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Pay0004647 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004647
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr01:11909284..11910122
RNA-Seq ExpressionPay0004647
SyntenyPay0004647
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060670.1 retrotransposon protein [Cucumis melo var. makuwa]9.5e-6981.65Show/hide
Query:  KATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVV
        +ATKH+WTTIEDE LVEC LQLVEEG WR DNGTFK GYLKQYTAIAEMM P            CI+AEK VFDDWVKGHPNAQGLLNKPFPYFYDLE++
Subjt:  KATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVV

Query:  FGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT
        FGRDRATGGRCKTPVEM SQ ARDTEEDDMDINLE+FDI NPHGLEPPSGEDM STPT
Subjt:  FGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT

KAA0063789.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-6880.49Show/hide
Query:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYF
        MASTNSKATKH+WTTIEDE LVECLLQLVEEGGWRADN TFK GYL  YT IA+MM P            CIEAEK VFDDWVKGH NA+GLLNK FPYF
Subjt:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYF

Query:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT
        YDLEVVFGRDRAT GRCKTPV+M SQ A+DTEEDDMDINLEDFDIPNPHGL+PPSGEDM STPT
Subjt:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT

TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]6.8e-6760.26Show/hide
Query:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYL------------------------------KQYTAIAEMMGP------------
        MASTNSKATKHRWTTI+D+ LVECLLQLVEEGGWRA+N TFK  YL                              KQYTAIA+MMGP            
Subjt:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYL------------------------------KQYTAIAEMMGP------------

Query:  CIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIF
        CIEAEK VFDDWVKGHPNA+GLLNKPF YFYDLE+VFGRD+ATGGRCK  VEM+SQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPST    T   
Subjt:  CIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIF

Query:  RRPYGHVSRKYARNFQGNWKDCYMAERKNGNRII
                 K  R++ G+  D + A  +  ++ I
Subjt:  RRPYGHVSRKYARNFQGNWKDCYMAERKNGNRII

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]2.3e-8377.45Show/hide
Query:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYF
        MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP            CIE EKPVFDDWVKGHPNAQGLLNKPFPYF
Subjt:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYF

Query:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIFRRPYGHVSRKYARNFQGNWKDCYMAERKNG
        YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT  T            K  R++ G+  D + A  +  
Subjt:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIFRRPYGHVSRKYARNFQGNWKDCYMAERKNG

Query:  NRII
        ++ I
Subjt:  NRII

XP_008462939.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]6.5e-8679.6Show/hide
Query:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMG------------PCIEAEKPVFDDWVKGHPNAQGLLNKPFPYF
        MAST SKATKHRWTTIEDE LVECLLQLVEEGGWRADNGTFK GYLKQYTAIAEMMG             CIEAEK VFDDWVKGHPNA+ LLNKPFPYF
Subjt:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMG------------PCIEAEKPVFDDWVKGHPNAQGLLNKPFPYF

Query:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT-------------KKTIIFRRPYGHVSRKYARNFQG
        YDL++VFGRD ATG RCKTPVEM SQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT             KKT+IFR P+GH+SRKYARNFQG
Subjt:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT-------------KKTIIFRRPYGHVSRKYARNFQG

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A1S3CI24 uncharacterized protein At2g29880-like3.2e-8679.6Show/hide
Query:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMG------------PCIEAEKPVFDDWVKGHPNAQGLLNKPFPYF
        MAST SKATKHRWTTIEDE LVECLLQLVEEGGWRADNGTFK GYLKQYTAIAEMMG             CIEAEK VFDDWVKGHPNA+ LLNKPFPYF
Subjt:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMG------------PCIEAEKPVFDDWVKGHPNAQGLLNKPFPYF

Query:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT-------------KKTIIFRRPYGHVSRKYARNFQG
        YDL++VFGRD ATG RCKTPVEM SQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT             KKT+IFR P+GH+SRKYARNFQG
Subjt:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT-------------KKTIIFRRPYGHVSRKYARNFQG

Query:  N
        N
Subjt:  N

A0A5A7VE44 Retrotransposon protein1.7e-6880.49Show/hide
Query:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYF
        MASTNSKATKH+WTTIEDE LVECLLQLVEEGGWRADN TFK GYL  YT IA+MM P            CIEAEK VFDDWVKGH NA+GLLNK FPYF
Subjt:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYF

Query:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT
        YDLEVVFGRDRAT GRCKTPV+M SQ A+DTEEDDMDINLEDFDIPNPHGL+PPSGEDM STPT
Subjt:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT

A0A5D3BC95 Retrotransposon protein3.3e-6760.26Show/hide
Query:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYL------------------------------KQYTAIAEMMGP------------
        MASTNSKATKHRWTTI+D+ LVECLLQLVEEGGWRA+N TFK  YL                              KQYTAIA+MMGP            
Subjt:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYL------------------------------KQYTAIAEMMGP------------

Query:  CIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIF
        CIEAEK VFDDWVKGHPNA+GLLNKPF YFYDLE+VFGRD+ATGGRCK  VEM+SQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPST    T   
Subjt:  CIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIF

Query:  RRPYGHVSRKYARNFQGNWKDCYMAERKNGNRII
                 K  R++ G+  D + A  +  ++ I
Subjt:  RRPYGHVSRKYARNFQGNWKDCYMAERKNGNRII

A0A5D3C7T4 Uncharacterized protein1.1e-8377.45Show/hide
Query:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYF
        MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP            CIE EKPVFDDWVKGHPNAQGLLNKPFPYF
Subjt:  MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYF

Query:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIFRRPYGHVSRKYARNFQGNWKDCYMAERKNG
        YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT  T            K  R++ G+  D + A  +  
Subjt:  YDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIFRRPYGHVSRKYARNFQGNWKDCYMAERKNG

Query:  NRII
        ++ I
Subjt:  NRII

A0A5D3DJR9 Retrotransposon protein4.6e-6981.65Show/hide
Query:  KATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVV
        +ATKH+WTTIEDE LVEC LQLVEEG WR DNGTFK GYLKQYTAIAEMM P            CI+AEK VFDDWVKGHPNAQGLLNKPFPYFYDLE++
Subjt:  KATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGP------------CIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVV

Query:  FGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT
        FGRDRATGGRCKTPVEM SQ ARDTEEDDMDINLE+FDI NPHGLEPPSGEDM STPT
Subjt:  FGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGTGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTGA
TAATGGAACATTCAAACTGGGATATTTGAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCATGCATTGAGGCAGAGAAACCCGTGTTCGATGATTGGGTTAAGGGAC
ACCCCAATGCTCAAGGCCTACTAAATAAACCATTTCCTTACTTCTATGACTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTGTTGAA
ATGAGCTCACAGACTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACAT
GCCATCTACTCCAACAAAAAAGACGATCATATTCAGGAGACCTTATGGACACGTTTCGCGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTACATGGCAG
AGAGAAAAAATGGAAATAGAATCATCCCTACACAAACGATTATATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGTGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTGA
TAATGGAACATTCAAACTGGGATATTTGAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCATGCATTGAGGCAGAGAAACCCGTGTTCGATGATTGGGTTAAGGGAC
ACCCCAATGCTCAAGGCCTACTAAATAAACCATTTCCTTACTTCTATGACTTGGAAGTTGTGTTTGGTAGAGATAGGGCTACTGGTGGTAGATGTAAGACACCTGTTGAA
ATGAGCTCACAGACTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAGACTTTGATATTCCAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACAT
GCCATCTACTCCAACAAAAAAGACGATCATATTCAGGAGACCTTATGGACACGTTTCGCGCAAGTATGCGAGAAACTTCCAAGGAAATTGGAAAGATTGCTACATGGCAG
AGAGAAAAAATGGAAATAGAATCATCCCTACACAAACGATTATATGCTGA
Protein sequenceShow/hide protein sequence
MASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGPCIEAEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVE
MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTKKTIIFRRPYGHVSRKYARNFQGNWKDCYMAERKNGNRIIPTQTIIC