRYLKGALSHGLRLKHSNNLISLVGFVDVDWASDLVDRKSSSGFCVY
FDNNLVSWGSKKQSIIFRSSIAVEYRCLALLAIELST