; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0004786 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004786
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr10:21783025..21784595
RNA-Seq ExpressionPay0004786
SyntenyPay0004786
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037203.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-9667.55Show/hide
Query:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQD------------------DIIVTKPDYLYISVLKNQLALEFKISDLGPL
        MQT+AKSGI KPKAFHIT ALPT T YTEA KYPEWR AMH+EFNALQAQ                   DIIVT+PDY YIS+LKNQLALEFKIS+LG L
Subjt:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQD------------------DIIVTKPDYLYISVLKNQLALEFKISDLGPL

Query:  KYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLV--------------------GSLQYLTFTRSDITF
        KYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTS KSCITPMSTSLDL TIA   NDPSLYRRL                     GS    TF  SD T 
Subjt:  KYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLV--------------------GSLQYLTFTRSDITF

Query:  S------------------VNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVW
                           ++ SSKKQST+SRSS EAEYRSLATT  DLYWI QL+CDLHV LKTSPTLWCDNVSAISLAHNPVFHA TKHIEI+YHFV 
Subjt:  S------------------VNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVW

Query:  EK
        EK
Subjt:  EK

KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.1e-9750Show/hide
Query:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------
        MQTRAKS IFKPKAFHITTALPT TSYTEASKYPEWRTAMHEEFNALQAQ                                                  
Subjt:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------

Query:  --------------------------------------------------------------------------------------------DDIIVTKP
                                                                                                    DDIIVT  
Subjt:  --------------------------------------------------------------------------------------------DDIIVTKP

Query:  DYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRS
        DYLYI VLKNQLALEFKIS+LGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAP FNDP LYRRLVGSLQYLTFTR 
Subjt:  DYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRS

Query:  DITFSVNR------------------------------------------------------------------------SSKKQSTVSRSSTEAEYRSL
        DI  SVNR                                                                        SSKKQS VSRSSTEAEY SL
Subjt:  DITFSVNR------------------------------------------------------------------------SSKKQSTVSRSSTEAEYRSL

Query:  ATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAK
        ATT ADLYWI QL+CDLHVPLKTSPTLWCDNVSAISLAHNPVFHA TKHIEIDYHFVWEKVL K
Subjt:  ATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAK

KAA0047586.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.4e-9776.6Show/hide
Query:  ALQAQ--DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLY
        AL AQ  DDIIVT P Y YIS+LKNQLALEFKISDL PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTS KSCITPMSTSLDLYTIAP FNDPSLY
Subjt:  ALQAQ--DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLY

Query:  RRLVGSLQYLTFTRSDITFSVNR-----------------------SSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSA
         RLVGSLQYLTFTR DI FSVNR                       SSKKQSTVS SSTE EYRSLATT +DLYWI QL+CDLHVPLKTSPTLWCDNVSA
Subjt:  RRLVGSLQYLTFTRSDITFSVNR-----------------------SSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSA

Query:  ISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLL--IFSQSHSYLLHSFTFEINY
        ISL HNP+FHA TKHIEIDYHFV +KVL K   SI  + + N L  IFS SHSYLLHSFTFE NY
Subjt:  ISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLL--IFSQSHSYLLHSFTFEINY

XP_016901398.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]7.8e-12579.55Show/hide
Query:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVN
        MQTRAKSGIFKP AFHITTALPT TSYTEASKYPEWRT MHEEFN LQAQDDIIVT P Y YIS+LKNQLALEFKISDL PLKYFLGLEIQSSIDGIFVN
Subjt:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVN

Query:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRSDITFSVNR-----------------------SSKKQSTVSRS
        QAKYLNDLLHTSGMTS KSCITPMSTSLDLYTIAP FNDPSLY RLVGSLQYLTFTR DI FSVNR                       SSKKQSTVS S
Subjt:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRSDITFSVNR-----------------------SSKKQSTVSRS

Query:  STEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLL--IFSQSHSYLLH
        STE EYRSLATT +DLYWI QL+CDLHVPLKTSPTLWCDNVSAISL HNP+FHA TKHIEIDYHFV +KVL K   SI  + + N L  IFS SHSYLLH
Subjt:  STEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLL--IFSQSHSYLLH

Query:  SFTFEINY
        SFTFE NY
Subjt:  SFTFEINY

XP_016901898.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.4e-10272.54Show/hide
Query:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVN
        MQT+AKSGI KPKAFHIT ALPT T YTEA KYPEWR AMH+EFNALQAQDDIIVT+PDY YIS+LKNQLALEFKIS+LG LKYFLGLEIQSSIDGIFVN
Subjt:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVN

Query:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLV--------------------GSLQYLTFTRSDITFS-----------------
        QAKYLNDLLHTSGMTS KSCITPMSTSLDL TIA   NDPSLYRRL                     GS    TF  SD T                   
Subjt:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLV--------------------GSLQYLTFTRSDITFS-----------------

Query:  -VNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEK
         ++ SSKKQST+SRSS EAEYRSLATT  DLYWI QL+CDLHV LKTSPTLWCDNVSAISLAHNPVFHA TKHIEI+YHFVWEK
Subjt:  -VNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEK

TrEMBL top hitse value%identityAlignment
A0A1S4DZJ0 uncharacterized mitochondrial protein AtMg00810-like3.8e-12579.55Show/hide
Query:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVN
        MQTRAKSGIFKP AFHITTALPT TSYTEASKYPEWRT MHEEFN LQAQDDIIVT P Y YIS+LKNQLALEFKISDL PLKYFLGLEIQSSIDGIFVN
Subjt:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVN

Query:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRSDITFSVNR-----------------------SSKKQSTVSRS
        QAKYLNDLLHTSGMTS KSCITPMSTSLDLYTIAP FNDPSLY RLVGSLQYLTFTR DI FSVNR                       SSKKQSTVS S
Subjt:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRSDITFSVNR-----------------------SSKKQSTVSRS

Query:  STEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLL--IFSQSHSYLLH
        STE EYRSLATT +DLYWI QL+CDLHVPLKTSPTLWCDNVSAISL HNP+FHA TKHIEIDYHFV +KVL K   SI  + + N L  IFS SHSYLLH
Subjt:  STEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLL--IFSQSHSYLLH

Query:  SFTFEINY
        SFTFE NY
Subjt:  SFTFEINY

A0A1S4E100 uncharacterized mitochondrial protein AtMg00810-like1.2e-10272.54Show/hide
Query:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVN
        MQT+AKSGI KPKAFHIT ALPT T YTEA KYPEWR AMH+EFNALQAQDDIIVT+PDY YIS+LKNQLALEFKIS+LG LKYFLGLEIQSSIDGIFVN
Subjt:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVN

Query:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLV--------------------GSLQYLTFTRSDITFS-----------------
        QAKYLNDLLHTSGMTS KSCITPMSTSLDL TIA   NDPSLYRRL                     GS    TF  SD T                   
Subjt:  QAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLV--------------------GSLQYLTFTRSDITFS-----------------

Query:  -VNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEK
         ++ SSKKQST+SRSS EAEYRSLATT  DLYWI QL+CDLHV LKTSPTLWCDNVSAISLAHNPVFHA TKHIEI+YHFVWEK
Subjt:  -VNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEK

A0A5A7T2K7 Putative mitochondrial protein7.4e-9767.55Show/hide
Query:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQD------------------DIIVTKPDYLYISVLKNQLALEFKISDLGPL
        MQT+AKSGI KPKAFHIT ALPT T YTEA KYPEWR AMH+EFNALQAQ                   DIIVT+PDY YIS+LKNQLALEFKIS+LG L
Subjt:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQD------------------DIIVTKPDYLYISVLKNQLALEFKISDLGPL

Query:  KYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLV--------------------GSLQYLTFTRSDITF
        KYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTS KSCITPMSTSLDL TIA   NDPSLYRRL                     GS    TF  SD T 
Subjt:  KYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLV--------------------GSLQYLTFTRSDITF

Query:  S------------------VNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVW
                           ++ SSKKQST+SRSS EAEYRSLATT  DLYWI QL+CDLHV LKTSPTLWCDNVSAISLAHNPVFHA TKHIEI+YHFV 
Subjt:  S------------------VNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVW

Query:  EK
        EK
Subjt:  EK

A0A5A7TPR4 Putative mitochondrial protein1.5e-9750Show/hide
Query:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------
        MQTRAKS IFKPKAFHITTALPT TSYTEASKYPEWRTAMHEEFNALQAQ                                                  
Subjt:  MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQ--------------------------------------------------

Query:  --------------------------------------------------------------------------------------------DDIIVTKP
                                                                                                    DDIIVT  
Subjt:  --------------------------------------------------------------------------------------------DDIIVTKP

Query:  DYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRS
        DYLYI VLKNQLALEFKIS+LGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAP FNDP LYRRLVGSLQYLTFTR 
Subjt:  DYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRS

Query:  DITFSVNR------------------------------------------------------------------------SSKKQSTVSRSSTEAEYRSL
        DI  SVNR                                                                        SSKKQS VSRSSTEAEY SL
Subjt:  DITFSVNR------------------------------------------------------------------------SSKKQSTVSRSSTEAEYRSL

Query:  ATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAK
        ATT ADLYWI QL+CDLHVPLKTSPTLWCDNVSAISLAHNPVFHA TKHIEIDYHFVWEKVL K
Subjt:  ATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAK

A0A5D3CD24 Putative mitochondrial protein1.1e-9776.6Show/hide
Query:  ALQAQ--DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLY
        AL AQ  DDIIVT P Y YIS+LKNQLALEFKISDL PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTS KSCITPMSTSLDLYTIAP FNDPSLY
Subjt:  ALQAQ--DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLY

Query:  RRLVGSLQYLTFTRSDITFSVNR-----------------------SSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSA
         RLVGSLQYLTFTR DI FSVNR                       SSKKQSTVS SSTE EYRSLATT +DLYWI QL+CDLHVPLKTSPTLWCDNVSA
Subjt:  RRLVGSLQYLTFTRSDITFSVNR-----------------------SSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSA

Query:  ISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLL--IFSQSHSYLLHSFTFEINY
        ISL HNP+FHA TKHIEIDYHFV +KVL K   SI  + + N L  IFS SHSYLLHSFTFE NY
Subjt:  ISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLL--IFSQSHSYLLHSFTFEINY

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.6e-1622.52Show/hide
Query:  MHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFND
        ++E    L   DD+++   D   ++  K  L  +F+++DL  +K+F+G+ I+   D I+++Q+ Y+  +L    M +  +  TP+ + ++   +    + 
Subjt:  MHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFND

Query:  PSLYRRLVGSLQYLTF-TRSDITFSVN-------------------------------------------------------------------------
         +  R L+G L Y+   TR D+T +VN                                                                         
Subjt:  PSLYRRLVGSLQYLTF-TRSDITFSVN-------------------------------------------------------------------------

Query:  ---RSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTN
            ++K+Q++V+ SSTEAEY +L   + +  W+  L+  +++ L+    ++ DN   IS+A+NP  H   KHI+I YHF  E+V       +  +PT N
Subjt:  ---RSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTN

Query:  LL
         L
Subjt:  LL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-0832.14Show/hide
Query:  LLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRSDITFSVNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPL
        L +  G T    C       L  YT A +  D    +   G L   TF+   I++     SK Q  V+ S+TEAEY +   T  ++ W+ + + +L +  
Subjt:  LLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRSDITFSVNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPL

Query:  KTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKV
        K    ++CD+ SAI L+ N ++HA TKHI++ YH++ E V
Subjt:  KTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKV

P92519 Uncharacterized mitochondrial protein AtMg008102.7e-1930.28Show/hide
Query:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSL
        DDI++T      +++L  QL+  F + DLGP+ YFLG++I++   G+F++Q KY   +L+ +GM   K   TP+   L+       + DPS +R +VG+L
Subjt:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSL

Query:  QYLTFTRSDITFSVN-------------------------------------------------------------------------RSSKKQSTVSRS
        QYLT TR DI+++VN                                                                          S+K+Q TVSRS
Subjt:  QYLTFTRSDITFSVN-------------------------------------------------------------------------RSSKKQSTVSRS

Query:  STEAEYRSLATTIADLYW
        STE EYR+LA T A+L W
Subjt:  STEAEYRSLATTIADLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.0e-3234.56Show/hide
Query:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPLFNDPSLYRRLVG
        DDI++T  D   +    + L+  F + D   L YFLG+E +    G+ ++Q +Y+ DLL  + M +AK   TPM+ S  L LY+   L  DP+ YR +VG
Subjt:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPLFNDPSLYRRLVG

Query:  SLQYLTFTRSDITFSVNR-------------------------------------------------------------------------SSKKQSTVS
        SLQYL FTR DI+++VNR                                                                         SSKKQ  V 
Subjt:  SLQYLTFTRSDITFSVNR-------------------------------------------------------------------------SSKKQSTVS

Query:  RSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKV
        RSSTEAEYRS+A T +++ WI  L+ +L + L   P ++CDNV A  L  NPVFH+  KHI IDYHF+  +V
Subjt:  RSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.0e-3133.82Show/hide
Query:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPLFNDPSLYRRLVG
        DDI++T  D + +    + L+  F + +   L YFLG+E +    G+ ++Q +Y  DLL  + M +AK   TPM+TS  L L++   L  DP+ YR +VG
Subjt:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTS--LDLYTIAPLFNDPSLYRRLVG

Query:  SLQYLTFTRSDITFSVNR-------------------------------------------------------------------------SSKKQSTVS
        SLQYL FTR D++++VNR                                                                         SSKKQ  V 
Subjt:  SLQYLTFTRSDITFSVNR-------------------------------------------------------------------------SSKKQSTVS

Query:  RSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKV
        RSSTEAEYRS+A T ++L WI  L+ +L + L   P ++CDNV A  L  NPVFH+  KHI +DYHF+  +V
Subjt:  RSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.1e-3134.44Show/hide
Query:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYT-IAPLFNDPSLYRRLVGS
        DDII+   +   +  LK+QL   FK+ DLGPLKYFLGLEI  S  GI + Q KY  DLL  +G+   K    PM  S+         F D   YRRL+G 
Subjt:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYT-IAPLFNDPSLYRRLVGS

Query:  LQYLTFTRSDITFSVNR-------------------------------------------------------------------------SSKKQSTVSR
        L YL  TR DI+F+VN+                                                                          SKKQ  VS+
Subjt:  LQYLTFTRSDITFSVNR-------------------------------------------------------------------------SSKKQSTVSR

Query:  SSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEK
        SS EAEYR+L+    ++ W+ Q   +L +PL     L+CDN +AI +A N VFH  TKHIE D H V E+
Subjt:  SSTEAEYRSLATTIADLYWIGQLICDLHVPLKTSPTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEK

ATMG00810.1 DNA/RNA polymerases superfamily protein1.9e-2030.28Show/hide
Query:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSL
        DDI++T      +++L  QL+  F + DLGP+ YFLG++I++   G+F++Q KY   +L+ +GM   K   TP+   L+       + DPS +R +VG+L
Subjt:  DDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSL

Query:  QYLTFTRSDITFSVN-------------------------------------------------------------------------RSSKKQSTVSRS
        QYLT TR DI+++VN                                                                          S+K+Q TVSRS
Subjt:  QYLTFTRSDITFSVN-------------------------------------------------------------------------RSSKKQSTVSRS

Query:  STEAEYRSLATTIADLYW
        STE EYR+LA T A+L W
Subjt:  STEAEYRSLATTIADLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTCGAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTTCCAACTACCACATCATATACAGAAGCCTCCAAATATCCAGAA
TGGCGAACTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGATGACATCATTGTCACTAAACCTGACTATTTATACATTTCTGTTCTTAAAAACCAATTG
GCCCTGGAATTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCGTCTATTGATGGCATATTTGTTAACCAAGCTAAATATCTC
AATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACTATTTAATGATCCA
TCACTTTATCGCAGACTAGTTGGTTCCTTACAATATCTTACCTTCACTCGTTCTGATATTACATTCTCTGTAAATCGTTCTTCTAAAAAGCAATCTACCGTCTCT
CGTTCCTCCACAGAAGCAGAATATCGTTCCCTTGCCACTACTATTGCCGATCTTTACTGGATCGGACAGCTTATATGTGATCTCCATGTTCCCCTTAAGACATCA
CCAACATTATGGTGTGACAATGTTTCTGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTTGCACCAAACACATTGAAATCGATTATCACTTTGTTTGGGAA
AAAGTTCTCGCAAAGACATCTCCATCCATTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCGAG
ATAAACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACTCGAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTTCCAACTACCACATCATATACAGAAGCCTCCAAATATCCAGAA
TGGCGAACTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGATGACATCATTGTCACTAAACCTGACTATTTATACATTTCTGTTCTTAAAAACCAATTG
GCCCTGGAATTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCGTCTATTGATGGCATATTTGTTAACCAAGCTAAATATCTC
AATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACTATTTAATGATCCA
TCACTTTATCGCAGACTAGTTGGTTCCTTACAATATCTTACCTTCACTCGTTCTGATATTACATTCTCTGTAAATCGTTCTTCTAAAAAGCAATCTACCGTCTCT
CGTTCCTCCACAGAAGCAGAATATCGTTCCCTTGCCACTACTATTGCCGATCTTTACTGGATCGGACAGCTTATATGTGATCTCCATGTTCCCCTTAAGACATCA
CCAACATTATGGTGTGACAATGTTTCTGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTTGCACCAAACACATTGAAATCGATTATCACTTTGTTTGGGAA
AAAGTTCTCGCAAAGACATCTCCATCCATTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCGAG
ATAAACTACTGA
Protein sequenceShow/hide protein sequence
MQTRAKSGIFKPKAFHITTALPTTTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTKPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYL
NDLLHTSGMTSAKSCITPMSTSLDLYTIAPLFNDPSLYRRLVGSLQYLTFTRSDITFSVNRSSKKQSTVSRSSTEAEYRSLATTIADLYWIGQLICDLHVPLKTS
PTLWCDNVSAISLAHNPVFHACTKHIEIDYHFVWEKVLAKTSPSITSLPTTNLLIFSQSHSYLLHSFTFEINY