| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 0.0e+00 | 80.7 | Show/hide |
Query: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
MR FN FI+DSNLIDPPLSNAKFTWSNLRV +LSRIDRFLYTT+WENLFTAHYSK + WGP PFK INVHLKEPWFKNNV N
Subjt: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
Query: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
WWKNLRQEGHPGFSFM+KLK LS IIR+EQ+KN SDE+K AWIKE+D+IDRLEAEGNLSEELSLRRT++KAD+L+ FKEAQIWYQKSKRLW TEGDE
Subjt: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
Query: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
NTSFFHKICSARQRRSIISNINS DGVPC+TNE+IAKAFLDHFE IY GGG E+PWLI+NL+WSPIST QAQNLCS FTEEEIH ALTAFSNNKSPGPDG
Subjt: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
Query: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
FTMEF+K+ W VLK++I NIFRDFH NCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLK+TLP VAENQ+AFVKGRQIIDAI
Subjt: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
Query: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYP KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDY+SR
Subjt: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
Query: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
LLNSVGE IKGVK+ N+NLTHLLFADDILLFVEDDEHS+QNLKNIINLFQLASGL+INLNKSTISPIN+DA+RT+QIASQW I+TKF PINYLGVPLGG
Subjt: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
Query: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG-----
KQ TK FWKN++EKI+KKLASWKYSMLSKGGKITLIKS+LASLPTYQLSIFKAPVSTCK IEK+WRNF WKNP ETHKLHLV+WAKITS KE+GG
Subjt: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG-----
Query: ----------------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFAL
SKGDIPCVCNHSSSRSPWFSICKGL WFQRHVSWKIKNGR+FSFWHSHWHQNSPLS HYPRL+AL
Subjt: ----------------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFAL
Query: STNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------K
STN++SSI+DMWN TLMDWDL PRRQLR+WEHPLWAELKNSLNASFCENG DSP W LNS+G Y+VAS K
Subjt: STNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------K
Query: CNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASA
C FFIWTLLYDSVNT EQL KR+PNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIW ISSHL+SNVNCLSPK LC TMCSWKQKTKKN+ILFNTYASA
Subjt: CNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASA
Query: LWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
LWNIWLERNARIFNGKEKTVA++WEDIKALAGLWTSRSSLF+NYQA+SIALNLNAFS
Subjt: LWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
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| TYK06777.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 0.0e+00 | 76.72 | Show/hide |
Query: MWDDLRFNVTDFIEGEYSLSININFPDGPSSSAWWLSAIYGPTGGRNRNSFWAELLDLKNKCSPT---------------------CKYSMRNFNNFISD
MWDDLRFNVTDFIEG +SLSININ PDGPS+SAWWLSAIYGP+GGRNR SFWAELLDLKNKCSPT K+SMR FN FI+D
Subjt: MWDDLRFNVTDFIEGEYSLSININFPDGPSSSAWWLSAIYGPTGGRNRNSFWAELLDLKNKCSPT---------------------CKYSMRNFNNFISD
Query: SNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRNWWKNLRQEGH
SNLIDPPLSNAKFTWSNLRV +LSRIDRFLYTT+WENLFTAHYSK + WGP PFK INVHLKEPWFKNN+ NWWKNLRQEGH
Subjt: SNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRNWWKNLRQEGH
Query: PGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICS
PGFSFM+KLK LS IIR+EQ+KN SDE+K AWIKE+D+IDRLEAEGNLSEELSLRRT++KAD+L FKEAQIWYQKSKRLW TEGDENTSFFHKICS
Subjt: PGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICS
Query: ARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAW
ARQRRSIISNINS DGVPC+TNE+IAKAFLDHFE IY GGG E+PWLI+NL+WSPIST QAQ LCS FTEEEIH ALTAFS+NKSP T
Subjt: ARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAW
Query: FVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW
++ +NITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLK+TLP VAENQ+AFVK RQIIDAILVANEAIDYW
Subjt: FVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW
Query: RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIK
R KKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYP KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE IK
Subjt: RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIK
Query: GVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGGKQTTKAFWKN
GVK+ N+NLTHLLFADDILLFVEDDEHS+QNLKNIINLFQLASGL+INLNKSTISPIN+DA+RT+QIASQW I+TKF PINYLGVPLGGKQTTKAFWKN
Subjt: GVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGGKQTTKAFWKN
Query: IDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG---------------
++EKI+KKLASWKYSMLSKGGKITLIKS+LASLPTYQLSIFKAPVSTCK IEK+WRNF WKNP ETHKLHLV+WAKITS KE+GG
Subjt: IDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG---------------
Query: ------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKD
SKGDIPCVCNHSSSRSPWFSICKGL WFQRHVSWKIKNGR+FSFWH HWHQNSPLS HYPRL+ALSTN++SSI+D
Subjt: ------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKD
Query: MWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLY
MWN TLMDWDL PRRQLR+WE PLWAELKNS+NASFCENG+DSP W LNS+G Y+VAS KC FFIWTLLY
Subjt: MWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLY
Query: DSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNA
DSVNT EQL KR+P LCSRPSWCVMCKRNDEDRIHLFILCPIAKSIW ISSHLNSNVNCLSPK LC TMCSWKQKTKKN+ILFNTYASALWNIWLERNA
Subjt: DSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNA
Query: RIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
RIFNGKEKTVA++WEDIKALAGLWTSRSSLF+NYQA+SIALNLNAFS
Subjt: RIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
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| TYK10356.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 0.0e+00 | 77.5 | Show/hide |
Query: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
MR FN FISDSNLIDPPLSNAK+TWSNL+ Q ILSRIDRFLYT DWENLFTAHYSK ++ WGPLPFK INVHLKEPWFKNN+RN
Subjt: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
Query: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
WW NLR EGHPGFSFMKKLK+LSVIIRDEQKKNNR +DE+KRAW+KEVDNIDRLEAEGNL EELSLRRTK KADILL DFK AQIWYQKSKRLWNTEGDE
Subjt: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
Query: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAK FLDHFEGIYNGGGVENPWLIENLSWSPIST+QAQNLCS F+EEEIH+ALTAFSNNKSPGPDG
Subjt: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
Query: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
FTMEFFKAAWFVLKDDIFNIFRDFH NCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPS VAENQ+AFVKGRQIIDAI
Subjt: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
Query: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
LVANEAIDYWRVKKIQGF GYPIKWRRWIKACISSVQYSIIINGRPR
Subjt: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
Query: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
EDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQW ITTKFFPINYLGVPLGG
Subjt: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
Query: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGD
K TTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVST K IEKSWRNFFWKN SETHKLHL
Subjt: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGD
Query: IPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELK
VSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQD+SIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELK
Subjt: IPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELK
Query: NSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRN
NSLNASFCENGRDSPTW+LNSDGFYSVAS KC FFIWTLLYDSVNT +QLTKRMPNLCSRPSWCVMCKRN
Subjt: NSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRN
Query: DEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSS
+EDRIHLFILCPIAKSIWNLISSHL SNVNCLSPK LC TMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSR
Subjt: DEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSS
Query: LFTNYQATSIALNLNAFS
LFTNYQATSIALNLNAF+
Subjt: LFTNYQATSIALNLNAFS
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| TYK24536.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 0.0e+00 | 66.88 | Show/hide |
Query: MWDDLRFNVTDFIEGEYSLSININFPDGPSSSAWWLSAIYGPTGGRNRNSFWAELLDLKNKCSPT---------------------CKYSMRNFNNFISD
MWDDLRF+VTD IEG +SLSININFPDGPSSSAWWLSAIYGP+GGRNR SFWAELLDLKNKCSPT K+SMR FN FISD
Subjt: MWDDLRFNVTDFIEGEYSLSININFPDGPSSSAWWLSAIYGPTGGRNRNSFWAELLDLKNKCSPT---------------------CKYSMRNFNNFISD
Query: SNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRNWWKNLRQEGH
SNLIDPPLSNAKFTWSNLRVQ +LSRIDRFLYT +WENLFTAHYSK + WGP PFKFINVHLKEPWFK NV WWKNLRQ GH
Subjt: SNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRNWWKNLRQEGH
Query: PGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICS
PGFSFMKKLK LS IIRDEQKKN +DEEK+AWIKE+DNIDRLEAEGN SEELSLRRTK+KAD+L+ FKEAQIWYQKSKRLW TEGDENTSFFHKICS
Subjt: PGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICS
Query: ARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAW
ARQRRSIISNINS DGVPC+TNE+IAKAFLDHFE IY GGG E+PWLI+NLSWSPISTTQAQNLCS FTEEEIH ALTAFSNNKSPGPDGFTMEF+K+ W
Subjt: ARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAW
Query: FVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW
VLK++IFNIFRDFH NCIINKAVN+TNIALIAKKEKCAEPADYRPI +AENQ+AFVKGRQIIDAILVANEAIDYW
Subjt: FVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW
Query: RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIK
RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYP +WR+WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE IK
Subjt: RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIK
Query: GVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGGKQTTKAFWKN
GVKM N+NLTHLLFADDILLFVEDDEHS+QNLKNIINLFQLASGL+INLNKSTISPIN+ AART+QIASQW I+TKF PINYLGVPLGGKQTTK+FWKN
Subjt: GVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGGKQTTKAFWKN
Query: IDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGDIPCVCNHSSS
++EKI+KKL SWKYSMLSKG A+ P +P + K W F
Subjt: IDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGDIPCVCNHSSS
Query: RSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCEN
+F + DSSI+DMWN TLMDWDL PRRQ+RDWE+PLWAELKNSLN SFCEN
Subjt: RSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCEN
Query: GRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFIL
G+DSPTW LNSDGFY+VAS KC FFIWTLLYDSVNT EQLTKRMPNLCSRPS
Subjt: GRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFIL
Query: CPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSI
WKQKTKKN+IL+NTYASALWNIWLERNARIFNGKEKTVA++WEDIKALAGLWTSRSSLFTNYQA+SI
Subjt: CPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSI
Query: ALNLNAFS
ALNLNAFS
Subjt: ALNLNAFS
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| XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo] | 0.0e+00 | 80.61 | Show/hide |
Query: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
MR FN FI+DSNLIDPPLSNAKFTWSNLRV +LSRIDRFLYTT+WENLFTAHYSK + WGP PFK INVHLKEPWFKNNV N
Subjt: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
Query: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
WWKNLRQEGHPGFSFM+KLK LS IIR+EQ+KN SDE+K AWIKE+D+IDRLEAEGNLSEELSLRRT++KAD+L+ FKEAQIWYQKSKRLW TEGDE
Subjt: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
Query: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
NTSFFHKICSARQRRSIISNINS DGVPC+TNE+IAKAFLDHFE IY GGG E+PWLI+NL+WSPIST QAQNLCS FTEEEIH ALTAFSNNKSPGPDG
Subjt: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
Query: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
FTMEF+K+ W VLK++I NIFRDFH NCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLK+TLP VAENQ+AFVKGRQIIDAI
Subjt: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
Query: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYP KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDY+SR
Subjt: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
Query: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
LLNSVGE IKGVK+ N+NLTHLLFADDILLFVEDDEHS+QNLKNIINLFQLASGL+INLNKSTISPIN+DA+RT+QIASQW I+TKF PINYLGVPLGG
Subjt: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
Query: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG-----
KQ TK FWKN++EKI+KKLASWKYSMLSKGGKITLIKS+LASLPTYQLSIFK PVSTCK IEK+WRNF WKNP ETHKLHLV+WAKITS KE+GG
Subjt: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG-----
Query: ----------------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFAL
SKGDIPCVCNHSSSRSPWFSICKGL WFQRHVSWKIKNGR+FSFWHSHWHQNSPLS HYPRL+AL
Subjt: ----------------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFAL
Query: STNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------K
STN++SSI+DMWN TLMDWDL PRRQLR+WEHPLWAELKNSLNASFCENG DSP W LNS+G Y+VAS K
Subjt: STNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------K
Query: CNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASA
C FFIWTLLYDSVNT EQL KR+PNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIW ISSHL+SNVNCLSPK LC TMCSWKQKTKKN+ILFNTYASA
Subjt: CNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASA
Query: LWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
LWNIWLERNARIFNGKEKTVA++WEDIKALAGLWTSRSSLF+NYQA+SIALNLNAFS
Subjt: LWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A1S4E2K5 LINE-1 retrotransposable element ORF2 protein | 0.0e+00 | 80.61 | Show/hide |
Query: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
MR FN FI+DSNLIDPPLSNAKFTWSNLRV +LSRIDRFLYTT+WENLFTAHYSK + WGP PFK INVHLKEPWFKNNV N
Subjt: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
Query: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
WWKNLRQEGHPGFSFM+KLK LS IIR+EQ+KN SDE+K AWIKE+D+IDRLEAEGNLSEELSLRRT++KAD+L+ FKEAQIWYQKSKRLW TEGDE
Subjt: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
Query: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
NTSFFHKICSARQRRSIISNINS DGVPC+TNE+IAKAFLDHFE IY GGG E+PWLI+NL+WSPIST QAQNLCS FTEEEIH ALTAFSNNKSPGPDG
Subjt: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
Query: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
FTMEF+K+ W VLK++I NIFRDFH NCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLK+TLP VAENQ+AFVKGRQIIDAI
Subjt: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
Query: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYP KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDY+SR
Subjt: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
Query: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
LLNSVGE IKGVK+ N+NLTHLLFADDILLFVEDDEHS+QNLKNIINLFQLASGL+INLNKSTISPIN+DA+RT+QIASQW I+TKF PINYLGVPLGG
Subjt: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
Query: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG-----
KQ TK FWKN++EKI+KKLASWKYSMLSKGGKITLIKS+LASLPTYQLSIFK PVSTCK IEK+WRNF WKNP ETHKLHLV+WAKITS KE+GG
Subjt: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG-----
Query: ----------------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFAL
SKGDIPCVCNHSSSRSPWFSICKGL WFQRHVSWKIKNGR+FSFWHSHWHQNSPLS HYPRL+AL
Subjt: ----------------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFAL
Query: STNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------K
STN++SSI+DMWN TLMDWDL PRRQLR+WEHPLWAELKNSLNASFCENG DSP W LNS+G Y+VAS K
Subjt: STNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------K
Query: CNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASA
C FFIWTLLYDSVNT EQL KR+PNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIW ISSHL+SNVNCLSPK LC TMCSWKQKTKKN+ILFNTYASA
Subjt: CNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASA
Query: LWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
LWNIWLERNARIFNGKEKTVA++WEDIKALAGLWTSRSSLF+NYQA+SIALNLNAFS
Subjt: LWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
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| A0A5D3C4J1 LINE-1 retrotransposable element ORF2 protein | 0.0e+00 | 76.72 | Show/hide |
Query: MWDDLRFNVTDFIEGEYSLSININFPDGPSSSAWWLSAIYGPTGGRNRNSFWAELLDLKNKCSPT---------------------CKYSMRNFNNFISD
MWDDLRFNVTDFIEG +SLSININ PDGPS+SAWWLSAIYGP+GGRNR SFWAELLDLKNKCSPT K+SMR FN FI+D
Subjt: MWDDLRFNVTDFIEGEYSLSININFPDGPSSSAWWLSAIYGPTGGRNRNSFWAELLDLKNKCSPT---------------------CKYSMRNFNNFISD
Query: SNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRNWWKNLRQEGH
SNLIDPPLSNAKFTWSNLRV +LSRIDRFLYTT+WENLFTAHYSK + WGP PFK INVHLKEPWFKNN+ NWWKNLRQEGH
Subjt: SNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRNWWKNLRQEGH
Query: PGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICS
PGFSFM+KLK LS IIR+EQ+KN SDE+K AWIKE+D+IDRLEAEGNLSEELSLRRT++KAD+L FKEAQIWYQKSKRLW TEGDENTSFFHKICS
Subjt: PGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICS
Query: ARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAW
ARQRRSIISNINS DGVPC+TNE+IAKAFLDHFE IY GGG E+PWLI+NL+WSPIST QAQ LCS FTEEEIH ALTAFS+NKSP T
Subjt: ARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAW
Query: FVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW
++ +NITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLK+TLP VAENQ+AFVK RQIIDAILVANEAIDYW
Subjt: FVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW
Query: RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIK
R KKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYP KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE IK
Subjt: RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIK
Query: GVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGGKQTTKAFWKN
GVK+ N+NLTHLLFADDILLFVEDDEHS+QNLKNIINLFQLASGL+INLNKSTISPIN+DA+RT+QIASQW I+TKF PINYLGVPLGGKQTTKAFWKN
Subjt: GVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGGKQTTKAFWKN
Query: IDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG---------------
++EKI+KKLASWKYSMLSKGGKITLIKS+LASLPTYQLSIFKAPVSTCK IEK+WRNF WKNP ETHKLHLV+WAKITS KE+GG
Subjt: IDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG---------------
Query: ------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKD
SKGDIPCVCNHSSSRSPWFSICKGL WFQRHVSWKIKNGR+FSFWH HWHQNSPLS HYPRL+ALSTN++SSI+D
Subjt: ------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKD
Query: MWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLY
MWN TLMDWDL PRRQLR+WE PLWAELKNS+NASFCENG+DSP W LNS+G Y+VAS KC FFIWTLLY
Subjt: MWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLY
Query: DSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNA
DSVNT EQL KR+P LCSRPSWCVMCKRNDEDRIHLFILCPIAKSIW ISSHLNSNVNCLSPK LC TMCSWKQKTKKN+ILFNTYASALWNIWLERNA
Subjt: DSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNA
Query: RIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
RIFNGKEKTVA++WEDIKALAGLWTSRSSLF+NYQA+SIALNLNAFS
Subjt: RIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
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| A0A5D3CJ08 LINE-1 retrotransposable element ORF2 protein | 0.0e+00 | 77.5 | Show/hide |
Query: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
MR FN FISDSNLIDPPLSNAK+TWSNL+ Q ILSRIDRFLYT DWENLFTAHYSK ++ WGPLPFK INVHLKEPWFKNN+RN
Subjt: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
Query: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
WW NLR EGHPGFSFMKKLK+LSVIIRDEQKKNNR +DE+KRAW+KEVDNIDRLEAEGNL EELSLRRTK KADILL DFK AQIWYQKSKRLWNTEGDE
Subjt: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
Query: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAK FLDHFEGIYNGGGVENPWLIENLSWSPIST+QAQNLCS F+EEEIH+ALTAFSNNKSPGPDG
Subjt: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
Query: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
FTMEFFKAAWFVLKDDIFNIFRDFH NCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPS VAENQ+AFVKGRQIIDAI
Subjt: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
Query: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
LVANEAIDYWRVKKIQGF GYPIKWRRWIKACISSVQYSIIINGRPR
Subjt: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
Query: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
EDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQW ITTKFFPINYLGVPLGG
Subjt: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
Query: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGD
K TTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVST K IEKSWRNFFWKN SETHKLHL
Subjt: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGD
Query: IPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELK
VSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQD+SIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELK
Subjt: IPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELK
Query: NSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRN
NSLNASFCENGRDSPTW+LNSDGFYSVAS KC FFIWTLLYDSVNT +QLTKRMPNLCSRPSWCVMCKRN
Subjt: NSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRN
Query: DEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSS
+EDRIHLFILCPIAKSIWNLISSHL SNVNCLSPK LC TMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSR
Subjt: DEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSS
Query: LFTNYQATSIALNLNAFS
LFTNYQATSIALNLNAF+
Subjt: LFTNYQATSIALNLNAFS
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| A0A5D3DLM2 LINE-1 retrotransposable element ORF2 protein | 0.0e+00 | 66.88 | Show/hide |
Query: MWDDLRFNVTDFIEGEYSLSININFPDGPSSSAWWLSAIYGPTGGRNRNSFWAELLDLKNKCSPT---------------------CKYSMRNFNNFISD
MWDDLRF+VTD IEG +SLSININFPDGPSSSAWWLSAIYGP+GGRNR SFWAELLDLKNKCSPT K+SMR FN FISD
Subjt: MWDDLRFNVTDFIEGEYSLSININFPDGPSSSAWWLSAIYGPTGGRNRNSFWAELLDLKNKCSPT---------------------CKYSMRNFNNFISD
Query: SNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRNWWKNLRQEGH
SNLIDPPLSNAKFTWSNLRVQ +LSRIDRFLYT +WENLFTAHYSK + WGP PFKFINVHLKEPWFK NV WWKNLRQ GH
Subjt: SNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRNWWKNLRQEGH
Query: PGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICS
PGFSFMKKLK LS IIRDEQKKN +DEEK+AWIKE+DNIDRLEAEGN SEELSLRRTK+KAD+L+ FKEAQIWYQKSKRLW TEGDENTSFFHKICS
Subjt: PGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICS
Query: ARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAW
ARQRRSIISNINS DGVPC+TNE+IAKAFLDHFE IY GGG E+PWLI+NLSWSPISTTQAQNLCS FTEEEIH ALTAFSNNKSPGPDGFTMEF+K+ W
Subjt: ARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAW
Query: FVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW
VLK++IFNIFRDFH NCIINKAVN+TNIALIAKKEKCAEPADYRPI +AENQ+AFVKGRQIIDAILVANEAIDYW
Subjt: FVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW
Query: RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIK
RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYP +WR+WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE IK
Subjt: RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIK
Query: GVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGGKQTTKAFWKN
GVKM N+NLTHLLFADDILLFVEDDEHS+QNLKNIINLFQLASGL+INLNKSTISPIN+ AART+QIASQW I+TKF PINYLGVPLGGKQTTK+FWKN
Subjt: GVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGGKQTTKAFWKN
Query: IDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGDIPCVCNHSSS
++EKI+KKL SWKYSMLSKG A+ P +P + K W F
Subjt: IDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGDIPCVCNHSSS
Query: RSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCEN
+F + DSSI+DMWN TLMDWDL PRRQ+RDWE+PLWAELKNSLN SFCEN
Subjt: RSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFALSTNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCEN
Query: GRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFIL
G+DSPTW LNSDGFY+VAS KC FFIWTLLYDSVNT EQLTKRMPNLCSRPS
Subjt: GRDSPTWVLNSDGFYSVAS-------------------------------KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFIL
Query: CPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSI
WKQKTKKN+IL+NTYASALWNIWLERNARIFNGKEKTVA++WEDIKALAGLWTSRSSLFTNYQA+SI
Subjt: CPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASALWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSI
Query: ALNLNAFS
ALNLNAFS
Subjt: ALNLNAFS
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| A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein | 0.0e+00 | 80.7 | Show/hide |
Query: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
MR FN FI+DSNLIDPPLSNAKFTWSNLRV +LSRIDRFLYTT+WENLFTAHYSK + WGP PFK INVHLKEPWFKNNV N
Subjt: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQILSRIDRFLYTTDWENLFTAHYSK----------------PSLDWGPLPFKFINVHLKEPWFKNNVRN
Query: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
WWKNLRQEGHPGFSFM+KLK LS IIR+EQ+KN SDE+K AWIKE+D+IDRLEAEGNLSEELSLRRT++KAD+L+ FKEAQIWYQKSKRLW TEGDE
Subjt: WWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDE
Query: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
NTSFFHKICSARQRRSIISNINS DGVPC+TNE+IAKAFLDHFE IY GGG E+PWLI+NL+WSPIST QAQNLCS FTEEEIH ALTAFSNNKSPGPDG
Subjt: NTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDG
Query: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
FTMEF+K+ W VLK++I NIFRDFH NCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLK+TLP VAENQ+AFVKGRQIIDAI
Subjt: FTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAI
Query: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYP KWR WI+ACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDY+SR
Subjt: LVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
Query: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
LLNSVGE IKGVK+ N+NLTHLLFADDILLFVEDDEHS+QNLKNIINLFQLASGL+INLNKSTISPIN+DA+RT+QIASQW I+TKF PINYLGVPLGG
Subjt: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPLGG
Query: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG-----
KQ TK FWKN++EKI+KKLASWKYSMLSKGGKITLIKS+LASLPTYQLSIFKAPVSTCK IEK+WRNF WKNP ETHKLHLV+WAKITS KE+GG
Subjt: KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG-----
Query: ----------------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFAL
SKGDIPCVCNHSSSRSPWFSICKGL WFQRHVSWKIKNGR+FSFWHSHWHQNSPLS HYPRL+AL
Subjt: ----------------------------------QSKGDIPCVCNHSSSRSPWFSICKGLAWFQRHVSWKIKNGRNFSFWHSHWHQNSPLSLHYPRLFAL
Query: STNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------K
STN++SSI+DMWN TLMDWDL PRRQLR+WEHPLWAELKNSLNASFCENG DSP W LNS+G Y+VAS K
Subjt: STNQDSSIKDMWNTTLMDWDLKPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVLNSDGFYSVAS-------------------------------K
Query: CNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASA
C FFIWTLLYDSVNT EQL KR+PNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIW ISSHL+SNVNCLSPK LC TMCSWKQKTKKN+ILFNTYASA
Subjt: CNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKKNIILFNTYASA
Query: LWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
LWNIWLERNARIFNGKEKTVA++WEDIKALAGLWTSRSSLF+NYQA+SIALNLNAFS
Subjt: LWNIWLERNARIFNGKEKTVADLWEDIKALAGLWTSRSSLFTNYQATSIALNLNAFS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 1.5e-38 | 23.23 | Show/hide |
Query: QKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICSARQRRSIISNINSDDGVPC
++K R + + +KE++ ++ ++ + +E+ TKI+A++ + ++ +S+ + ++ ++ ++ ++ I I +D G
Subjt: QKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICSARQRRSIISNINSDDGVPC
Query: TTNENIAKAFLDHFEGIYNGGGVEN----PWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAWFVLKDDIFNIFRDFH
T I ++++ +Y +EN ++ + ++ + ++L T EI + + KSPGPDGFT EF++ L + +F+
Subjt: TTNENIAKAFLDHFEGIYNGGGVEN----PWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAWFVLKDDIFNIFRDFH
Query: MNCIINKAVNITNIALIAKKEK-CAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW-RVKKIQGFVIKLD
I+ + +I LI K + + ++RPISL K++ K++A R+++ + ++ +Q+ F+ G Q I + I + R K +I +D
Subjt: MNCIINKAVNITNIALIAKKEK-CAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW-RVKKIQGFVIKLD
Query: IEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIKGVKM-NDNLNLTH
EKAFDK+ F+ L K G + + I+A +II+NG+ G RQG P+SP +F + ++ ++R + E IKG+++ + + L+
Subjt: IEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIKGVKM-NDNLNLTH
Query: LLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPL--GGKQTTKAFWKNIDEKISKKLA
LFADD+++++E+ S QNL +I+ F SG IN+ KS N + QI + T I YLG+ L K K +K + ++I +
Subjt: LLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFFPINYLGVPL--GGKQTTKAFWKNIDEKISKKLA
Query: SWKYSMLSKGGKITLIKSTLASLPTYQLSI--FKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGDIPCVCNHSSSRSPWFSIC
WK S G+I ++K + Y+ + K P++ +EK+ F W K ++ + ++ + GG + D + +++ W+
Subjt: SWKYSMLSKGGKITLIKSTLASLPTYQLSI--FKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGDIPCVCNHSSSRSPWFSIC
Query: KGLAWFQ
W+Q
Subjt: KGLAWFQ
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| P08548 LINE-1 reverse transcriptase homolog | 1.4e-36 | 23.24 | Show/hide |
Query: FKFINVHLKEPWFKNNV-RNWWKNLRQEGHPGFSFMKKLKHLSVIIRDE-------QKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKA
+K N+ LK+ W + + + K L Q + ++ ++R + KK R+ +K+++ + + + +E+ TKI+A
Subjt: FKFINVHLKEPWFKNNV-RNWWKNLRQEGHPGFSFMKKLKHLSVIIRDE-------QKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKA
Query: DILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYN---GGGVENPWLIENLSWSPISTTQ
++ + K KSK + + ++ + ++ +S+IS+I + + T I K ++++ +Y+ E +E +S +
Subjt: DILLYDFKEAQIWYQKSKRLWNTEGDENTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYN---GGGVENPWLIENLSWSPISTTQ
Query: AQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEK-CAEPADYRPISLTTSIYKLIAK
+ L + EI + + KSPGPDGFT EF++ L + N+F++ I+ NI LI K K +YRPISL K++ K
Subjt: AQNLCSFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEK-CAEPADYRPISLTTSIYKLIAK
Query: VIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW-RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIING
++ R+++ + ++ +Q+ F+ G Q I + I + ++K ++ +D EKAFD + F+ L K G + + I+A S +II+NG
Subjt: VIAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYW-RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIING
Query: RPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIKGVKM-NDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKST--I
G RQG P+SP +F + M+ ++ + + IKG+ + ++ + L+ LFADD+++++E+ S L +I + SG IN +KS I
Subjt: RPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIKGVKM-NDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKST--I
Query: SPINIDAARTDQIASQWRITTKFFPINYLGVPL--GGKQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSI--FKAPVSTCKII
N A +T + + + + K + YLGV L K K ++ + ++I++ + WK S G+I ++K ++ Y + KAP+S K +
Subjt: SPINIDAARTDQIASQWRITTKFFPINYLGVPL--GGKQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSI--FKAPVSTCKII
Query: EKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGDIPCVCNHSSSRSPWF
EK +F W K ++ +++ + GG + D+ ++ W+
Subjt: EKSWRNFFWKNPSETHKLHLVSWAKITSPKERGGQSKGDIPCVCNHSSSRSPWF
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| P0C2F6 Putative ribonuclease H protein At1g65750 | 7.8e-16 | 24.02 | Show/hide |
Query: VPLGGKQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG
+P+ K+ K + I E++S +++ W+ LS G++TL K+ L+S+P + +S P S +++ R F W + +E K HLV W+K+ SPK+ GG
Subjt: VPLGGKQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKERGG
Query: ----------------------QSKG-----------------DIPCVCNHSSSRSPWFSICKGLAWFQRH-VSWKIKNGRNFSFWHSHWHQNSPLSLHY
Q K D + S S W SI GL H V W +G+ FW W PL L
Subjt: ----------------------QSKG-----------------DIPCVCNHSSSRSPWFSICKGLAWFQRH-VSWKIKNGRNFSFWHSHWHQNSPLSLHY
Query: PRLFALSTNQDSSIKDMWNTTLMDWDL---------KPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVL-----------NSDGFYS------VAS
+ KD+W WD R +LR L ++ L+ F ++G+ S N F++ V
Subjt: PRLFALSTNQDSSIKDMWNTTLMDWDL---------KPRRQLRDWEHPLWAELKNSLNASFCENGRDSPTWVL-----------NSDGFYS------VAS
Query: KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIW
+ F+W + +V T E+ +R S + C +CK E +H+ CP IW
Subjt: KCNFFIWTLLYDSVNTTEQLTKRMPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIW
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| P11369 LINE-1 retrotransposable element ORF2 protein | 1.4e-36 | 25.24 | Show/hide |
Query: KICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVEN----PWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFT
++ + + +I+ I ++ G T E I ++ +Y+ +EN ++ ++ Q +L S + +EI + + KSPGPDGF+
Subjt: KICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVEN----PWLIENLSWSPISTTQAQNLCSFFTEEEIHTALTAFSNNKSPGPDGFT
Query: MEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEK-CAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAIL
EF++ L + +F + + + I LI K +K + ++RPISL K++ K++A R++E + +++ +Q+ F+ G Q I
Subjt: MEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEK-CAEPADYRPISLTTSIYKLIAKVIAERLKETLPSMVAENQLAFVKGRQIIDAIL
Query: VANEAIDYW-RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
+ I Y ++K +I LD EKAFDK+ F+ +L + G + IKA S +I +NG I G RQG P+SP++F + ++ ++R
Subjt: VANEAIDYW-RVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISR
Query: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFF----PINYLGV
+ E IKG+++ + L ADD+++++ D ++S + L N+IN F G IN NKS + + Q + R TT F I YLGV
Subjt: LLNSVGENIKGVKMNDNLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAARTDQIASQWRITTKFF----PINYLGV
Query: PLGG--KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSI--FKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKE
L K +K++ ++I + L WK S G+I ++K + Y+ + K P +E + F W N K ++ + + +
Subjt: PLGG--KQTTKAFWKNIDEKISKKLASWKYSMLSKGGKITLIKSTLASLPTYQLSI--FKAPVSTCKIIEKSWRNFFWKNPSETHKLHLVSWAKITSPKE
Query: RGGQSKGDIPCVCNHSSSRSPWF
GG + D+ ++ W+
Subjt: RGGQSKGDIPCVCNHSSSRSPWF
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 9.8e-35 | 23.64 | Show/hide |
Query: FINVHLKEPWFKNNVRNWWKNLRQEGHPGFSFMKK-----LKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLY
F N L++ F +VR+ W+ R F+ + + HL ++ ++ K + Q + E A EV ++++ G+ + L + K +
Subjt: FINVHLKEPWFKNNVRNWWKNLRQEGHPGFSFMKK-----LKHLSVIIRDEQKKNNRQSDEEKRAWIKEVDNIDRLEAEGNLSEELSLRRTKIKADILLY
Query: DFKEAQIWYQKSKRLWNTEGDENTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWS---PISTTQAQNLC
+ ++A+ + +S+ + D + FF+ + + R I+ + ++DG P E I ++ +++ + +P E L W +S + + L
Subjt: DFKEAQIWYQKSKRLWNTEGDENTSFFHKICSARQRRSIISNINSDDGVPCTTNENIAKAFLDHFEGIYNGGGVENPWLIENLSWS---PISTTQAQNLC
Query: SFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERL
+ T +E+ AL +NKSPG DG T+EFF+ W L D + + + + ++L+ KK ++RP+SL ++ YK++AK I+ RL
Subjt: SFFTEEEIHTALTAFSNNKSPGPDGFTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLIAKVIAERL
Query: KETLPSMVAENQLAFVKGRQIIDAILVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQ
K L ++ +Q V GR I D + + + + + R + + LD EKAFD+++ +++ L + ++ ++K +S + + IN +
Subjt: KETLPSMVAENQLAFVKGRQIIDAILVANEAIDYWRVKKIQGFVIKLDIEKAFDKLNWRFIDFMLMKKGYPIKWRRWIKACISSVQYSIIINGRPRGKIQ
Query: PSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIKGVKMND-NLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAAR
RG+RQG P+S ++ LA++ LL + + G+ + + ++ + +ADD++L V D L+ + ++ AS IN +KS S + + +
Subjt: PSRGIRQGDPISPFIFVLAMDYISRLLNSVGENIKGVKMND-NLNLTHLLFADDILLFVEDDEHSLQNLKNIINLFQLASGLNINLNKSTISPINIDAAR
Query: TDQIASQWR-ITTKFFPINYLGVPLGGKQ-TTKAFWKNIDEKISKKLASWK--YSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFW
D + +R I+ + I YLGV L ++ + ++E + +L WK +LS G+ +I +AS Y+L I++ +F W
Subjt: TDQIASQWR-ITTKFFPINYLGVPLGGKQ-TTKAFWKNIDEKISKKLASWK--YSMLSKGGKITLIKSTLASLPTYQLSIFKAPVSTCKIIEKSWRNFFW
Query: KNPSETHKLHLVSWAKITSPKERGGQ
H VS + P + GGQ
Subjt: KNPSETHKLHLVSWAKITSPKERGGQ
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G43760.1 DNAse I-like superfamily protein | 2.2e-26 | 28.53 | Show/hide |
Query: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQ-ILSRIDRFLYTTDWENLFTAHYSKPSL----DWGP-------LP---------FKFINVHLKEPWFK
+ F N + DS+L+D P +TWSN + I+ ++DR + DW + F + + L D P LP F F++ H P F
Subjt: MRNFNNFISDSNLIDPPLSNAKFTWSNLRVQQ-ILSRIDRFLYTTDWENLFTAHYSKPSL----DWGP-------LP---------FKFINVHLKEPWFK
Query: NNVRNWWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKE-VDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEA--QIWYQKSKR
++ W+ G FS + LK K NRQ + KE +D+++ ++++ + SL R + A F A + QKS+
Subjt: NNVRNWWKNLRQEGHPGFSFMKKLKHLSVIIRDEQKKNNRQSDEEKRAWIKE-VDNIDRLEAEGNLSEELSLRRTKIKADILLYDFKEA--QIWYQKSKR
Query: LWNTEGDENTSFFHKICSARQRRSIISNINSDDGV---PCTTNENIAKAFLDHFEG----IYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHT
W +GD NT FFHK+ A Q +++I + DD V T + + A+ H G I V+ I+++ + T A L + +++EI
Subjt: LWNTEGDENTSFFHKICSARQRRSIISNINSDDGV---PCTTNENIAKAFLDHFEG----IYNGGGVENPWLIENLSWSPISTTQAQNLCSFFTEEEIHT
Query: ALTAFSNNKSPGPDGFTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLI
A+ A NK+PGPD FT EFF +WFV+KD ++F + K N T I LI K + + +RP+S T +YK+I
Subjt: ALTAFSNNKSPGPDGFTMEFFKAAWFVLKDDIFNIFRDFHMNCIINKAVNITNIALIAKKEKCAEPADYRPISLTTSIYKLI
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| AT1G45063.1 copper ion binding;electron carriers | 3.1e-07 | 27.05 | Show/hide |
Query: TLLYDSVNTTEQLTKRMPNLCSR--------PSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWK----QKTKKNIILF
TL ++ E+LT+ ++C R PS C++C DE R H+F CP + +W+ S+ ++P + W + K IL
Subjt: TLLYDSVNTTEQLTKRMPNLCSR--------PSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWK----QKTKKNIILF
Query: NTYASALWNIWLERNARIFNGK
Y +++++IW ERN R+ + K
Subjt: NTYASALWNIWLERNARIFNGK
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| AT4G05095.1 BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT4G04650.1) | 1.1e-04 | 24.3 | Show/hide |
Query: SRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKK----NIILFNTYASALWNIWLERNARIFNGKEKTVADL
S PS CV+C N E R HLF C ++ ++W + L+P +L +W + ++I+ + ++++ +W ERN R+ + ++ +
Subjt: SRPSWCVMCKRNDEDRIHLFILCPIAKSIWNLISSHLNSNVNCLSPKVLCTTMCSWKQKTKK----NIILFNTYASALWNIWLERNARIFNGKEKTVADL
Query: WEDIKAL
++IK +
Subjt: WEDIKAL
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| AT4G20520.1 RNA binding;RNA-directed DNA polymerases | 4.7e-08 | 34.57 | Show/hide |
Query: IAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYWRVKK-IQGF-VIKLDIEKAFDKLNWRFIDFMLMKKGYPIKW
+ ERLK + +++ Q +F+ GR D I+ EA+ R KK ++G+ ++KLD+EKA+D++ W +++ L+ G+P W
Subjt: IAERLKETLPSMVAENQLAFVKGRQIIDAILVANEAIDYWRVKK-IQGF-VIKLDIEKAFDKLNWRFIDFMLMKKGYPIKW
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| ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) | 7.8e-11 | 46.27 | Show/hide |
Query: IINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE--NIKGVKMNDNL-NLTHLLFADD
IING P+G + PSRG+RQGDP+SP++F+L + +S L E + G+++++N + HLLFADD
Subjt: IINGRPRGKIQPSRGIRQGDPISPFIFVLAMDYISRLLNSVGE--NIKGVKMNDNL-NLTHLLFADD
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