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Pay0004745 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004745
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr02:11251835..11252359
RNA-Seq ExpressionPay0004745
SyntenyPay0004745
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]1.1e-6578.24Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MN SIVQLLA EK +GDNY  W SNLN ILV++DLRF LTEE PQAP  NAN+ VREAY RWVKAN+KA VYILASM+DVLA+KH S+AT K IMDSLRE
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ
        MFGQ  WS R+EAIK+IYTK+MKEGTSVREHV+DMM HFNIAEV   PIDEANQVSFILQSL KSFVPFQ
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ

KAA0035676.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-6475.88Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MN+SIVQLLA +K +GDNY TW SNLN ILV++DLRF LTEE PQ PTSNAN+  REAY RW+KANEKA VYILASMSDVLA+KH  LATTKEI+DSL+ 
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ
        MFGQ  WS R+EAIKYIYTK+MK+GTSVREHV+DMM HFNI EV    IDEANQVSFIL+SL KSF+PFQ
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ

KAA0047753.1 gag/pol protein [Cucumis melo var. makuwa]9.5e-6575.88Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MN+SI+QLLA EK +GDNYVTW SNLN ILV++DLRF LTE+ PQ PTSN N+  R+AY RW+KANEKACVYILASMS VLA+KH SLATTKE+MDSL+ 
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ
        MFGQ  WS R+EAIKYIYTK+MKEGTSVRE V+DMM HFNIAEV    IDEANQVSFIL+SL KSF+PFQ
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ

XP_008444027.1 PREDICTED: uncharacterized protein LOC103487476 [Cucumis melo]2.2e-93100Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQRTRL
        MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQRTRL
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQRTRL

XP_038891685.1 uncharacterized protein LOC120081079 [Benincasa hispida]6.6e-6676.47Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MN+ I+QLLA EK +GDNY  W SNLN IL+++DLRF L+EE PQAP SNAN+ VREAY RWVKANEKACVYILASMSDVLA+KH SLAT KEI+DSLRE
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ
        MFGQ  WS R+EAIK+IYTK+MKEGTSVREHV+DMM +FNIA+V   PIDEANQVSFILQSL KSF+PF+
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ

TrEMBL top hitse value%identityAlignment
A0A1S3BA86 uncharacterized protein LOC1034874761.0e-93100Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQRTRL
        MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQRTRL
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQRTRL

A0A5A7T0E9 Gag/pol protein1.0e-6475.88Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MN+SIVQLLA +K +GDNY TW SNLN ILV++DLRF LTEE PQ PTSNAN+  REAY RW+KANEKA VYILASMSDVLA+KH  LATTKEI+DSL+ 
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ
        MFGQ  WS R+EAIKYIYTK+MK+GTSVREHV+DMM HFNI EV    IDEANQVSFIL+SL KSF+PFQ
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ

A0A5D3BF11 Gag/pol protein8.7e-6474.12Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MN+SIVQLLAFEK +GDNY  W SNLN ILV++DLRF LTEE PQ P+SNA+Q  R+AY RW+KANEKACVYILASMSDVLA+KH SLAT KEIMDSL+ 
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ
        MFGQ  WS R+E IKYIY K+MKEGTS++EHV+DMM HFNI EV    IDEANQVSFIL+SL KSF+ FQ
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ

A0A5D3BSI8 Gag/pol protein4.6e-6575.88Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MN+SI+QLLA EK +GDNYVTW SNLN ILV++DLRF LTE+ PQ PTSN N+  R+AY RW+KANEKACVYILASMS VLA+KH SLATTKE+MDSL+ 
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ
        MFGQ  WS R+EAIKYIYTK+MKEGTSVRE V+DMM HFNIAEV    IDEANQVSFIL+SL KSF+PFQ
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ

E2GK51 Gag/pol protein (Fragment)5.4e-6678.24Show/hide
Query:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE
        MN SIVQLLA EK +GDNY  W SNLN ILV++DLRF LTEE PQAP  NAN+ VREAY RWVKAN+KA VYILASM+DVLA+KH S+AT K IMDSLRE
Subjt:  MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLRE

Query:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ
        MFGQ  WS R+EAIK+IYTK+MKEGTSVREHV+DMM HFNIAEV   PIDEANQVSFILQSL KSFVPFQ
Subjt:  MFGQSLWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAACTCAATAGTACAACTCTTAGCTTTTGAAAAATGTGACGGCGACAATTATGTGACTTGGAACTCAAACCTAAATATCATATTAGTCATAAATGATTTA
AGGTTTTTCTTAACTGAGGAACGTCCTCAAGCCCCAACCTCAAATGCTAATCAAAATGTTCGGGAAGCATATTATCGTTGGGTTAAGGCCAATGAAAAGGCATGT
GTCTATATTCTTGCTAGCATGTCTGATGTTTTGGCAAGGAAACATGGATCCTTAGCCACGACTAAAGAGATTATGGATTCATTGAGGGAGATGTTTGGTCAATCT
TTATGGTCCTTCAGAAACGAAGCAATTAAGTACATTTACACCAAGCAAATGAAGGAAGGGACCTCTGTTAGAGAACATGTCATAGACATGATGAAGCACTTCAAT
ATCGCTGAAGTAATTGTCGATCCCATCGATGAGGCAAATCAGGTGAGTTTTATTTTACAATCTCTTTGGAAGAGTTTTGTACCGTTTCAGAGAACGCGCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAACTCAATAGTACAACTCTTAGCTTTTGAAAAATGTGACGGCGACAATTATGTGACTTGGAACTCAAACCTAAATATCATATTAGTCATAAATGATTTA
AGGTTTTTCTTAACTGAGGAACGTCCTCAAGCCCCAACCTCAAATGCTAATCAAAATGTTCGGGAAGCATATTATCGTTGGGTTAAGGCCAATGAAAAGGCATGT
GTCTATATTCTTGCTAGCATGTCTGATGTTTTGGCAAGGAAACATGGATCCTTAGCCACGACTAAAGAGATTATGGATTCATTGAGGGAGATGTTTGGTCAATCT
TTATGGTCCTTCAGAAACGAAGCAATTAAGTACATTTACACCAAGCAAATGAAGGAAGGGACCTCTGTTAGAGAACATGTCATAGACATGATGAAGCACTTCAAT
ATCGCTGAAGTAATTGTCGATCCCATCGATGAGGCAAATCAGGTGAGTTTTATTTTACAATCTCTTTGGAAGAGTTTTGTACCGTTTCAGAGAACGCGCCTCTGA
Protein sequenceShow/hide protein sequence
MNNSIVQLLAFEKCDGDNYVTWNSNLNIILVINDLRFFLTEERPQAPTSNANQNVREAYYRWVKANEKACVYILASMSDVLARKHGSLATTKEIMDSLREMFGQS
LWSFRNEAIKYIYTKQMKEGTSVREHVIDMMKHFNIAEVIVDPIDEANQVSFILQSLWKSFVPFQRTRL