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Pay0004372 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004372
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTranslation initiation factor IF-2
Genome locationchr08:18229719..18231194
RNA-Seq ExpressionPay0004372
SyntenyPay0004372
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR015760 - Translation initiation factor IF- 2
IPR023115 - Translation initiation factor IF- 2, domain 3
IPR036925 - Translation initiation factor IF-2, domain 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041213.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]8.7e-4382.79Show/hide
Query:  TEEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVE----------------EKIPIGSVEVCAVFSSGSG
        TEEIDE     VASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVE                EKIPIGSVEVCAVFSSGSG
Subjt:  TEEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVE----------------EKIPIGSVEVCAVFSSGSG

Query:  LVAGCMIVERKLVKGCGIEEWL
        LVAGCMIVERKLVKGCGIEEWL
Subjt:  LVAGCMIVERKLVKGCGIEEWL

KAA0052295.1 translation initiation factor IF-2 [Cucumis melo var. makuwa]2.9e-3889.58Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        D DLAVASKAIVLGFNVKASGS+K YA+NKGVEIRLYRVIYELIDDVRNAMEG LEPVEEK+PIGS EV AVFSSGSGLVAGCM+VE KLVKGCGI
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

TYK01860.1 translation initiation factor IF-2 [Cucumis melo var. makuwa]2.9e-3889.58Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        D DLAVASKAIVLGFNVKASGS+K YA+NKGVEIRLYRVIYELIDDVRNAMEG LEPVEEK+PIGS EV AVFSSGSGLVAGCM+VE KLVKGCGI
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

XP_008444270.1 PREDICTED: translation initiation factor IF-2, chloroplastic [Cucumis melo]2.9e-3889.58Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        D DLAVASKAIVLGFNVKASGS+K YA+NKGVEIRLYRVIYELIDDVRNAMEG LEPVEEK+PIGS EV AVFSSGSGLVAGCM+VE KLVKGCGI
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

XP_031739767.1 translation initiation factor IF-2, chloroplastic isoform X1 [Cucumis sativus]4.9e-3887.63Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGIE
        D DLAVASKAIVLGFNVKA GS+K YA+NKGVEIRLYRVIYELIDDVRNAMEG LEPVEEK+PIGS EV AVFSSGSGLVAGCM+VE KLVKGCGI+
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGIE

TrEMBL top hitse value%identityAlignment
A0A0A0L611 Tr-type G domain-containing protein2.4e-3887.63Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGIE
        D DLAVASKAIVLGFNVKA GS+K YA+NKGVEIRLYRVIYELIDDVRNAMEG LEPVEEK+PIGS EV AVFSSGSGLVAGCM+VE KLVKGCGI+
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGIE

A0A1S3B9Y9 translation initiation factor IF-2, chloroplastic1.4e-3889.58Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        D DLAVASKAIVLGFNVKASGS+K YA+NKGVEIRLYRVIYELIDDVRNAMEG LEPVEEK+PIGS EV AVFSSGSGLVAGCM+VE KLVKGCGI
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

A0A5A7UEZ3 Translation initiation factor IF-21.4e-3889.58Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        D DLAVASKAIVLGFNVKASGS+K YA+NKGVEIRLYRVIYELIDDVRNAMEG LEPVEEK+PIGS EV AVFSSGSGLVAGCM+VE KLVKGCGI
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

A0A5D3BRX7 Translation initiation factor IF-21.4e-3889.58Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        D DLAVASKAIVLGFNVKASGS+K YA+NKGVEIRLYRVIYELIDDVRNAMEG LEPVEEK+PIGS EV AVFSSGSGLVAGCM+VE KLVKGCGI
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

A0A5D3D036 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.2e-4382.79Show/hide
Query:  TEEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVE----------------EKIPIGSVEVCAVFSSGSG
        TEEIDE     VASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVE                EKIPIGSVEVCAVFSSGSG
Subjt:  TEEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVE----------------EKIPIGSVEVCAVFSSGSG

Query:  LVAGCMIVERKLVKGCGIEEWL
        LVAGCMIVERKLVKGCGIEEWL
Subjt:  LVAGCMIVERKLVKGCGIEEWL

SwissProt top hitse value%identityAlignment
B8HUA9 Translation initiation factor IF-22.6e-1845.54Show/hide
Query:  EEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCG
        E  + D DLA AS A+V+GFN   +   +  A   GV+IR Y +IY+L+DD+  AMEG LEP   + P+G  +V AVF  G G VAGC +   KL++ C 
Subjt:  EEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCG

Query:  I
        I
Subjt:  I

P57997 Translation initiation factor IF-2, chloroplastic7.1e-3272.92Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        D DLAVASKAI++GFN    GS+K YA NK VEIRLYRVIYELIDDVR AMEG LEPVEE++ IGS  V AVFSSGSG VAGCM+ E K++K CGI
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

Q10XM3 Translation initiation factor IF-27.7e-1843.56Show/hide
Query:  EEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCG
        E  + D DLA AS+A+++GFN   +   +  A   GV++R Y VIY+L+DD++ AMEG L+P   + P+G VEV AVF+   G VAGC ++  K+V+ C 
Subjt:  EEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCG

Query:  I
        +
Subjt:  I

Q2RJM5 Translation initiation factor IF-24.5e-1851.61Show/hide
Query:  DEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFS-SGSGLVAGCMIVERKL
        + D  LA ASKAI++GFNV+   +++  A+  GVEIRLYRVIYE+IDDV+ AM G LEP E ++ +G  EV A F    +G VAGC + E K+
Subjt:  DEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFS-SGSGLVAGCMIVERKL

Q9SHI1 Translation initiation factor IF-2, chloroplastic7.6e-3477.55Show/hide
Query:  DEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        + D DLA AS+AIV GFNVKASGS+K  A+NKGVEIRLYRVIYELIDDVRNAMEG LE VEE+IPIGS EV A FSSGSG VAGCM+ E K VK CGI
Subjt:  DEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

Arabidopsis top hitse value%identityAlignment
AT1G17220.1 Translation initiation factor 2, small GTP-binding protein5.4e-3577.55Show/hide
Query:  DEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI
        + D DLA AS+AIV GFNVKASGS+K  A+NKGVEIRLYRVIYELIDDVRNAMEG LE VEE+IPIGS EV A FSSGSG VAGCM+ E K VK CGI
Subjt:  DEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGI

AT4G11160.1 Translation initiation factor 2, small GTP-binding protein1.8e-0630Show/hide
Query:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVF-------SSGSGL-VAGCMIVERKLVK
        D DLA A  A ++GFNVK   +  + A    V++  +RVIY L++D+ N +      V E    G  EV ++F       +   G+ +AGC +++ ++ +
Subjt:  DFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVF-------SSGSGL-VAGCMIVERKLVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAAGAAATTAACAGGACTGAAGAAATTGATGAAGATTTTGATCTTGCAGTTGCAAGCAAAGCCATAGTTTTAGGGTTTAATGTTAAAGCATCAGGTTCTATCAA
GATTTATGCAAAAAATAAAGGTGTCGAGATCAGGCTGTATAGAGTTATCTACGAGCTTATTGATGATGTTCGGAATGCAATGGAAGGACCCCTAGAACCTGTAGAGGAAA
AAATACCAATAGGGTCAGTAGAAGTCTGTGCAGTATTCAGTAGTGGCAGTGGTCTTGTTGCTGGATGCATGATAGTAGAAAGAAAACTGGTAAAGGGCTGTGGCATTGAG
GAATGGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGAAGAAATTAACAGGACTGAAGAAATTGATGAAGATTTTGATCTTGCAGTTGCAAGCAAAGCCATAGTTTTAGGGTTTAATGTTAAAGCATCAGGTTCTATCAA
GATTTATGCAAAAAATAAAGGTGTCGAGATCAGGCTGTATAGAGTTATCTACGAGCTTATTGATGATGTTCGGAATGCAATGGAAGGACCCCTAGAACCTGTAGAGGAAA
AAATACCAATAGGGTCAGTAGAAGTCTGTGCAGTATTCAGTAGTGGCAGTGGTCTTGTTGCTGGATGCATGATAGTAGAAAGAAAACTGGTAAAGGGCTGTGGCATTGAG
GAATGGTTGTAA
Protein sequenceShow/hide protein sequence
MTEEINRTEEIDEDFDLAVASKAIVLGFNVKASGSIKIYAKNKGVEIRLYRVIYELIDDVRNAMEGPLEPVEEKIPIGSVEVCAVFSSGSGLVAGCMIVERKLVKGCGIE
EWL