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Pay0004814 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004814
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:19699530..19700783
RNA-Seq ExpressionPay0004814
SyntenyPay0004814
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036942.1 uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]4.4e-20386.57Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINNLGEQVSKILELLSMGKGK VVD  QSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYVPTNPLY  PPI          AKI+DM QNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NTPAKQKLDVLEERLR IE TDVYGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMA +INNDKLLVHCFQDSLT PA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA +RLDLQ++EKK SESFKEYAQRWRDM AEVQPPLTDKE+TSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFG+RKYEQNF SYI+NVSHIPYNSYVPA TVSETPKPVNSNSPRP VQGQGSKTNS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFDPIPMTYTELLP
Subjt:  DTWRFDPIPMTYTELLP

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]5.4e-20186.09Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINNLGEQVSKILELLSMGKGK VVD  QSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYVPTNPLY  PPI          AKI+DM QNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NTPAKQKLDVLEERLR IE TDVYGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMY RKMA +INNDKLLVHCFQDSLT PA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA + LDLQ+MEKK SESFKEYAQRWRDMAAEVQPPLTDKE+TSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAEATTEYG IKKGTISKKKEGEVHAIGFPNSGKHKSIFG+RKYEQNF SYI+NVSHIPYNSYVPA TVSETPKPVNSNSPRP VQGQGSKTNS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFDPIPMTYTE+LP
Subjt:  DTWRFDPIPMTYTELLP

KAA0044913.1 uncharacterized protein E6C27_scaffold74G002080 [Cucumis melo var. makuwa]3.1e-20186.09Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINNLGEQVSKILELLSMGKGK  VD  QSSNPIQDTDD IYPPGFTPYHMNVPQSQTTQHYVPTNPLY  PPI          AKI+DMGQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NTPAKQKLDVLEERLR IEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAA+INNDKLLVHCFQDSLTGPA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA NRLDLQ+MEKK SESFKEYAQRWRDM  EVQPPL DKE+TSMFMNTLRAPFYERMIGNASTNFS+IIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAEA TEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFG+RKYEQNF SYI+NVSHIPYNSYVPA TVSE PK  NSNSPRP VQGQGSKTNS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFD IPMTYTELLP
Subjt:  DTWRFDPIPMTYTELLP

KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]6.3e-20285.61Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINN+GEQVSKILELLSMGKGK  VD TQSSNPIQDTDDPIYPP FTPYHMNVPQSQTTQHY+PT+PLY  PPI          AKI+DMGQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NT AKQKLDVLEERLR IEGTDVYGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMA +INNDKLLVHCFQDSLTGPA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA NRLDLQ+MEKK SESFKEYAQRW+DM AEVQPPLTDKE+TSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAE TTEYGGIKKGTISKKKEGE+HAIGFPNSGKHKSIFG+RKYEQNF SYI+NVS+IPYNSYVPA TVSETPKPVNSNSPRP VQGQGSK NS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFDPIPMTYTELLP
Subjt:  DTWRFDPIPMTYTELLP

XP_008465589.1 PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo]3.5e-20085.61Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINNLGEQVSKILELLSMGKGK  VD  QSSNPIQDTDD IYPPGFTPYHMNVPQSQT QHYVPTNPLY  PPI          AKI+DMGQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NTPAKQKLDVLEERLR IEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAA+INNDKLLVHCFQDSLTGPA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA NRLDLQ+MEKK SESFKEYAQRW+DM  EVQPPL DKE+TSMFMNTLRAPFYERMIGNASTNFS+IIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAEA TEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFG+RKYEQNF SYI+NVSHIPYNSYVPA TVSE PK  NSNSPRP VQGQGSKTNS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFD IPMTYTELLP
Subjt:  DTWRFDPIPMTYTELLP

TrEMBL top hitse value%identityAlignment
A0A1S3CQP2 uncharacterized protein LOC1035032251.7e-20085.61Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINNLGEQVSKILELLSMGKGK  VD  QSSNPIQDTDD IYPPGFTPYHMNVPQSQT QHYVPTNPLY  PPI          AKI+DMGQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NTPAKQKLDVLEERLR IEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAA+INNDKLLVHCFQDSLTGPA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA NRLDLQ+MEKK SESFKEYAQRW+DM  EVQPPL DKE+TSMFMNTLRAPFYERMIGNASTNFS+IIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAEA TEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFG+RKYEQNF SYI+NVSHIPYNSYVPA TVSE PK  NSNSPRP VQGQGSKTNS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFD IPMTYTELLP
Subjt:  DTWRFDPIPMTYTELLP

A0A5A7T0H8 Uncharacterized protein2.1e-20386.57Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINNLGEQVSKILELLSMGKGK VVD  QSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYVPTNPLY  PPI          AKI+DM QNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NTPAKQKLDVLEERLR IE TDVYGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMA +INNDKLLVHCFQDSLT PA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA +RLDLQ++EKK SESFKEYAQRWRDM AEVQPPLTDKE+TSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFG+RKYEQNF SYI+NVSHIPYNSYVPA TVSETPKPVNSNSPRP VQGQGSKTNS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFDPIPMTYTELLP
Subjt:  DTWRFDPIPMTYTELLP

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein2.6e-20186.09Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINNLGEQVSKILELLSMGKGK VVD  QSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYVPTNPLY  PPI          AKI+DM QNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NTPAKQKLDVLEERLR IE TDVYGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMY RKMA +INNDKLLVHCFQDSLT PA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA + LDLQ+MEKK SESFKEYAQRWRDMAAEVQPPLTDKE+TSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAEATTEYG IKKGTISKKKEGEVHAIGFPNSGKHKSIFG+RKYEQNF SYI+NVSHIPYNSYVPA TVSETPKPVNSNSPRP VQGQGSKTNS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFDPIPMTYTE+LP
Subjt:  DTWRFDPIPMTYTELLP

A0A5A7V3W7 Retrotrans_gag domain-containing protein3.1e-20285.61Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINN+GEQVSKILELLSMGKGK  VD TQSSNPIQDTDDPIYPP FTPYHMNVPQSQTTQHY+PT+PLY  PPI          AKI+DMGQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NT AKQKLDVLEERLR IEGTDVYGNIDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMA +INNDKLLVHCFQDSLTGPA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA NRLDLQ+MEKK SESFKEYAQRW+DM AEVQPPLTDKE+TSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAE TTEYGGIKKGTISKKKEGE+HAIGFPNSGKHKSIFG+RKYEQNF SYI+NVS+IPYNSYVPA TVSETPKPVNSNSPRP VQGQGSK NS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFDPIPMTYTELLP
Subjt:  DTWRFDPIPMTYTELLP

A0A5D3CXD6 Retrotrans_gag domain-containing protein1.5e-20186.09Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE
        MDKMRQEINNLGEQVSKILELLSMGKGK  VD  QSSNPIQDTDD IYPPGFTPYHMNVPQSQTTQHYVPTNPLY  PPI          AKI+DMGQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPI----------AKIEDMGQNE

Query:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------
        NTPAKQKLDVLEERLR IEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAA+INNDKLLVHCFQDSLTGPA+        
Subjt:  NTPAKQKLDVLEERLRGIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPAT--------

Query:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY
                  DAFLK+YKHNIDMA NRLDLQ+MEKK SESFKEYAQRWRDM  EVQPPL DKE+TSMFMNTLRAPFYERMIGNASTNFS+IIVIGERIEY
Subjt:  ----------DAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRWRDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS
        GIKHGRLAEA TEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFG+RKYEQNF SYI+NVSHIPYNSYVPA TVSE PK  NSNSPRP VQGQGSKTNS
Subjt:  GIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYINNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNS

Query:  DTWRFDPIPMTYTELLP
        DTWRFD IPMTYTELLP
Subjt:  DTWRFDPIPMTYTELLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCGAAAATACTTGAATTACTTTCAATGGGGAAAGGAAAATTCGTTGTAGATATAACACAATCAAG
CAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAGGATTCACTCCATACCACATGAATGTTCCGCAGTCTCAAACCACTCAACACTATGTTCCTACGAATCCGC
TGTATGGTTTTCCACCCATTGCTAAAATTGAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGATTGCGAGGAATTGAAGGG
ACTGATGTCTATGGAAATATAGATGCAACACAATTGTGCTTGGTGCCAGACTTGATCATTCCAGCAAAGTTTAAAGTTCCTGAATTCGATAAATATGATGGATCAACGTG
TCCAAGGAGTCATCTTATAATGTACTGTAGAAAGATGGCGGCAAATATTAATAATGATAAATTGCTAGTCCATTGCTTCCAAGATAGCTTGACTGGTCCAGCTACTGATG
CATTTCTAAAGAAATACAAACACAACATTGATATGGCTCAAAACCGTTTAGACTTGCAACAGATGGAGAAGAAGCGTTCAGAAAGCTTTAAAGAATATGCTCAACGATGG
AGAGATATGGCTGCTGAGGTTCAGCCACCGTTAACAGACAAAGAAATTACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGTAATGCATC
AACAAATTTTTCTGATATTATTGTTATTGGCGAAAGAATTGAATATGGGATAAAACATGGGAGGTTAGCAGAGGCTACAACTGAATATGGTGGAATAAAGAAAGGAACAA
TATCCAAGAAGAAAGAAGGAGAGGTTCATGCAATTGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTAAGAGAAAATATGAGCAAAACTTTTCGTCATATATA
AACAATGTTTCTCATATCCCTTATAATAGCTATGTACCAGCCCCTACAGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCACGACCATTGGTACAAGGTCAAGG
TAGCAAAACCAATTCAGATACATGGCGGTTTGATCCAATTCCCATGACTTATACAGAGCTTTTACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCGAAAATACTTGAATTACTTTCAATGGGGAAAGGAAAATTCGTTGTAGATATAACACAATCAAG
CAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAGGATTCACTCCATACCACATGAATGTTCCGCAGTCTCAAACCACTCAACACTATGTTCCTACGAATCCGC
TGTATGGTTTTCCACCCATTGCTAAAATTGAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGATTGCGAGGAATTGAAGGG
ACTGATGTCTATGGAAATATAGATGCAACACAATTGTGCTTGGTGCCAGACTTGATCATTCCAGCAAAGTTTAAAGTTCCTGAATTCGATAAATATGATGGATCAACGTG
TCCAAGGAGTCATCTTATAATGTACTGTAGAAAGATGGCGGCAAATATTAATAATGATAAATTGCTAGTCCATTGCTTCCAAGATAGCTTGACTGGTCCAGCTACTGATG
CATTTCTAAAGAAATACAAACACAACATTGATATGGCTCAAAACCGTTTAGACTTGCAACAGATGGAGAAGAAGCGTTCAGAAAGCTTTAAAGAATATGCTCAACGATGG
AGAGATATGGCTGCTGAGGTTCAGCCACCGTTAACAGACAAAGAAATTACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGAGCGAATGATTGGTAATGCATC
AACAAATTTTTCTGATATTATTGTTATTGGCGAAAGAATTGAATATGGGATAAAACATGGGAGGTTAGCAGAGGCTACAACTGAATATGGTGGAATAAAGAAAGGAACAA
TATCCAAGAAGAAAGAAGGAGAGGTTCATGCAATTGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTAAGAGAAAATATGAGCAAAACTTTTCGTCATATATA
AACAATGTTTCTCATATCCCTTATAATAGCTATGTACCAGCCCCTACAGTCTCTGAAACTCCAAAACCCGTTAACTCAAATTCTCCACGACCATTGGTACAAGGTCAAGG
TAGCAAAACCAATTCAGATACATGGCGGTTTGATCCAATTCCCATGACTTATACAGAGCTTTTACCTTAA
Protein sequenceShow/hide protein sequence
MDKMRQEINNLGEQVSKILELLSMGKGKFVVDITQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYGFPPIAKIEDMGQNENTPAKQKLDVLEERLRGIEG
TDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAANINNDKLLVHCFQDSLTGPATDAFLKKYKHNIDMAQNRLDLQQMEKKRSESFKEYAQRW
RDMAAEVQPPLTDKEITSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGKRKYEQNFSSYI
NNVSHIPYNSYVPAPTVSETPKPVNSNSPRPLVQGQGSKTNSDTWRFDPIPMTYTELLP