; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0004184 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004184
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr11:23501910..23510809
RNA-Seq ExpressionPay0004184
SyntenyPay0004184
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054574.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-14790.55Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
        MDVKLAFLHGNLNEEVYVDQLPGYVQQ                             DDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV

Query:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
        AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
Subjt:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP

Query:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST
        DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST
Subjt:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST

Query:  IKLSRNR
        IKLSRNR
Subjt:  IKLSRNR

KAE8680790.1 hypothetical protein F3Y22_tig00111366pilonHSYRG00100 [Hibiscus syriacus]8.3e-11161.96Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI
        +DVK AFLHG+L EEV++DQ PGY + GN  KVY+LKKALYGLKQAPR                                 + IV+LYVDDLIYTG++ +
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI

Query:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI
        MFE FK++MM EFEM++LGMMH FLGIEV+QS A IFI+QKKY  EILD+FQMK+CN    P E  LKL KD  G K+NSTLYKQ+VGSLMYLTATRPDI
Subjt:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI

Query:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT
        M+AVS ISR+M  P + HLL AKRILRY++GT + G+ +++  K +L GF+DSDYAGD +DRKS SGYVFMLG+GV+SWSSKKQ IVTLSTTEAE VVAT
Subjt:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT

Query:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRNRP-KSRSK
        +CACQAIWL+ ILE L +K++  ++I+YDN+STIKLS+N    SRSK
Subjt:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRNRP-KSRSK

RVW92024.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.5e-10961.06Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI
        +DVK AFLHGNL E+V+VDQ PGY++  N  KVYRLKKALYGLKQAPR                                 +LIV LYVDDLI+TGND +
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI

Query:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI
        MFE FK++MM EFEM++LGMMHYFLGIEV+QS   IFI+QKKY  EIL+RFQMK+CN  + P +  LKL KD  GKK+++ +YKQ+VGSLMYLTATRPDI
Subjt:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI

Query:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT
        M++VS ISR+M +P + H LAAK+I RY++GT D G+ Y++ ++ +L+GF+DSDYAGD ++R+S SGYVFMLG+G +SWSSKKQPIVTLSTTEAE V AT
Subjt:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT

Query:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN
        +CACQAIWLR ILE L+ KQ  A+ I  DN+STIKLS+N
Subjt:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN

XP_016901936.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.6e-202100Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
        MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV

Query:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
        AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
Subjt:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP

Query:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST
        DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST
Subjt:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST

Query:  IKLSRNRPKSRSKITYCSNFELIVLVAVELDDVPSATSAMTSVSDCDSVVGFEMYLGVHVYFPVK
        IKLSRNRPKSRSKITYCSNFELIVLVAVELDDVPSATSAMTSVSDCDSVVGFEMYLGVHVYFPVK
Subjt:  IKLSRNRPKSRSKITYCSNFELIVLVAVELDDVPSATSAMTSVSDCDSVVGFEMYLGVHVYFPVK

XP_038889278.1 uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]1.0e-13283.45Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
        +DVK AFLHGNLNEEVY+DQ  GYVQ  NARKVY LKKALYGLKQA R     LYVDDLIYTGND IMFEEFKQ MM EFEMT+LGMMHYFLGIEVIQSV
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV

Query:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
          IFINQKKYALEILDRFQM+NCNSAT  +EPNLKLTKD EGKK+N+TLYKQM+GSLMYLTATRPDIMYAVS ISRFM SP K HLL AKRIL Y+KGTP
Subjt:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP

Query:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYD
         LG+LYQ+R KLNLVGFSDSDYAGDLNDR S SGYVFMLG G ISWSSKKQPI+TLST EAELV ATSCACQAIWLRNILENL+YKQEE SIIH D
Subjt:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYD

TrEMBL top hitse value%identityAlignment
A0A1S4E135 uncharacterized mitochondrial protein AtMg00810-like7.6e-203100Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
        MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV

Query:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
        AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
Subjt:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP

Query:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST
        DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST
Subjt:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST

Query:  IKLSRNRPKSRSKITYCSNFELIVLVAVELDDVPSATSAMTSVSDCDSVVGFEMYLGVHVYFPVK
        IKLSRNRPKSRSKITYCSNFELIVLVAVELDDVPSATSAMTSVSDCDSVVGFEMYLGVHVYFPVK
Subjt:  IKLSRNRPKSRSKITYCSNFELIVLVAVELDDVPSATSAMTSVSDCDSVVGFEMYLGVHVYFPVK

A0A2P6S936 Putative RNA-directed DNA polymerase1.9e-10861.95Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI
        +DVK AFLHG L E+VY+DQ  GYV++G+  KVYRLKKALYGLKQAPR                                  L V LYVDDLIYTGND  
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI

Query:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI
        MF +FK +MM EFEMT+L  +HYFLGIEV+QS A IFI Q+KYALE+L++F+MK+CN+  IP EP LKLT D +GKK+ ST +KQ+VGSLMYLTATRPDI
Subjt:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI

Query:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT
        M +VS ISRFM  P + HL AAKRILRY+KGT D G+LY+R  K  LVGF+DSDYAGD+NDR+S S YVFM+GSG +SW+SKKQPIVTLSTTEAE V AT
Subjt:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT

Query:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN
        +CA QAIWLR +LE L+Y+Q+  + I+ DN S IKLS+N
Subjt:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN

A0A438I5N6 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-10961.06Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI
        +DVK AFLHGNL E+V+VDQ PGY++  N  KVYRLKKALYGLKQAPR                                 +LIV LYVDDLI+TGND +
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI

Query:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI
        MFE FK++MM EFEM++LGMMHYFLGIEV+QS   IFI+QKKY  EIL+RFQMK+CN  + P +  LKL KD  GKK+++ +YKQ+VGSLMYLTATRPDI
Subjt:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI

Query:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT
        M++VS ISR+M +P + H LAAK+I RY++GT D G+ Y++ ++ +L+GF+DSDYAGD ++R+S SGYVFMLG+G +SWSSKKQPIVTLSTTEAE V AT
Subjt:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT

Query:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN
        +CACQAIWLR ILE L+ KQ  A+ I  DN+STIKLS+N
Subjt:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN

A0A5D3DVM8 Putative mitochondrial protein9.1e-14890.55Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
        MDVKLAFLHGNLNEEVYVDQLPGYVQQ                             DDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSV

Query:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
        AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP
Subjt:  AEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTP

Query:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST
        DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST
Subjt:  DLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTST

Query:  IKLSRNR
        IKLSRNR
Subjt:  IKLSRNR

A0A6A2YN54 Reverse transcriptase Ty1/copia-type domain-containing protein4.0e-11161.96Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI
        +DVK AFLHG+L EEV++DQ PGY + GN  KVY+LKKALYGLKQAPR                                 + IV+LYVDDLIYTG++ +
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI

Query:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI
        MFE FK++MM EFEM++LGMMH FLGIEV+QS A IFI+QKKY  EILD+FQMK+CN    P E  LKL KD  G K+NSTLYKQ+VGSLMYLTATRPDI
Subjt:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDI

Query:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT
        M+AVS ISR+M  P + HLL AKRILRY++GT + G+ +++  K +L GF+DSDYAGD +DRKS SGYVFMLG+GV+SWSSKKQ IVTLSTTEAE VVAT
Subjt:  MYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVAT

Query:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRNRP-KSRSK
        +CACQAIWL+ ILE L +K++  ++I+YDN+STIKLS+N    SRSK
Subjt:  SCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRNRP-KSRSK

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.8e-4433.14Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRI----------------------------------LIVYLYVDDLIYTGNDL
        MDVK AFL+G L EE+Y+ +LP  +   N+  V +L KA+YGLKQA R                                   + V LYVDD++    D+
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRI----------------------------------LIVYLYVDDLIYTGNDL

Query:  IMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMY-LTATRP
             FK+ +ME+F MT+L  + +F+GI +     +I+++Q  Y  +IL +F M+NCN+ + P+   +        +  N T  + ++G LMY +  TRP
Subjt:  IMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMY-LTATRP

Query:  DIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKL--NLVGFSDSDYAGDLNDRKSISGYVF-MLGSGVISWSSKKQPIVTLSTTEAE
        D+  AV+ +SR+ +          KR+LRY+KGT D+ +++++       ++G+ DSD+AG   DRKS +GY+F M    +I W++K+Q  V  S+TEAE
Subjt:  DIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKL--NLVGFSDSDYAGDLNDRKSISGYVF-MLGSGVISWSSKKQPIVTLSTTEAE

Query:  LVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN
         +       +A+WL+ +L ++N K E    I+ DN   I ++ N
Subjt:  LVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-5336.78Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI
        +DVK AFLHG+L EE+Y++Q  G+   G    V +L K+LYGLKQAPR                                  +I+ LYVDD++  G D  
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR---------------------------------ILIVYLYVDDLIYTGNDLI

Query:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVI--QSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKD------REGKKINSTLYKQMVGSLMY
        +  + K  + + F+M +LG     LG++++  ++  +++++Q+KY   +L+RF MKN    + P+  +LKL+K        E   +    Y   VGSLMY
Subjt:  MFEEFKQTMMEEFEMTNLGMMHYFLGIEVI--QSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKD------REGKKINSTLYKQMVGSLMY

Query:  -LTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLST
         +  TRPDI +AV  +SRF+ +P K H  A K ILRY++GT    + +     + L G++D+D AGD+++RKS +GY+F    G ISW SK Q  V LST
Subjt:  -LTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLST

Query:  TEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN
        TEAE + AT    + IWL+  L+ L   Q+E  +++ D+ S I LS+N
Subjt:  TEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN

P92519 Uncharacterized mitochondrial protein AtMg008101.7e-3437Show/hide
Query:  LIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKD-REGKKINST
        + + LYVDD++ TG+   +       +   F M +LG +HYFLGI++    + +F++Q KYA +IL+   M +C   + P+   LKL       K  + +
Subjt:  LIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKD-REGKKINST

Query:  LYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSS
         ++ +VG+L YLT TRPDI YAV+ + + M+ P        KR+LRY+KGT   G+   +  KLN+  F DSD+AG  + R+S +G+   LG  +ISWS+
Subjt:  LYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSS

Query:  KKQPIVTLSTTEAELVVATSCACQAIW
        K+QP V+ S+TE E       A +  W
Subjt:  KKQPIVTLSTTEAELVVATSCACQAIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.6e-5436.39Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR--------------------------------ILIVYLYVDDLIYTGNDLIM
        +DV  AFL G L ++VY+ Q PG++ +     V +L+KALYGLKQAPR                                I+ + +YVDD++ TGND  +
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR--------------------------------ILIVYLYVDDLIYTGNDLIM

Query:  FEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIM
               + + F + +   +HYFLGIE  +    + ++Q++Y L++L R  M      T P+ P+ KL+     K  + T Y+ +VGSL YL  TRPDI 
Subjt:  FEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIM

Query:  YAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATS
        YAV+ +S+FM+ P + HL A KRILRY+ GTP+ G+  ++   L+L  +SD+D+AGD +D  S +GY+  LG   ISWSSKKQ  V  S+TEAE     +
Subjt:  YAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATS

Query:  CACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN
         + +  W+ ++L  L  +     +I+ DN     L  N
Subjt:  CACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.8e-5335.8Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR--------------------------------ILIVYLYVDDLIYTGNDLIM
        +DV  AFL G L +EVY+ Q PG+V +     V RL+KA+YGLKQAPR                                I+ + +YVDD++ TGND ++
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPR--------------------------------ILIVYLYVDDLIYTGNDLIM

Query:  FEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIM
         +     + + F +     +HYFLGIE  +    + ++Q++Y L++L R  M        P+  + KLT     K  + T Y+ +VGSL YL  TRPD+ 
Subjt:  FEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIM

Query:  YAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATS
        YAV+ +S++M+ P   H  A KR+LRY+ GTPD G+  ++   L+L  +SD+D+AGD +D  S +GY+  LG   ISWSSKKQ  V  S+TEAE     +
Subjt:  YAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATS

Query:  CACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN
         + +  W+ ++L  L  +     +I+ DN     L  N
Subjt:  CACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.0e-5133.33Show/hide
Query:  MDVKLAFLHGNLNEEVYVDQLPGY-VQQGNA---RKVYRLKKALYGLKQAPR--------------------------------ILIVYLYVDDLIYTGN
        +D+  AFL+G+L+EE+Y+   PGY  +QG++     V  LKK++YGLKQA R                                 L V +YVDD+I   N
Subjt:  MDVKLAFLHGNLNEEVYVDQLPGY-VQQGNA---RKVYRLKKALYGLKQAPR--------------------------------ILIVYLYVDDLIYTGN

Query:  DLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATR
        +    +E K  +   F++ +LG + YFLG+E+ +S A I I Q+KYAL++LD   +  C  +++P++P++  +    G  +++  Y++++G LMYL  TR
Subjt:  DLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATR

Query:  PDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELV
         DI +AV+ +S+F  +P   H  A  +IL YIKGT   G+ Y  + ++ L  FSD+ +    + R+S +GY   LG+ +ISW SKKQ +V+ S+ EAE  
Subjt:  PDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELV

Query:  VATSCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN
          +    + +WL      L     + +++  DNT+ I ++ N
Subjt:  VATSCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRN

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.4e-1038.46Show/hide
Query:  MYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGY
        MYLT TRPD+ +AV+ +S+F ++     + A  ++L Y+KGT   G+ Y     L L  F+DSD+A   + R+S++G+
Subjt:  MYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGY

ATMG00810.1 DNA/RNA polymerases superfamily protein1.2e-3537Show/hide
Query:  LIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKD-REGKKINST
        + + LYVDD++ TG+   +       +   F M +LG +HYFLGI++    + +F++Q KYA +IL+   M +C   + P+   LKL       K  + +
Subjt:  LIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKYALEILDRFQMKNCNSATIPVEPNLKLTKD-REGKKINST

Query:  LYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSS
         ++ +VG+L YLT TRPDI YAV+ + + M+ P        KR+LRY+KGT   G+   +  KLN+  F DSD+AG  + R+S +G+   LG  +ISWS+
Subjt:  LYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDSDYAGDLNDRKSISGYVFMLGSGVISWSS

Query:  KKQPIVTLSTTEAELVVATSCACQAIW
        K+QP V+ S+TE E       A +  W
Subjt:  KKQPIVTLSTTEAELVVATSCACQAIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTGAAATTAGCCTTTCTGCATGGCAACTTGAATGAAGAAGTTTACGTAGATCAACTCCCTGGATATGTTCAACAGGGTAATGCAAGAAAGGTATATCGTTTGAA
GAAGGCTTTATATGGATTGAAGCAAGCTCCTAGGATTTTGATAGTATATTTGTATGTAGATGATCTGATTTACACAGGAAATGACTTGATTATGTTTGAAGAATTCAAGC
AGACCATGATGGAAGAGTTTGAAATGACAAATCTAGGGATGATGCATTACTTTCTCGGCATTGAAGTAATACAATCAGTAGCAGAAATTTTCATCAATCAGAAGAAATAT
GCACTGGAGATCTTGGACAGGTTTCAAATGAAGAATTGCAACTCAGCCACAATTCCAGTTGAACCCAATTTGAAGCTCACAAAGGACCGTGAAGGAAAGAAGATCAACAG
TACTCTTTATAAGCAAATGGTTGGAAGCTTGATGTACTTAACAGCTACAAGGCCTGATATTATGTATGCAGTAAGTTCAATTAGCAGGTTTATGAATTCTCCAATTAAGT
TTCATCTTCTTGCTGCCAAAAGAATCTTACGTTACATAAAAGGGACTCCTGATCTTGGCATGCTTTATCAAAGAAGAAGAAAATTAAACCTTGTTGGTTTTAGTGATAGT
GATTATGCAGGAGATTTAAATGATAGAAAGAGTATTTCAGGGTATGTTTTCATGCTTGGTTCAGGAGTTATCTCATGGTCTTCCAAAAAGCAGCCAATTGTCACATTATC
CACGACCGAAGCTGAACTTGTAGTAGCAACATCATGTGCATGTCAAGCCATTTGGTTGAGGAACATTCTTGAGAACTTGAATTATAAGCAAGAAGAAGCATCTATCATTC
ATTATGATAACACATCAACAATCAAGCTCTCAAGGAATCGTCCCAAAAGTAGATCAAAGATAACCTACTGTTCAAACTTCGAATTGATTGTTCTTGTTGCAGTAGAGCTT
GACGATGTTCCATCAGCGACTTCAGCAATGACTTCAGTTTCAGATTGTGATTCTGTAGTTGGGTTTGAGATGTATTTGGGAGTGCATGTTTATTTTCCTGTGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTGAAATTAGCCTTTCTGCATGGCAACTTGAATGAAGAAGTTTACGTAGATCAACTCCCTGGATATGTTCAACAGGGTAATGCAAGAAAGGTATATCGTTTGAA
GAAGGCTTTATATGGATTGAAGCAAGCTCCTAGGATTTTGATAGTATATTTGTATGTAGATGATCTGATTTACACAGGAAATGACTTGATTATGTTTGAAGAATTCAAGC
AGACCATGATGGAAGAGTTTGAAATGACAAATCTAGGGATGATGCATTACTTTCTCGGCATTGAAGTAATACAATCAGTAGCAGAAATTTTCATCAATCAGAAGAAATAT
GCACTGGAGATCTTGGACAGGTTTCAAATGAAGAATTGCAACTCAGCCACAATTCCAGTTGAACCCAATTTGAAGCTCACAAAGGACCGTGAAGGAAAGAAGATCAACAG
TACTCTTTATAAGCAAATGGTTGGAAGCTTGATGTACTTAACAGCTACAAGGCCTGATATTATGTATGCAGTAAGTTCAATTAGCAGGTTTATGAATTCTCCAATTAAGT
TTCATCTTCTTGCTGCCAAAAGAATCTTACGTTACATAAAAGGGACTCCTGATCTTGGCATGCTTTATCAAAGAAGAAGAAAATTAAACCTTGTTGGTTTTAGTGATAGT
GATTATGCAGGAGATTTAAATGATAGAAAGAGTATTTCAGGGTATGTTTTCATGCTTGGTTCAGGAGTTATCTCATGGTCTTCCAAAAAGCAGCCAATTGTCACATTATC
CACGACCGAAGCTGAACTTGTAGTAGCAACATCATGTGCATGTCAAGCCATTTGGTTGAGGAACATTCTTGAGAACTTGAATTATAAGCAAGAAGAAGCATCTATCATTC
ATTATGATAACACATCAACAATCAAGCTCTCAAGGAATCGTCCCAAAAGTAGATCAAAGATAACCTACTGTTCAAACTTCGAATTGATTGTTCTTGTTGCAGTAGAGCTT
GACGATGTTCCATCAGCGACTTCAGCAATGACTTCAGTTTCAGATTGTGATTCTGTAGTTGGGTTTGAGATGTATTTGGGAGTGCATGTTTATTTTCCTGTGAAGTGA
Protein sequenceShow/hide protein sequence
MDVKLAFLHGNLNEEVYVDQLPGYVQQGNARKVYRLKKALYGLKQAPRILIVYLYVDDLIYTGNDLIMFEEFKQTMMEEFEMTNLGMMHYFLGIEVIQSVAEIFINQKKY
ALEILDRFQMKNCNSATIPVEPNLKLTKDREGKKINSTLYKQMVGSLMYLTATRPDIMYAVSSISRFMNSPIKFHLLAAKRILRYIKGTPDLGMLYQRRRKLNLVGFSDS
DYAGDLNDRKSISGYVFMLGSGVISWSSKKQPIVTLSTTEAELVVATSCACQAIWLRNILENLNYKQEEASIIHYDNTSTIKLSRNRPKSRSKITYCSNFELIVLVAVEL
DDVPSATSAMTSVSDCDSVVGFEMYLGVHVYFPVK