; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0004238 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004238
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr04:11218797..11221413
RNA-Seq ExpressionPay0004238
SyntenyPay0004238
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035966.1 F5J5.1 [Cucumis melo var. makuwa]4.8e-15851.24Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------
        MDVKSAFLNGYLN EVYVAQPKGFVD EHPKHVYKLNKALYGLKQAPRAWY+RL+VYLRGRGYSRGEIDKTLFIHRKSDQL                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------ESAGPVSSTVHAHRASEAT----------VSD
                                                                            ESA PVS TVHAHRA EAT          +  
Subjt:  --------------------------------------------------------------------ESAGPVSSTVHAHRASEAT----------VSD

Query:  IDLDDQDN-------VSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATT-AHKKQT-------------------DGRPESSKGPKPP
          +  Q++       +  + DPR SPA+ S HSPSVHPS SKLPT QPD V AHI EIAT  A   QT                   +GR +S KGPKPP
Subjt:  IDLDDQDN-------VSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATT-AHKKQT-------------------DGRPESSKGPKPP

Query:  KRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMIN-------
        KRK QQ RRNVT K G+KKIPANVPSVPID ISFHH+ESVQ WKFVM+RRIIDELI+EFIVNLPDEFND SSA+YQTVH R FKFVIS A+IN       
Subjt:  KRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMIN-------

Query:  --------------------GTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPI
                            GTLSTWPVNGIPAAAL +KYAILHKIGI NWFPS HASSISAALGTF+YQI NDDKVDTG FIYNQLLRHVGSF VKVPI
Subjt:  --------------------GTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPI

Query:  AFLRLFSS-----HGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSL
        AF RLFSS     +G VLT  DA  PEPKTIAL YRLFQGSH+PDIDHDVHPTQG  IFDTTDWDDS +GFYV+RELA RIINSL
Subjt:  AFLRLFSS-----HGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSL

KAA0053128.1 uncharacterized protein E6C27_scaffold778G00640 [Cucumis melo var. makuwa]2.4e-21379.51Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------

Query:  -------------------ESAGPVSSTVHAHRASEATVSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQ
                           ES  PVSSTVHAHRASEAT SD+D DDQDNVSLI+DPRRSPAVHS HSPSVHPSRSKLPTSQPDVVLAHIPEIATTA +KQ
Subjt:  -------------------ESAGPVSSTVHAHRASEATVSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQ

Query:  TD------------------GRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFN
        TD                  GRPESSKGPKPPKRK QQARRNVTIKTG+KKIPANVPSVPIDEISFHHEESVQCWKFVMQRRI DELIREFIVNLPDEFN
Subjt:  TD------------------GRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFN

Query:  DLSSANYQTVHIRVFKFVISPAMING--------------TLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGA
        DLSSANYQTVHI+ FKFVISPA+ING              TLSTWPVNGIPAAALRIKY ILHKIGIANWFPSSHASSISAALGTF+YQIFNDDKVD G+
Subjt:  DLSSANYQTVHIRVFKFVISPAMING--------------TLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGA

Query:  FIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAI
        FI NQLLRHVGSF VKVPIAFLRLFSSHGAVLTVFDA RP+PKTIALSYRLFQ SHVPDIDHDVHPT+G RIFDTTDWDDST+GFYVD+  A+
Subjt:  FIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAI

TYJ95503.1 uncharacterized protein E5676_scaffold441G00250 [Cucumis melo var. makuwa]6.8e-21380.37Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------

Query:  -------------------ESAGPVSSTVHAHRASEATVSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH---
                           ES  PVSSTVHAHRASEAT SD+D DDQDNVSLI+DPRRSPAVHS HSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH   
Subjt:  -------------------ESAGPVSSTVHAHRASEATVSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH---

Query:  ------KKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQT
                 ++GRPESSKGPKPPKRK QQARRNVTIKTG+KKIPANVPSVPIDEISFHHEESVQCWKFVMQRRI DELIREFIVNLPDEFNDLSSANYQT
Subjt:  ------KKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQT

Query:  VHIRVFKFVISPAMING--------------TLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRH
        VHI+ FKFVISPA+ING              TLSTWPVNGIPAAALRIKY ILHKIGIANWFPSSHASSISAALGTF+YQIFNDDKVD G+FI NQLLRH
Subjt:  VHIRVFKFVISPAMING--------------TLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRH

Query:  VGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAI
        VGSF VKVPIAFLRLFSSHGAVLTVFDA RP+PKTIALSYRLFQ SHVPDIDHDVHPT+G RIFDTTDWDDST+GFYVD+  A+
Subjt:  VGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAI

TYK30437.1 F5J5.1 [Cucumis melo var. makuwa]9.7e-15951.25Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------
        MDVKSAFLNGYLN EVYVAQPKGFVD EHPKHVYKLNKALYGLKQAPRAWY+RL+VYLRGRGYSRGEIDKTLFIHRKSDQL                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------ESAGPVSSTVHAHRASEAT----------VSD
                                                                            ESA PVS TVHAHRA EAT          +  
Subjt:  --------------------------------------------------------------------ESAGPVSSTVHAHRASEAT----------VSD

Query:  IDLDDQDN-------VSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH--------------KKQTDGRPESSKGPKPPKRKNQQ
          +  Q++       +  + DPR SPA+ S HSPSVHPS SKLPT QPD V AHI EIAT                    ++GR +S KGPKPPKRK QQ
Subjt:  IDLDDQDN-------VSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH--------------KKQTDGRPESSKGPKPPKRKNQQ

Query:  ARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMIN-------------
         RRNVT K G+KKIPANVPSVPID ISFHH+ESVQ WKFVM+RRIIDELI+EFIVNLPDEFND SSA+YQTVH R FKFVIS A+IN             
Subjt:  ARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMIN-------------

Query:  --------------GTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPIAFLRLF
                      GTLSTWPVNGIPAAAL +KYAILHKIGI NWFPS HASSISAALGTF+YQI NDDKVDTG FIYNQLLRHVGSF VKVPIAF RLF
Subjt:  --------------GTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPIAFLRLF

Query:  SS-----HGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSL
        SS     +G VLT  DA  PEPKTIAL YRLFQGSH+PDIDHDVHPTQG  IFDTTDWDDS +GFYV+RELA RIINSL
Subjt:  SS-----HGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSL

XP_008454678.1 PREDICTED: uncharacterized protein LOC103495034 [Cucumis melo]5.4e-23493.79Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLESAGPVSSTVHAHRASEAT
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLES  PVSSTVHAHRASEAT
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLESAGPVSSTVHAHRASEAT

Query:  VSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANV
         SD+D DDQDNVSLI+DPRRSPAVHS HSPSVHPSRSKLPTSQPDVVLAHIPEIATTA +KQTDGRPESSKGPKPPKRK QQARRNVTIKTG+KKIPANV
Subjt:  VSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANV

Query:  PSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMINGTLSTWPVNGIPAAALRIKYAILHKIGIANW
        PSVPIDEISFHHEESVQCWKFVMQRRI DELIREFIVNLPDEFNDLSSANYQTVHI+ FKFVISPA+INGTLSTWPVNGIPAAALRIKY ILHKIGIANW
Subjt:  PSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMINGTLSTWPVNGIPAAALRIKYAILHKIGIANW

Query:  FPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGR
        FPSSHASSISAALGTF+YQIFNDDKVD G+FI NQLLRHVGSF VKVPIAFLRLFSSHGAVLTVFDA RP+PKTIALSYRLFQ SHVPDIDHDVHPT+G 
Subjt:  FPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGR

Query:  RIFDTTDWDDSTKGFYVDRELAIRIINSLIVNLVH
        RIFDTTDWDDST+GFYVDRELAIRIINSLIVNLVH
Subjt:  RIFDTTDWDDSTKGFYVDRELAIRIINSLIVNLVH

TrEMBL top hitse value%identityAlignment
A0A1S3BZY6 uncharacterized protein LOC1034950342.6e-23493.79Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLESAGPVSSTVHAHRASEAT
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLES  PVSSTVHAHRASEAT
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLESAGPVSSTVHAHRASEAT

Query:  VSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANV
         SD+D DDQDNVSLI+DPRRSPAVHS HSPSVHPSRSKLPTSQPDVVLAHIPEIATTA +KQTDGRPESSKGPKPPKRK QQARRNVTIKTG+KKIPANV
Subjt:  VSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANV

Query:  PSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMINGTLSTWPVNGIPAAALRIKYAILHKIGIANW
        PSVPIDEISFHHEESVQCWKFVMQRRI DELIREFIVNLPDEFNDLSSANYQTVHI+ FKFVISPA+INGTLSTWPVNGIPAAALRIKY ILHKIGIANW
Subjt:  PSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMINGTLSTWPVNGIPAAALRIKYAILHKIGIANW

Query:  FPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGR
        FPSSHASSISAALGTF+YQIFNDDKVD G+FI NQLLRHVGSF VKVPIAFLRLFSSHGAVLTVFDA RP+PKTIALSYRLFQ SHVPDIDHDVHPT+G 
Subjt:  FPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGR

Query:  RIFDTTDWDDSTKGFYVDRELAIRIINSLIVNLVH
        RIFDTTDWDDST+GFYVDRELAIRIINSLIVNLVH
Subjt:  RIFDTTDWDDSTKGFYVDRELAIRIINSLIVNLVH

A0A5A7T169 F5J5.12.3e-15851.24Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------
        MDVKSAFLNGYLN EVYVAQPKGFVD EHPKHVYKLNKALYGLKQAPRAWY+RL+VYLRGRGYSRGEIDKTLFIHRKSDQL                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------ESAGPVSSTVHAHRASEAT----------VSD
                                                                            ESA PVS TVHAHRA EAT          +  
Subjt:  --------------------------------------------------------------------ESAGPVSSTVHAHRASEAT----------VSD

Query:  IDLDDQDN-------VSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATT-AHKKQT-------------------DGRPESSKGPKPP
          +  Q++       +  + DPR SPA+ S HSPSVHPS SKLPT QPD V AHI EIAT  A   QT                   +GR +S KGPKPP
Subjt:  IDLDDQDN-------VSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATT-AHKKQT-------------------DGRPESSKGPKPP

Query:  KRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMIN-------
        KRK QQ RRNVT K G+KKIPANVPSVPID ISFHH+ESVQ WKFVM+RRIIDELI+EFIVNLPDEFND SSA+YQTVH R FKFVIS A+IN       
Subjt:  KRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMIN-------

Query:  --------------------GTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPI
                            GTLSTWPVNGIPAAAL +KYAILHKIGI NWFPS HASSISAALGTF+YQI NDDKVDTG FIYNQLLRHVGSF VKVPI
Subjt:  --------------------GTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPI

Query:  AFLRLFSS-----HGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSL
        AF RLFSS     +G VLT  DA  PEPKTIAL YRLFQGSH+PDIDHDVHPTQG  IFDTTDWDDS +GFYV+RELA RIINSL
Subjt:  AFLRLFSS-----HGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSL

A0A5A7UD93 Reverse transcriptase Ty1/copia-type domain-containing protein1.1e-21379.51Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------

Query:  -------------------ESAGPVSSTVHAHRASEATVSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQ
                           ES  PVSSTVHAHRASEAT SD+D DDQDNVSLI+DPRRSPAVHS HSPSVHPSRSKLPTSQPDVVLAHIPEIATTA +KQ
Subjt:  -------------------ESAGPVSSTVHAHRASEATVSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQ

Query:  TD------------------GRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFN
        TD                  GRPESSKGPKPPKRK QQARRNVTIKTG+KKIPANVPSVPIDEISFHHEESVQCWKFVMQRRI DELIREFIVNLPDEFN
Subjt:  TD------------------GRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFN

Query:  DLSSANYQTVHIRVFKFVISPAMING--------------TLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGA
        DLSSANYQTVHI+ FKFVISPA+ING              TLSTWPVNGIPAAALRIKY ILHKIGIANWFPSSHASSISAALGTF+YQIFNDDKVD G+
Subjt:  DLSSANYQTVHIRVFKFVISPAMING--------------TLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGA

Query:  FIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAI
        FI NQLLRHVGSF VKVPIAFLRLFSSHGAVLTVFDA RP+PKTIALSYRLFQ SHVPDIDHDVHPT+G RIFDTTDWDDST+GFYVD+  A+
Subjt:  FIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAI

A0A5D3B898 Reverse transcriptase Ty1/copia-type domain-containing protein3.3e-21380.37Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------

Query:  -------------------ESAGPVSSTVHAHRASEATVSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH---
                           ES  PVSSTVHAHRASEAT SD+D DDQDNVSLI+DPRRSPAVHS HSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH   
Subjt:  -------------------ESAGPVSSTVHAHRASEATVSDIDLDDQDNVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH---

Query:  ------KKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQT
                 ++GRPESSKGPKPPKRK QQARRNVTIKTG+KKIPANVPSVPIDEISFHHEESVQCWKFVMQRRI DELIREFIVNLPDEFNDLSSANYQT
Subjt:  ------KKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQT

Query:  VHIRVFKFVISPAMING--------------TLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRH
        VHI+ FKFVISPA+ING              TLSTWPVNGIPAAALRIKY ILHKIGIANWFPSSHASSISAALGTF+YQIFNDDKVD G+FI NQLLRH
Subjt:  VHIRVFKFVISPAMING--------------TLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRH

Query:  VGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAI
        VGSF VKVPIAFLRLFSSHGAVLTVFDA RP+PKTIALSYRLFQ SHVPDIDHDVHPT+G RIFDTTDWDDST+GFYVD+  A+
Subjt:  VGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAI

A0A5D3E2Y4 F5J5.14.7e-15951.25Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------
        MDVKSAFLNGYLN EVYVAQPKGFVD EHPKHVYKLNKALYGLKQAPRAWY+RL+VYLRGRGYSRGEIDKTLFIHRKSDQL                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL-------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------ESAGPVSSTVHAHRASEAT----------VSD
                                                                            ESA PVS TVHAHRA EAT          +  
Subjt:  --------------------------------------------------------------------ESAGPVSSTVHAHRASEAT----------VSD

Query:  IDLDDQDN-------VSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH--------------KKQTDGRPESSKGPKPPKRKNQQ
          +  Q++       +  + DPR SPA+ S HSPSVHPS SKLPT QPD V AHI EIAT                    ++GR +S KGPKPPKRK QQ
Subjt:  IDLDDQDN-------VSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAH--------------KKQTDGRPESSKGPKPPKRKNQQ

Query:  ARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMIN-------------
         RRNVT K G+KKIPANVPSVPID ISFHH+ESVQ WKFVM+RRIIDELI+EFIVNLPDEFND SSA+YQTVH R FKFVIS A+IN             
Subjt:  ARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWKFVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMIN-------------

Query:  --------------GTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPIAFLRLF
                      GTLSTWPVNGIPAAAL +KYAILHKIGI NWFPS HASSISAALGTF+YQI NDDKVDTG FIYNQLLRHVGSF VKVPIAF RLF
Subjt:  --------------GTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGAFIYNQLLRHVGSFWVKVPIAFLRLF

Query:  SS-----HGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSL
        SS     +G VLT  DA  PEPKTIAL YRLFQGSH+PDIDHDVHPTQG  IFDTTDWDDS +GFYV+RELA RIINSL
Subjt:  SS-----HGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSL

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.6e-1043.04Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSD
        MDVK+AFLNG L EE+Y+  P+G   S +  +V KLNKA+YGLKQA R W++     L+   +    +D+ ++I  K +
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSD

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-1244.3Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSD
        +DVK+AFL+G L EE+Y+ QP+GF  +     V KLNK+LYGLKQAPR WY +   +++ + Y +   D  ++  R S+
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSD

P25600 Putative transposon Ty5-1 protein YCL074W1.9e-1139.13Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLESAGPVSSTVH
        MDV +AFLN  ++E +YV QP GFV+  +P +V++L   +YGLKQAP  W + ++  L+  G+ R E +  L+    SD     GP+   V+
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLESAGPVSSTVH

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.5e-1648.15Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL
        +DV +AFL G L ++VY++QP GF+D + P +V KL KALYGLKQAPRAWY  L  YL   G+     D +LF+ ++   +
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-1552.7Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFI
        +DV +AFL G L +EVY++QP GFVD + P +V +L KA+YGLKQAPRAWY  L  YL   G+     D +LF+
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.2e-1143.59Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFV----DSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFI
        +D+ +AFLNG L+EE+Y+  P G+     DS  P  V  L K++YGLKQA R W+ + SV L G G+ +   D T F+
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFV----DSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTAAAGAGTGCCTTCTTAAATGGGTACTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTAGATTCCGAGCACCCAAAGCATGTGTATAAGCTCAA
CAAAGCCTTATATGGACTAAAGCAAGCTCCAAGAGCTTGGTATGACCGCCTATCTGTATACTTGAGGGGTAGAGGATATTCTAGAGGAGAAATTGACAAGACCTTGTTCA
TACACAGGAAATCTGACCAACTGGAGTCTGCTGGTCCTGTTTCTTCTACTGTGCATGCACATCGAGCTTCTGAGGCCACTGTATCGGATATAGATTTAGATGATCAGGAT
AATGTTTCGTTAATCCAAGACCCTCGACGCTCACCAGCTGTACATTCAGATCATTCTCCCTCTGTTCACCCTTCTCGATCGAAACTACCTACTTCTCAACCAGATGTGGT
GCTTGCACACATTCCTGAAATCGCAACTACTGCACATAAGAAACAGACCGATGGAAGGCCAGAGTCTTCTAAAGGTCCTAAGCCCCCGAAAAGAAAAAATCAACAGGCTA
GGAGAAATGTTACCATAAAAACTGGTAAAAAGAAAATCCCTGCAAATGTTCCATCTGTTCCCATTGATGAAATTTCTTTTCATCACGAGGAAAGCGTTCAATGTTGGAAG
TTTGTGATGCAGAGGAGAATTATCGATGAGTTAATTAGAGAATTTATTGTCAATCTACCTGATGAGTTTAATGATCTGAGTAGTGCTAACTATCAGACGGTGCATATTAG
AGTGTTCAAATTTGTGATTTCACCTGCTATGATAAATGGGACCTTGTCCACATGGCCTGTGAATGGAATCCCTGCAGCTGCTCTCAGGATCAAGTATGCCATTCTGCACA
AGATTGGCATTGCCAATTGGTTCCCTTCGTCACATGCCTCAAGCATATCTGCTGCCTTAGGTACATTCATGTATCAAATTTTCAATGATGATAAAGTAGATACGGGTGCC
TTTATTTACAATCAACTATTGAGGCATGTTGGGTCGTTTTGGGTCAAGGTTCCCATTGCTTTTCTGAGGTTGTTCTCCAGTCATGGAGCGGTGCTTACTGTATTTGATGC
TTCTAGACCTGAACCTAAGACAATTGCACTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGCATCCAACTCAGGGCCGACGTATTTTTG
ACACTACTGACTGGGATGACTCTACTAAAGGCTTCTATGTGGATCGTGAGTTAGCTATCCGCATTATTAATTCCTTGATTGTGAATCTCGTGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTAAAGAGTGCCTTCTTAAATGGGTACTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTAGATTCCGAGCACCCAAAGCATGTGTATAAGCTCAA
CAAAGCCTTATATGGACTAAAGCAAGCTCCAAGAGCTTGGTATGACCGCCTATCTGTATACTTGAGGGGTAGAGGATATTCTAGAGGAGAAATTGACAAGACCTTGTTCA
TACACAGGAAATCTGACCAACTGGAGTCTGCTGGTCCTGTTTCTTCTACTGTGCATGCACATCGAGCTTCTGAGGCCACTGTATCGGATATAGATTTAGATGATCAGGAT
AATGTTTCGTTAATCCAAGACCCTCGACGCTCACCAGCTGTACATTCAGATCATTCTCCCTCTGTTCACCCTTCTCGATCGAAACTACCTACTTCTCAACCAGATGTGGT
GCTTGCACACATTCCTGAAATCGCAACTACTGCACATAAGAAACAGACCGATGGAAGGCCAGAGTCTTCTAAAGGTCCTAAGCCCCCGAAAAGAAAAAATCAACAGGCTA
GGAGAAATGTTACCATAAAAACTGGTAAAAAGAAAATCCCTGCAAATGTTCCATCTGTTCCCATTGATGAAATTTCTTTTCATCACGAGGAAAGCGTTCAATGTTGGAAG
TTTGTGATGCAGAGGAGAATTATCGATGAGTTAATTAGAGAATTTATTGTCAATCTACCTGATGAGTTTAATGATCTGAGTAGTGCTAACTATCAGACGGTGCATATTAG
AGTGTTCAAATTTGTGATTTCACCTGCTATGATAAATGGGACCTTGTCCACATGGCCTGTGAATGGAATCCCTGCAGCTGCTCTCAGGATCAAGTATGCCATTCTGCACA
AGATTGGCATTGCCAATTGGTTCCCTTCGTCACATGCCTCAAGCATATCTGCTGCCTTAGGTACATTCATGTATCAAATTTTCAATGATGATAAAGTAGATACGGGTGCC
TTTATTTACAATCAACTATTGAGGCATGTTGGGTCGTTTTGGGTCAAGGTTCCCATTGCTTTTCTGAGGTTGTTCTCCAGTCATGGAGCGGTGCTTACTGTATTTGATGC
TTCTAGACCTGAACCTAAGACAATTGCACTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGCATCCAACTCAGGGCCGACGTATTTTTG
ACACTACTGACTGGGATGACTCTACTAAAGGCTTCTATGTGGATCGTGAGTTAGCTATCCGCATTATTAATTCCTTGATTGTGAATCTCGTGCACTGA
Protein sequenceShow/hide protein sequence
MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLSVYLRGRGYSRGEIDKTLFIHRKSDQLESAGPVSSTVHAHRASEATVSDIDLDDQD
NVSLIQDPRRSPAVHSDHSPSVHPSRSKLPTSQPDVVLAHIPEIATTAHKKQTDGRPESSKGPKPPKRKNQQARRNVTIKTGKKKIPANVPSVPIDEISFHHEESVQCWK
FVMQRRIIDELIREFIVNLPDEFNDLSSANYQTVHIRVFKFVISPAMINGTLSTWPVNGIPAAALRIKYAILHKIGIANWFPSSHASSISAALGTFMYQIFNDDKVDTGA
FIYNQLLRHVGSFWVKVPIAFLRLFSSHGAVLTVFDASRPEPKTIALSYRLFQGSHVPDIDHDVHPTQGRRIFDTTDWDDSTKGFYVDRELAIRIINSLIVNLVH