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Pay0004163 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004163
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNeurochondrin isoform X3
Genome locationchr06:23908411..23910995
RNA-Seq ExpressionPay0004163
SyntenyPay0004163
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060392.1 neurochondrin isoform X3 [Cucumis melo var. makuwa]4.3e-2563.87Show/hide
Query:  MAEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQL
        MAEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQ                                           
Subjt:  MAEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQL

Query:  NMNDDEMAQMDLLEIITAV
        NMNDDEMAQMDLLEIITAV
Subjt:  NMNDDEMAQMDLLEIITAV

TYK19981.1 neurochondrin isoform X1 [Cucumis melo var. makuwa]7.8e-1955.17Show/hide
Query:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM
        EDSKELSVIMMAGS+CALIFDF SE A LSNPNFA+KS D LCKLFSRIFILSQQ+                                          +M
Subjt:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM

Query:  NDDEMAQMDLLEIITA
        NDD MAQMDLLEIITA
Subjt:  NDDEMAQMDLLEIITA

XP_004145520.1 neurochondrin isoform X2 [Cucumis sativus]2.3e-1853.45Show/hide
Query:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM
        EDS+ELSVIMM GS+CALIFDF SE A LSNPNFA+KS D LC+LFSRIFILSQQ+                                          +M
Subjt:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM

Query:  NDDEMAQMDLLEIITA
        NDDEMAQMDLLEIITA
Subjt:  NDDEMAQMDLLEIITA

XP_008452892.1 PREDICTED: neurochondrin isoform X1 [Cucumis melo]1.5e-1753.45Show/hide
Query:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM
        EDSKELSVIMMAGS+CALIFDF SE A L +PNFA+KS D LCKLFSRIFILSQQ+                                          +M
Subjt:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM

Query:  NDDEMAQMDLLEIITA
        NDD MAQMDLLEIITA
Subjt:  NDDEMAQMDLLEIITA

XP_031740388.1 uncharacterized protein LOC101217523 isoform X1 [Cucumis sativus]2.3e-1853.45Show/hide
Query:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM
        EDS+ELSVIMM GS+CALIFDF SE A LSNPNFA+KS D LC+LFSRIFILSQQ+                                          +M
Subjt:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM

Query:  NDDEMAQMDLLEIITA
        NDDEMAQMDLLEIITA
Subjt:  NDDEMAQMDLLEIITA

TrEMBL top hitse value%identityAlignment
A0A0A0L170 Uncharacterized protein1.1e-1853.45Show/hide
Query:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM
        EDS+ELSVIMM GS+CALIFDF SE A LSNPNFA+KS D LC+LFSRIFILSQQ+                                          +M
Subjt:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM

Query:  NDDEMAQMDLLEIITA
        NDDEMAQMDLLEIITA
Subjt:  NDDEMAQMDLLEIITA

A0A1S3BW48 neurochondrin isoform X17.1e-1853.45Show/hide
Query:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM
        EDSKELSVIMMAGS+CALIFDF SE A L +PNFA+KS D LCKLFSRIFILSQQ+                                          +M
Subjt:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM

Query:  NDDEMAQMDLLEIITA
        NDD MAQMDLLEIITA
Subjt:  NDDEMAQMDLLEIITA

A0A5A7UX09 Neurochondrin isoform X32.1e-2563.87Show/hide
Query:  MAEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQL
        MAEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQ                                           
Subjt:  MAEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQL

Query:  NMNDDEMAQMDLLEIITAV
        NMNDDEMAQMDLLEIITAV
Subjt:  NMNDDEMAQMDLLEIITAV

A0A5A7VFZ2 Neurochondrin isoform X17.1e-1853.45Show/hide
Query:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM
        EDSKELSVIMMAGS+CALIFDF SE A L +PNFA+KS D LCKLFSRIFILSQQ+                                          +M
Subjt:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM

Query:  NDDEMAQMDLLEIITA
        NDD MAQMDLLEIITA
Subjt:  NDDEMAQMDLLEIITA

A0A5D3D8S2 Neurochondrin isoform X13.8e-1955.17Show/hide
Query:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM
        EDSKELSVIMMAGS+CALIFDF SE A LSNPNFA+KS D LCKLFSRIFILSQQ+                                          +M
Subjt:  EDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNM

Query:  NDDEMAQMDLLEIITA
        NDD MAQMDLLEIITA
Subjt:  NDDEMAQMDLLEIITA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G32050.1 neurochondrin family protein9.9e-0442.11Show/hide
Query:  AEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQE
        A+ S + SV+MMA S+C+LIFDF SE A       +  S D L +L +R    S Q+
Subjt:  AEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGGATTCTAAAGAGCTATCTGTTATCATGATGGCTGGCAGTCTATGTGCCTTGATATTTGATTTCATCTCAGAGACTGCTTTTCTAAGCAATCCTAAT
TTTGCCGAGAAATCTTTCGATATCTTGTGCAAACTCTTTTCAAGAATCTTCATTTTGTCTCAACAGGAACATTGTGAGCTTATCATCACTCCTTCCATCTTGGTA
CTTGTACTTCTTTCTGGAAAGAGCTTAGTGAGCTTCTATGTGGCGAATCATCTTTTATTCACATGTTGGAAGCAATTGCAAATTCAACTGAACATGAACGACGAT
GAAATGGCGCAGATGGATCTTCTCGAGATTATCACAGCAGTATTGGAAGCAACAAGAAAAGTTAATGCTAGGAAGCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGGATTCTAAAGAGCTATCTGTTATCATGATGGCTGGCAGTCTATGTGCCTTGATATTTGATTTCATCTCAGAGACTGCTTTTCTAAGCAATCCTAAT
TTTGCCGAGAAATCTTTCGATATCTTGTGCAAACTCTTTTCAAGAATCTTCATTTTGTCTCAACAGGAACATTGTGAGCTTATCATCACTCCTTCCATCTTGGTA
CTTGTACTTCTTTCTGGAAAGAGCTTAGTGAGCTTCTATGTGGCGAATCATCTTTTATTCACATGTTGGAAGCAATTGCAAATTCAACTGAACATGAACGACGAT
GAAATGGCGCAGATGGATCTTCTCGAGATTATCACAGCAGTATTGGAAGCAACAAGAAAAGTTAATGCTAGGAAGCTTCAATAA
Protein sequenceShow/hide protein sequence
MAEDSKELSVIMMAGSLCALIFDFISETAFLSNPNFAEKSFDILCKLFSRIFILSQQEHCELIITPSILVLVLLSGKSLVSFYVANHLLFTCWKQLQIQLNMNDD
EMAQMDLLEIITAVLEATRKVNARKLQ