; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0004709 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004709
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Genome locationchr06:30623339..30623515
RNA-Seq ExpressionPay0004709
SyntenyPay0004709
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050334.1 uncharacterized protein E6C27_scaffold88G00600 [Cucumis melo var. makuwa]6.7e-2394.83Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IGEALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
KAA0053465.1 uncharacterized protein E6C27_scaffold190G00130 [Cucumis melo var. makuwa]6.7e-2394.83Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IGEALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
KAA0060610.1 uncharacterized protein E6C27_scaffold22G004880 [Cucumis melo var. makuwa]6.7e-2394.83Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IGEALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
KAA0066957.1 uncharacterized protein E6C27_scaffold550G00970 [Cucumis melo var. makuwa]6.7e-2393.1Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN+AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IG+ALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
TYK02262.1 uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]6.7e-2394.83Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IGEALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
TrEMBL top hitse value%identityAlignment
A0A5A7SLL7 Ribonuclease H3.2e-2394.83Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IGEALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
A0A5A7UID6 Ribonuclease H3.2e-2394.83Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IGEALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
A0A5A7V3K3 Ribonuclease H3.2e-2394.83Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IGEALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
A0A5D3BTY1 Ribonuclease H3.2e-2394.83Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IGEALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
A0A5D3E2D0 Integrase catalytic domain-containing protein3.2e-2393.1Show/hide
Query:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
        MDKLCE FNFKQYKSSMYN+AANGLAEAFNKTLCSLLKKVVSKTKRDWQE+IG+ALWA
Subjt:  MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGCTATGTGAAAATTTTAACTTCAAACAATACAAGTCTTCTATGTACAATATCGCAGCAAATGGATTGGCAGAAGCATTCAACAAAACTTTATGCAGTCTACT
GAAAAAGGTGGTCTCCAAGACAAAAAGAGATTGGCAAGAAGAGATTGGGGAAGCATTGTGGGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGCTATGTGAAAATTTTAACTTCAAACAATACAAGTCTTCTATGTACAATATCGCAGCAAATGGATTGGCAGAAGCATTCAACAAAACTTTATGCAGTCTACT
GAAAAAGGTGGTCTCCAAGACAAAAAGAGATTGGCAAGAAGAGATTGGGGAAGCATTGTGGGCCTAA
Protein sequenceShow/hide protein sequence
MDKLCENFNFKQYKSSMYNIAANGLAEAFNKTLCSLLKKVVSKTKRDWQEEIGEALWA