| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 0.0e+00 | 44.62 | Show/hide |
Query: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV--RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D + K E WTK+ED+ +GNS+ LNALFN V+ NIF+LIN
Subjt: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV--RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
Query: TCKSAKAAWDILEI---------------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
TC AK AW+IL+I L ++FE L+M E+E I +F++ +L+IAN ALGE++ D KLVRK+LRSLP +F+MKVTAI+EA D+ M+
Subjt: TCKSAKAAWDILEI---------------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
Query: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERGKGTEASKSDKF----------GKGI
+DEL G + +D Y R+K H + + K K+ KGI
Subjt: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERGKGTEASKSDKF----------GKGI
Query: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISIC----TMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER---
+CH CEG+GHI EC T+LK+ +KG+ SD E ESD + AL I +D ++ T D+ ++ RK E ILQQ+ +
Subjt: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISIC----TMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER---
Query: -IQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGTEISRMS---------M
I DL E ++ I LK E+ + E + K +M G+ LD++L G+ A ++RGLGF + P + + MS
Subjt: -IQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGTEISRMS---------M
Query: KSLNKRTRRICYFCG---------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG
+ +KR + C++CG WY DSGC RHMTG +F ++ C V F DG
Subjt: KSLNKRTRRICYFCG---------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG
Query: GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKR
KGKIIG G + GLP L V L++GL ANLISISQLCD+ KS + ++ L C SK +E +WH+R
Subjt: GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKR
Query: LGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-----
G L + K+ A+ +P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR V VDDFSR+TW+K +
Subjt: LGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-----
Query: -----KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV
K SL +EK+ I RI++D+GREFEN EF +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV
Subjt: -----KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV
Query: ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE------
LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSRAYRV+N ++TVMESINV++DDL ++++++
Subjt: ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE------
Query: --------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF
D + + D T I K +P IIGD + + TR +E ++VSN C+ S +EP + AL+DE WI AMQEEL QF
Subjt: --------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF
Query: KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY
KRN+VWEL+P+P N+IGTKWIFKNK +EEG + R ++IRLLL AC +FKL+QMDVKS FLNGYL EEVY
Subjt: KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY
Query: VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMV
V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ + + +I QIYVDDI+FGG S+ EFEMS+V
Subjt: VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMV
Query: GELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSH
GELT+FL Q+KQ IF SQ +YAKN++ KFGM+ A KRTPA T+LK++KD G VD +LYRS+IGSLLYLTASRPDI +AVGVCARYQA+P+ SH
Subjt: GELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSH
Query: LHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRI
L KRILKY++GT +YGI Y + + LVG DADWAG DDRKSTSGGCF+LGNN+ + FSKKQN S SQL+WMKQML EY +
Subjt: LHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRI
Query: TQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
Q M LYCD +SAI+ISKNPVQHS TKHI+IRHH+ R+LV+ +I L+HV + Q+ADIFTK LD FE LR +G+C
Subjt: TQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
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| AAO73527.1 gag-pol polyprotein [Glycine max] | 0.0e+00 | 44.68 | Show/hide |
Query: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV--RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D + K E WTK+ED+ +GNS+ LNALFN V+ NIF+LIN
Subjt: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV--RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
Query: TCKSAKAAWDILEI---------------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
TC AK AW+IL+I L ++FE L+M E+E I +F++ +L+IAN ALGE++ D KLVRK+LRSLP +F+MKVTAI+EA D+ M+
Subjt: TCKSAKAAWDILEI---------------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
Query: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERGKGTEASKSDKF----------GKGI
+DEL G + +D Y R+K H + + K K+ KGI
Subjt: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERGKGTEASKSDKF----------GKGI
Query: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTED--AEDRKKTKDQEVILQQQER----I
+CH CEG+GHI EC T+LK+ +KG+ SD E ESD + AL I E + S + ++ A RK E ILQQ+ + I
Subjt: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTED--AEDRKKTKDQEVILQQQER----I
Query: QDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTER---------DTPGR---GTEISRM------SMKS
DL E ++ I LK E+ + E + K +M G+ LD++L G+ A ++RGLGF + P + GT +S+ + +
Subjt: QDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTER---------DTPGR---GTEISRM------SMKS
Query: LNKRTRRICYFCG-----------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG
+KR + C++CG WY DSGC RHMTG +F ++ C V F DG
Subjt: LNKRTRRICYFCG-----------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG
Query: GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKR
KGKIIG G + GLP L V L++GL ANLISISQLCD+ KS + ++ L C SK +E +WH+R
Subjt: GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKR
Query: LGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-----
G L + K+ A+ +P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR V VDDFSR+TW+ +
Subjt: LGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-----
Query: -----KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV
K SL +EK+ I RI++D+GREFEN F EF +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV
Subjt: -----KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV
Query: ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE------
LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSRAYRV+N ++TVMESINV++DDL ++++++
Subjt: ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE------
Query: --------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF
D + + D T I K +P IIGD + + TR +E ++VSN C+ S +EP + AL+DE WI AMQEEL QF
Subjt: --------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF
Query: KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY
KRN+VWEL+P+P N+IGTKWIFKNK +EEG + R ++IRLLL AC +FKL+QMDVKS FLNGYL EEVY
Subjt: KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY
Query: VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMV
V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ + + +I QIYVDDI+FGG S+ EFEMS+V
Subjt: VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMV
Query: GELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSH
GELT+FL Q+KQ IF SQ +YAKN++ KFGM+ A KRTPA T+LK++KD G VD +LYRS+IGSLLYLTASRPDI +AVGVCARYQA+P+ SH
Subjt: GELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSH
Query: LHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRI
L KRILKY++GT +YGI Y + + LVG DADWAG DDRKSTSGGCF+LGNN+ + FSKKQN S SQL+WMKQML EY +
Subjt: LHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRI
Query: TQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
Q M LYCD +SAI+ISKNPVQHS TKHI+IRHH+ R+LV+ +I L+HV + Q+ADIFTK LD FE LR +G+C
Subjt: TQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 0.0e+00 | 44.42 | Show/hide |
Query: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVR--KSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D + K E WTK+ED+ +GNS+ LNALFN V+ NIF+LIN
Subjt: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVR--KSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
Query: TCKSAKAAWDI---------------LEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
TC AK AW+I L++L ++FE L+M E+E I +F++ +L+IAN ALGE+M D KLVRK+LRSLP +F+MKVTAI+EA D+ M+
Subjt: TCKSAKAAWDI---------------LEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
Query: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERG------KGTE-ASKSDK---FGKGI
+DEL G + +D Y R+K H R KG+E KSD+ KGI
Subjt: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERG------KGTE-ASKSDK---FGKGI
Query: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQD
+C CEG+GHI+ EC T+LK+++KG+ SD+ + + D D + ++ + E++ T + + R+ E ILQQ+ + I +
Subjt: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQD
Query: LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGTEISRMS---------MKSLN
L E ++ I LK E+ + E + K +M G+ LD++L G++ ++RGLGF + P + + + MS + +
Subjt: LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGTEISRMS---------MKSLN
Query: KRTRRICYFCG-----------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGK
KR + C++CG WY DSGC RHMTG +F ++ C V F DG K
Subjt: KRTRRICYFCG-----------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGK
Query: GKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKRLG
GKI G G + GLP L V L++GL NLISISQLCD+ KS + ++ L C SK +E +WH+R G
Subjt: GKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKRLG
Query: QLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-------
L + K+ A+ +P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR V VDDFSR+TW+ +
Subjt: QLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-------
Query: ---KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVIL
K SL +EK+ I RI++D+GREFEN F EF +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV L
Subjt: ---KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVIL
Query: RSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------
R GT TT YE+WKGRKP VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSRAYRV+N ++TVMESINV++DDL ++++++
Subjt: RSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------
Query: ------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKR
D + + D P I K +P IIGD + + TR +E ++VSN C+ S +EP + AL+DE WI AMQEEL QFKR
Subjt: ------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKR
Query: NQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVA
N+VWEL+P+P N+IGTKWIFKNK +EEG + R ++IRLLL AC +FKL+QMDVKS FLNGYL EE YV
Subjt: NQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVA
Query: QPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGE
QPKGFVDP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ + + +I QIYVDDI+FGG S+ EFEMS+VGE
Subjt: QPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGE
Query: LTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLH
LT+FL Q+KQ IF SQ KYAKN++ KFGM+ A KRTPA T+LK++KD G VD +LYRS+IGSLLYLTASRPDI +AVGVCARYQA+P+ SHL+
Subjt: LTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLH
Query: CAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRITQ
KRILKY++GT +YGI Y + + LVG DADWAG DDRKSTSGGCF+LGNN+ + FSKKQN S SQL+WMKQML EY + Q
Subjt: CAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRITQ
Query: SSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
M LYCD +SAI+ISKNPVQHS TKHI+IRHH+ RELV+ +I LEHV + Q+ADIFTK LD FE LR +G+C
Subjt: SSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
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| KAA0059225.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0e+00 | 65.71 | Show/hide |
Query: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVRKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTC
MD IRE NSTSRP LLDG NYGYWKS+M+AFLMSL+MR +EDDA +GNSR LNAL NVV+PNIFKLINTC
Subjt: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVRKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTC
Query: KSAKAAWDILE----------------ILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKL
KSAKA WDILE ILTS+FEALQMGE ETI EFNV VLDIANESDALGEKM DSKLVRKVLRSLP KFNMKVTAI+EANDLSKMKL
Subjt: KSAKAAWDILE----------------ILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKL
Query: DELFG-------------------------------------------------QSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGH
DELFG Q RISDTSSSGH RKKEHERGK +ASKSDK+GKGIRCHECEGFGH
Subjt: DELFG-------------------------------------------------QSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGH
Query: IQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVT
IQ ECATYLKRKKKGMVAT SDEEDYSESDDEDLGMALIS+CTMNDEENVQTHDQ +S N T D +R K +DQEVILQQQERIQDLVEENQSFLSSIVT
Subjt: IQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVT
Query: LKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTP---------------------GRGTEISRMSMKSLNKRTRRIC----
LKEELA+TKHQFEELLKFARM T GTSKLDDILDQG RADDKRGL F ERDTP G+GTEI+ M K L C
Subjt: LKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTP---------------------GRGTEISRMSMKSLNKRTRRIC----
Query: --------------YFCGWYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSI
WYFDSGC RHMTGNADFFS+L ECKVG VVF DGGKGKIIGKGTIN GLPFLL+VRL+QGLAANLISISQLCD+ + VS
Subjt: --------------YFCGWYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSI
Query: KID-------------------------DAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIA
D DA+VTLCNLSKVEEA LWHKRLG LSG+TISKVTK DAII LPPL+F SLE CSEC GKQVKSVHKPVNI+
Subjt: KID-------------------------DAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIA
Query: STSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV--KPYSLNS---------KEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSA
STSHILELLHIDLMGPMQT+SLGRK VVCVDDFSRYTWIK + KP + + +EKNTGIG+IQTD+G EFENQHFAEF DNEGIFHEFSA
Subjt: STSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV--KPYSLNS---------KEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSA
Query: PLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGI
PL QQN V EALNTACHIHNRVILR GTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRR WDSKSD GI
Subjt: PLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGI
Query: FLGYSANSRAYRVYNQSSKTVMESINVIIDDLG----KEPNRN-----LDDEDDKLRVQLILQSG---------------------------------DL
FLGY ANSRAYRVYNQ SK VMESINVIIDDL + P R L R+ + S DL
Subjt: FLGYSANSRAYRVYNQSSKTVMESINVIIDDLG----KEPNRN-----LDDEDDKLRVQLILQSG---------------------------------DL
Query: IPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMD
IPPTH KN+PSSFII DIHS IITRKKERKDYAKMV+NVCYTS LEPTT+SAALSDEHWIL +QEELLQF+RNQVWEL+PKPPYANIIGTKWIFKNK D
Subjt: IPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMD
Query: EEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQA
EEGRVIR + IRLLLSYACF RFKLFQMDVKS FLNGYL EEVYVAQPKGFVDPVH+DHVYKLRKALY LKQA
Subjt: EEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQA
Query: PRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTS
PRAWYERLSTYLLQQGYQRGSADQTMFIYRQGT+FLIVQIYVD I+FG TS
Subjt: PRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTS
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| TYK07190.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0e+00 | 82.26 | Show/hide |
Query: MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKF
MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKLDELFG S +D +GHYRKKEHERGKGTEASKSDKF
Subjt: MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKF
Query: GKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQD
GKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQD
Subjt: GKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQD
Query: LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGC
LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTP ++ +S N+ T + +
Subjt: LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGC
Query: CRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRL
R + GNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRL
Subjt: CRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRL
Query: GQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKPYSLN
GQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKP +HVKPYSLN
Subjt: GQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKPYSLN
Query: SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
Subjt: SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
Query: LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPP
LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLG+ + +E L L D+
Subjt: LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPP
Query: T----HITKNNPSSFIIGDIHS-------------EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYA
+ H + + + H+ EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYA
Subjt: T----HITKNNPSSFIIGDIHS-------------EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYA
Query: NIIGTKWIFKNKMDEEGRVIRKT
NIIGTKWIFKNKMDEEGRVIRK+
Subjt: NIIGTKWIFKNKMDEEGRVIRKT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7V046 Gag-pol polyprotein | 0.0e+00 | 65.71 | Show/hide |
Query: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVRKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTC
MD IRE NSTSRP LLDG NYGYWKS+M+AFLMSL+MR +EDDA +GNSR LNAL NVV+PNIFKLINTC
Subjt: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVRKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLINTC
Query: KSAKAAWDILE----------------ILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKL
KSAKA WDILE ILTS+FEALQMGE ETI EFNV VLDIANESDALGEKM DSKLVRKVLRSLP KFNMKVTAI+EANDLSKMKL
Subjt: KSAKAAWDILE----------------ILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKL
Query: DELFG-------------------------------------------------QSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGH
DELFG Q RISDTSSSGH RKKEHERGK +ASKSDK+GKGIRCHECEGFGH
Subjt: DELFG-------------------------------------------------QSRISDTSSSGHYRKKEHERGKGTEASKSDKFGKGIRCHECEGFGH
Query: IQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVT
IQ ECATYLKRKKKGMVAT SDEEDYSESDDEDLGMALIS+CTMNDEENVQTHDQ +S N T D +R K +DQEVILQQQERIQDLVEENQSFLSSIVT
Subjt: IQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQDLVEENQSFLSSIVT
Query: LKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTP---------------------GRGTEISRMSMKSLNKRTRRIC----
LKEELA+TKHQFEELLKFARM T GTSKLDDILDQG RADDKRGL F ERDTP G+GTEI+ M K L C
Subjt: LKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTP---------------------GRGTEISRMSMKSLNKRTRRIC----
Query: --------------YFCGWYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSI
WYFDSGC RHMTGNADFFS+L ECKVG VVF DGGKGKIIGKGTIN GLPFLL+VRL+QGLAANLISISQLCD+ + VS
Subjt: --------------YFCGWYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSI
Query: KID-------------------------DAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIA
D DA+VTLCNLSKVEEA LWHKRLG LSG+TISKVTK DAII LPPL+F SLE CSEC GKQVKSVHKPVNI+
Subjt: KID-------------------------DAKVTLCNLSKVEEAGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIA
Query: STSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV--KPYSLNS---------KEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSA
STSHILELLHIDLMGPMQT+SLGRK VVCVDDFSRYTWIK + KP + + +EKNTGIG+IQTD+G EFENQHFAEF DNEGIFHEFSA
Subjt: STSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV--KPYSLNS---------KEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSA
Query: PLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGI
PL QQN V EALNTACHIHNRVILR GTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRR WDSKSD GI
Subjt: PLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGI
Query: FLGYSANSRAYRVYNQSSKTVMESINVIIDDLG----KEPNRN-----LDDEDDKLRVQLILQSG---------------------------------DL
FLGY ANSRAYRVYNQ SK VMESINVIIDDL + P R L R+ + S DL
Subjt: FLGYSANSRAYRVYNQSSKTVMESINVIIDDLG----KEPNRN-----LDDEDDKLRVQLILQSG---------------------------------DL
Query: IPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMD
IPPTH KN+PSSFII DIHS IITRKKERKDYAKMV+NVCYTS LEPTT+SAALSDEHWIL +QEELLQF+RNQVWEL+PKPPYANIIGTKWIFKNK D
Subjt: IPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMD
Query: EEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQA
EEGRVIR + IRLLLSYACF RFKLFQMDVKS FLNGYL EEVYVAQPKGFVDPVH+DHVYKLRKALY LKQA
Subjt: EEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQA
Query: PRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTS
PRAWYERLSTYLLQQGYQRGSADQTMFIYRQGT+FLIVQIYVD I+FG TS
Subjt: PRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTS
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| A0A5D3C778 Gag-pol polyprotein | 0.0e+00 | 82.26 | Show/hide |
Query: MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKF
MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKLDELFG S +D +GHYRKKEHERGKGTEASKSDKF
Subjt: MGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMKLDELFGQSRISDTSSSGHYRKKEHERGKGTEASKSDKF
Query: GKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQD
GKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQD
Subjt: GKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQERIQD
Query: LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGC
LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTP ++ +S N+ T + +
Subjt: LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERDTPGRGTEISRMSMKSLNKRTRRICYFCGWYFDSGC
Query: CRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRL
R + GNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRL
Subjt: CRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLCNLSKVEEAGLWHKRL
Query: GQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKPYSLN
GQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKP +HVKPYSLN
Subjt: GQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKPYSLN
Query: SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
Subjt: SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYE
Query: LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPP
LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLG+ + +E L L D+
Subjt: LWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPP
Query: T----HITKNNPSSFIIGDIHS-------------EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYA
+ H + + + H+ EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYA
Subjt: T----HITKNNPSSFIIGDIHS-------------EIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYA
Query: NIIGTKWIFKNKMDEEGRVIRKT
NIIGTKWIFKNKMDEEGRVIRK+
Subjt: NIIGTKWIFKNKMDEEGRVIRKT
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| Q84VH6 Gag-pol polyprotein | 0.0e+00 | 44.42 | Show/hide |
Query: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVR--KSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D + K E WTK+ED+ +GNS+ LNALFN V+ NIF+LIN
Subjt: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTVR--KSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
Query: TCKSAKAAWDI---------------LEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
TC AK AW+I L++L ++FE L+M E+E I +F++ +L+IAN ALGE+M D KLVRK+LRSLP +F+MKVTAI+EA D+ M+
Subjt: TCKSAKAAWDI---------------LEILTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
Query: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERG------KGTE-ASKSDK---FGKGI
+DEL G + +D Y R+K H R KG+E KSD+ KGI
Subjt: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERG------KGTE-ASKSDK---FGKGI
Query: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQD
+C CEG+GHI+ EC T+LK+++KG+ SD+ + + D D + ++ + E++ T + + R+ E ILQQ+ + I +
Subjt: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER----IQD
Query: LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGTEISRMS---------MKSLN
L E ++ I LK E+ + E + K +M G+ LD++L G++ ++RGLGF + P + + + MS + +
Subjt: LVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGTEISRMS---------MKSLN
Query: KRTRRICYFCG-----------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGK
KR + C++CG WY DSGC RHMTG +F ++ C V F DG K
Subjt: KRTRRICYFCG-----------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGK
Query: GKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKRLG
GKI G G + GLP L V L++GL NLISISQLCD+ KS + ++ L C SK +E +WH+R G
Subjt: GKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKRLG
Query: QLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-------
L + K+ A+ +P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR V VDDFSR+TW+ +
Subjt: QLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-------
Query: ---KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVIL
K SL +EK+ I RI++D+GREFEN F EF +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV L
Subjt: ---KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVIL
Query: RSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------
R GT TT YE+WKGRKP VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSRAYRV+N ++TVMESINV++DDL ++++++
Subjt: RSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE--------
Query: ------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKR
D + + D P I K +P IIGD + + TR +E ++VSN C+ S +EP + AL+DE WI AMQEEL QFKR
Subjt: ------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKR
Query: NQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVA
N+VWEL+P+P N+IGTKWIFKNK +EEG + R ++IRLLL AC +FKL+QMDVKS FLNGYL EE YV
Subjt: NQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVA
Query: QPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGE
QPKGFVDP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ + + +I QIYVDDI+FGG S+ EFEMS+VGE
Subjt: QPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMVGE
Query: LTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLH
LT+FL Q+KQ IF SQ KYAKN++ KFGM+ A KRTPA T+LK++KD G VD +LYRS+IGSLLYLTASRPDI +AVGVCARYQA+P+ SHL+
Subjt: LTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLH
Query: CAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRITQ
KRILKY++GT +YGI Y + + LVG DADWAG DDRKSTSGGCF+LGNN+ + FSKKQN S SQL+WMKQML EY + Q
Subjt: CAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRITQ
Query: SSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
M LYCD +SAI+ISKNPVQHS TKHI+IRHH+ RELV+ +I LEHV + Q+ADIFTK LD FE LR +G+C
Subjt: SSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
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| Q84VH8 Gag-pol polyprotein | 0.0e+00 | 44.68 | Show/hide |
Query: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV--RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D + K E WTK+ED+ +GNS+ LNALFN V+ NIF+LIN
Subjt: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV--RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
Query: TCKSAKAAWDILEI---------------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
TC AK AW+IL+I L ++FE L+M E+E I +F++ +L+IAN ALGE++ D KLVRK+LRSLP +F+MKVTAI+EA D+ M+
Subjt: TCKSAKAAWDILEI---------------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
Query: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERGKGTEASKSDKF----------GKGI
+DEL G + +D Y R+K H + + K K+ KGI
Subjt: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERGKGTEASKSDKF----------GKGI
Query: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTED--AEDRKKTKDQEVILQQQER----I
+CH CEG+GHI EC T+LK+ +KG+ SD E ESD + AL I E + S + ++ A RK E ILQQ+ + I
Subjt: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNSTED--AEDRKKTKDQEVILQQQER----I
Query: QDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTER---------DTPGR---GTEISRM------SMKS
DL E ++ I LK E+ + E + K +M G+ LD++L G+ A ++RGLGF + P + GT +S+ + +
Subjt: QDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTER---------DTPGR---GTEISRM------SMKS
Query: LNKRTRRICYFCG-----------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG
+KR + C++CG WY DSGC RHMTG +F ++ C V F DG
Subjt: LNKRTRRICYFCG-----------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG
Query: GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKR
KGKIIG G + GLP L V L++GL ANLISISQLCD+ KS + ++ L C SK +E +WH+R
Subjt: GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKR
Query: LGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-----
G L + K+ A+ +P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR V VDDFSR+TW+ +
Subjt: LGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-----
Query: -----KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV
K SL +EK+ I RI++D+GREFEN F EF +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV
Subjt: -----KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV
Query: ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE------
LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSRAYRV+N ++TVMESINV++DDL ++++++
Subjt: ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE------
Query: --------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF
D + + D T I K +P IIGD + + TR +E ++VSN C+ S +EP + AL+DE WI AMQEEL QF
Subjt: --------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF
Query: KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY
KRN+VWEL+P+P N+IGTKWIFKNK +EEG + R ++IRLLL AC +FKL+QMDVKS FLNGYL EEVY
Subjt: KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY
Query: VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMV
V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ + + +I QIYVDDI+FGG S+ EFEMS+V
Subjt: VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMV
Query: GELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSH
GELT+FL Q+KQ IF SQ +YAKN++ KFGM+ A KRTPA T+LK++KD G VD +LYRS+IGSLLYLTASRPDI +AVGVCARYQA+P+ SH
Subjt: GELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSH
Query: LHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRI
L KRILKY++GT +YGI Y + + LVG DADWAG DDRKSTSGGCF+LGNN+ + FSKKQN S SQL+WMKQML EY +
Subjt: LHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRI
Query: TQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
Q M LYCD +SAI+ISKNPVQHS TKHI+IRHH+ R+LV+ +I L+HV + Q+ADIFTK LD FE LR +G+C
Subjt: TQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
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| Q84VI4 Gag-pol polyprotein | 0.0e+00 | 44.62 | Show/hide |
Query: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV--RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
M+ +EG +RPP+LDG NY YWK++M AFL SL+ R+W+AVI GWE+P D + K E WTK+ED+ +GNS+ LNALFN V+ NIF+LIN
Subjt: MDSIREGNSTSRPPLLDGENYGYWKSQMEAFLMSLNMRSWRAVISGWEYPTEKDEACQTV--RKSELKWTKDEDDAPVGNSRTLNALFNVVNPNIFKLIN
Query: TCKSAKAAWDILEI---------------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
TC AK AW+IL+I L ++FE L+M E+E I +F++ +L+IAN ALGE++ D KLVRK+LRSLP +F+MKVTAI+EA D+ M+
Subjt: TCKSAKAAWDILEI---------------LTSQFEALQMGEDETITEFNVPVLDIANESDALGEKMYDSKLVRKVLRSLPFKFNMKVTAIKEANDLSKMK
Query: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERGKGTEASKSDKF----------GKGI
+DEL G + +D Y R+K H + + K K+ KGI
Subjt: LDELFGQSRI--------------------SDTSSSGHY----------------------------RKKEHERGKGTEASKSDKF----------GKGI
Query: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISIC----TMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER---
+CH CEG+GHI EC T+LK+ +KG+ SD E ESD + AL I +D ++ T D+ ++ RK E ILQQ+ +
Subjt: RCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISIC----TMNDEENVQTHDQPKSNNSTEDAEDRKKTKDQEVILQQQER---
Query: -IQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGTEISRMS---------M
I DL E ++ I LK E+ + E + K +M G+ LD++L G+ A ++RGLGF + P + + MS
Subjt: -IQDLVEENQSFLSSIVTLKEELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGFTERD---------TPGRGTEISRMS---------M
Query: KSLNKRTRRICYFCG---------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG
+ +KR + C++CG WY DSGC RHMTG +F ++ C V F DG
Subjt: KSLNKRTRRICYFCG---------------------------------------------------WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDG
Query: GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKR
KGKIIG G + GLP L V L++GL ANLISISQLCD+ KS + ++ L C SK +E +WH+R
Subjt: GKGKIIGKGTINRLGLPFLLNVRLLQGLAANLISISQLCDKAI-----KSVSIKIDDAKVTL-----------------------CNLSKVEEAGLWHKR
Query: LGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-----
G L + K+ A+ +P L C EC +GKQVK H+ + +TS +LELLH+DLMGPMQ +SLG KR V VDDFSR+TW+K +
Subjt: LGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRYTWIKHV-----
Query: -----KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV
K SL +EK+ I RI++D+GREFEN EF +EGI HEFSA + PQQN +VER+NRTLQE ARVM+HAK LP W EA+NTAC+IHNRV
Subjt: -----KPYSLN-SKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRV
Query: ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE------
LR GT TT YE+WKGRKP+VK+FHIFGS C+IL+DR+ RR D KSD GIFLGYS NSRAYRV+N ++TVMESINV++DDL ++++++
Subjt: ILRSGTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRAYRVYNQSSKTVMESINVIIDDLGKEPNRNLDDE------
Query: --------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF
D + + D T I K +P IIGD + + TR +E ++VSN C+ S +EP + AL+DE WI AMQEEL QF
Subjt: --------------DDKLRVQLILQSGDLIPPTHITKNNPSSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQF
Query: KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY
KRN+VWEL+P+P N+IGTKWIFKNK +EEG + R ++IRLLL AC +FKL+QMDVKS FLNGYL EEVY
Subjt: KRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVY
Query: VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMV
V QPKGF DP H DHVY+L+KALYGLKQAPRAWYERL+ +L QQGY++G D+T+F+ + + +I QIYVDDI+FGG S+ EFEMS+V
Subjt: VAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSS-----------GEFEMSMV
Query: GELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSH
GELT+FL Q+KQ IF SQ +YAKN++ KFGM+ A KRTPA T+LK++KD G VD +LYRS+IGSLLYLTASRPDI +AVGVCARYQA+P+ SH
Subjt: GELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSH
Query: LHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRI
L KRILKY++GT +YGI Y + + LVG DADWAG DDRKSTSGGCF+LGNN+ + FSKKQN S SQL+WMKQML EY +
Subjt: LHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN---------------SYYSQLLWMKQMLDEYRI
Query: TQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
Q M LYCD +SAI+ISKNPVQHS TKHI+IRHH+ R+LV+ +I L+HV + Q+ADIFTK LD FE LR +G+C
Subjt: TQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGVC
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.3e-86 | 26.31 | Show/hide |
Query: CGWYFDSGCCRHMTGNADFFSDLIECKVGL-VVFEDGGKGKIIGKGTINRLGLPF---LLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLC--
CG+ DSG H+ + ++D +E L + G+ K I RL L +V + A NL+S+ +L + +SI+ D + VT+
Subjt: CGWYFDSGCCRHMTGNADFFSDLIECKVGL-VVFEDGGKGKIIGKGTINRLGLPF---LLNVRLLQGLAANLISISQLCDKAIKSVSIKIDDAKVTLC--
Query: NLSKVEEAG------------------------LWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSL--ERCSECPVGKQVKSVHKPVNIASTSHI---L
L V+ +G LWH+R G +S + ++ + + D L+ L E C C GKQ + K + +HI L
Subjt: NLSKVEEAG------------------------LWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSL--ERCSECPVGKQVKSVHKPVNIASTSHI---L
Query: ELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRY--TWIKHVKP---------YSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQ
++H D+ GP+ +L K V+ VD F+ Y T++ K + + N + + D GRE+ + +F +GI + + P PQ
Subjt: ELLHIDLMGPMQTKSLGRKRCVVVCVDDFSRY--TWIKHVKP---------YSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQ
Query: NVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRS--GTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGY
N V ER RT+ E AR M+ L FW EA+ TA ++ NR+ R+ ++ T YE+W +KP +K+ +FG+T ++ ++ + +D KS IF+GY
Subjt: NVVVERRNRTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRS--GTTTTSYELWKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGY
Query: S---------------------------ANSRAYRVYNQSSKTVMESIN-------------------------VIIDDLGKEPNRNLDDEDDKL-----
NSRA + K ES N + D + N+N ++ K+
Subjt: S---------------------------ANSRAYRVYNQSSKTVMESIN-------------------------VIIDDLGKEPNRNLDDEDDKL-----
Query: --------RVQLILQSGDLIP-----------PTHITKN----NPSSFIIGDIHS----------------EIITRKKERKDYAKMVSNVCYTSSLEPTT
+Q + S + H+ ++ NP+ + EII R+ ER +S +SL
Subjt: --------RVQLILQSGDLIP-----------PTHITKN----NPSSFIIGDIHS----------------EIITRKKERKDYAKMVSNVCYTSSLEPTT
Query: ISAAL----------------SDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---------------------------
++A W A+ EL K N W + +P NI+ ++W+F K +E G IR
Subjt: ISAAL----------------SDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR---------------------------
Query: -KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQG--
+ R +LS K+ QMDVK+ FLNG L EE+Y+ P+G + D+V KL KA+YGLKQA R W+E L + + S D+ ++I +G
Subjt: -KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQG--
Query: TDFLIVQIYVDDIL-----------FGGTSSGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVD
+ + V +YVDD++ F +F M+ + E+ F+ +I+ + I+ SQ Y K ++SKF M+ + TP + + + E +
Subjt: TDFLIVQIYVDDIL-----------FGGTSSGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVD
Query: TNLYRSIIGSLLY-LTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTT--GTLVGNYDADWAGCTDDRKSTSGGCFFLGNNV
T RS+IG L+Y + +RPD+ AV + +RY + + KR+L+Y+ GT + + + + ++G D+DWAG DRKST+G F + +
Subjt: TNLYRSIIGSLLY-LTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTT--GTLVGNYDADWAGCTDDRKSTSGGCFFLGNNV
Query: TACF-SKKQNSYYS---------------QLLWMKQMLDEYRITQSSMI-LYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQ
C+ +K+QNS + + LW+K +L I + I +Y D ISI+ NP H KHI+I++HF RE V+ N+I LE++ + Q
Subjt: TACF-SKKQNSYYS---------------QLLWMKQMLDEYRITQSSMI-LYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQ
Query: LADIFTKPLDFATFEGLRASVGVCQ
LADIFTKPL A F LR +G+ Q
Subjt: LADIFTKPLDFATFEGLRASVGVCQ
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-97 | 27.58 | Show/hide |
Query: WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTI---NRLGLPFLL-NVRLLQGLAANLIS----------------------ISQLCD
W D+ H T D F + G V + KI G G I +G +L +VR + L NLIS S +
Subjt: WYFDSGCCRHMTGNADFFSDLIECKVGLVVFEDGGKGKIIGKGTI---NRLGLPFLL-NVRLLQGLAANLIS----------------------ISQLCD
Query: KAIKSVSIKIDDAKVTLCNLSKVEE---AGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLM
K + ++ +A++ L+ ++ LWHKR+G +S + + K I ++++ C C GKQ + V + +IL+L++ D+
Subjt: KAIKSVSIKIDDAKVTLCNLSKVEE---AGLWHKRLGQLSGSTISKVTKADAIIDLPPLSFSSLERCSECPVGKQVKSVHKPVNIASTSHILELLHIDLM
Query: GPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKP-----------YSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRN
GPM+ +S+G + V +DD SR W+ +K ++L +E + R+++D G E+ ++ F E+ + GI HE + P PQ N V ER N
Subjt: GPMQTKSLGRKRCVVVCVDDFSRYTWIKHVKP-----------YSLNSKEKNTGIGRIQTDYGREFENQHFAEFYDNEGIFHEFSAPLKPQQNVVVERRN
Query: RTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYEL----WKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRA
RT+ E R M+ LP FW EA+ TAC++ N RS + ++E+ W ++ + + +FG F ++ R D KS IF+GY
Subjt: RTLQEMARVMIHAKHLPIQFWVEALNTACHIHNRVILRSGTTTTSYEL----WKGRKPNVKYFHIFGSTCFILSDRDHRRNWDSKSDHGIFLGYSANSRA
Query: YRVYNQSSKTVMESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPPTHITKNNPSSFII--------GDIHSEIITRKKERKDYAKMVSN-----
YR+++ K V+ S +V+ + R D +K++ I+ + IP T NNP+S G+ E+I + ++ + + V +
Subjt: YRVYNQSSKTVMESINVIIDDLGKEPNRNLDDEDDKLRVQLILQSGDLIPPTHITKNNPSSFII--------GDIHSEIITRKKERKDYAKMVSN-----
Query: ------------------------VCYTSSLEPTTISAALS---DEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR-----
V + EP ++ LS + AMQEE+ ++N ++L+ P + KW+FK K D + +++R
Subjt: ------------------------VCYTSSLEPTTISAALS---DEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR-----
Query: -----------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYL
+IR +LS A ++ Q+DVK+ FL+G L EE+Y+ QP+GF + V KL K+LYGLKQAPR WY + +++
Subjt: -----------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYL
Query: LQQGYQRGSADQTMFIYR-QGTDFLIVQIYVDDILFGGTSSG-----------EFEMSMVGELTFFLRFQIKQENIG--IFFSQEKYAKNLISKFGMDKA
Q Y + +D ++ R +F+I+ +YVDD+L G G F+M +G L +I +E ++ SQEKY + ++ +F M A
Subjt: LQQGYQRGSADQTMFIYR-QGTDFLIVQIYVDDILFGGTSSG-----------EFEMSMVGELTFFLRFQIKQENIG--IFFSQEKYAKNLISKFGMDKA
Query: RSKRTPAATYLKMTKDTNGERVDTN------LYRSIIGSLLY-LTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVG
+ TP A +LK++K V+ Y S +GSL+Y + +RPDIA AVGV +R+ +P H K IL+Y+ GT + + + L G
Subjt: RSKRTPAATYLKMTKDTNGERVDTN------LYRSIIGSLLY-LTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVG
Query: NYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQNSYY---------------SQLLWMKQMLDEYRITQSSMILYCDYLSAISISKNPVQHSLTKHIN
DAD AG D+RKS++G F + SK Q +++W+K+ L E + Q ++YCD SAI +SKN + H+ TKHI+
Subjt: NYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQNSYY---------------SQLLWMKQMLDEYRITQSSMILYCDYLSAISISKNPVQHSLTKHIN
Query: IRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGV
+R+H+ RE+V+ +++ + + AD+ TK + FE + VG+
Subjt: IRHHFTRELVEANIIRLEHVQSAFQLADIFTKPLDFATFEGLRASVGV
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.9e-27 | 35.86 | Show/hide |
Query: IYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSI
+YVDDIL G+S S F M +G + +FL QIK G+F SQ KYA+ +++ GM + TP L + T + D + +RSI
Subjt: IYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSI
Query: IGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQ
+G+L YLT +RPDI++AV + + +P + KR+L+Y+ GT +G++ ++ + D+DWAGCT R+ST+G C FLG N+ + +K+Q
Subjt: IGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-77 | 35.14 | Show/hide |
Query: VCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPP-YANIIGTKWIFKNKMDEEG-------RVIRK---------------------TI
V + EP T AL DE W AM E+ N W+L+P PP + I+G +WIF K + +G R++ K +I
Subjt: VCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPP-YANIIGTKWIFKNKMDEEG-------RVIRK---------------------TI
Query: RLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIV
R++L A R + + Q+DV + FL G L ++VY++QP GF+D ++V KLRKALYGLKQAPRAWY L YLL G+ +D ++F+ ++G + +
Subjt: RLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGSADQTMFIYRQGTDFLIV
Query: QIYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRS
+YVDDIL G S F + EL +FL + K+ G+ SQ +Y +L+++ M A+ TP A K++ + + D YR
Subjt: QIYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRS
Query: IIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN
I+GSL YL +RPDI++AV +++ P HL KRIL+Y++GT N+GI+ T +L DADWAG DD ST+G +LG++ + SKKQ
Subjt: IIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQN
Query: SYY---------------SQLLWMKQMLDE--YRITQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPL
S++ W+ +L E R+T+ ++YCD + A + NPV HS KHI I +HF R V++ +R+ HV + QLAD TKPL
Subjt: SYY---------------SQLLWMKQMLDE--YRITQSSMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLEHVQSAFQLADIFTKPL
Query: DFATFEGLRASVGVCQRP
F+ + +GV + P
Subjt: DFATFEGLRASVGVCQRP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.2e-79 | 34.83 | Show/hide |
Query: TRKKE--RKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM-PKPPYANIIGTKWIFKNKMDEEG-------RVIRK------
TR K+ RK K ++ EP T A+ D+ W AM E+ N W+L+ P PP I+G +WIF K + +G R++ K
Subjt: TRKKE--RKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELM-PKPPYANIIGTKWIFKNKMDEEG-------RVIRK------
Query: ---------------TIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGS
+IR++L A R + + Q+DV + FL G L +EVY++QP GFVD D+V +LRKA+YGLKQAPRAWY L TYLL G+
Subjt: ---------------TIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFVDPVHQDHVYKLRKALYGLKQAPRAWYERLSTYLLQQGYQRGS
Query: ADQTMFIYRQGTDFLIVQIYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLK
+D ++F+ ++G + + +YVDDIL G S F + +L +FL + K+ G+ SQ +Y +L+++ M A+ TP AT K
Subjt: ADQTMFIYRQGTDFLIVQIYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLK
Query: MTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGG
+T + + D YR I+GSL YL +RPD+++AV ++Y P H + KR+L+Y++GT ++GI+ T +L DADWAG TDD ST+G
Subjt: MTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGG
Query: CFFLGNNVTACFSKKQNSYY---------------SQLLWMKQMLDEYRITQS-SMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLE
+LG++ + SKKQ S+L W+ +L E I S ++YCD + A + NPV HS KHI + +HF R V++ +R+
Subjt: CFFLGNNVTACFSKKQNSYY---------------SQLLWMKQMLDEYRITQS-SMILYCDYLSAISISKNPVQHSLTKHINIRHHFTRELVEANIIRLE
Query: HVQSAFQLADIFTKPLDFATFEGLRASVGVCQRP
HV + QLAD TKPL F+ +GV + P
Subjt: HVQSAFQLADIFTKPLDFATFEGLRASVGVCQRP
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G05360.1 Zinc knuckle (CCHC-type) family protein | 1.9e-06 | 30.57 | Show/hide |
Query: KFGKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNST----------EDAEDRKKTKDQ
K KG RC EC+GF H+ +ECA +K K+K + +SD E +SDD + L++ T + P S ++T D ++ D
Subjt: KFGKGIRCHECEGFGHIQTECATYLKRKKKGMVATLSDEEDYSESDDEDLGMALISICTMNDEENVQTHDQPKSNNST----------EDAEDRKKTKDQ
Query: EVILQQQERIQD----------LVEENQSFLSS--------IVTLK--EELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGF
++ + +E ++ +VEEN + TLK E E Q EE K RM NGT KL IL G+ DK GLGF
Subjt: EVILQQQERIQD----------LVEENQSFLSS--------IVTLK--EELAETKHQFEELLKFARMPTNGTSKLDDILDQGRRADDKRGLGF
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.7e-58 | 29.96 | Show/hide |
Query: SSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----
+S I DI S+ ++ +K Y + VC + EP+T + A W AM +E+ + WE+ PP IG KW++K K + +G + R
Subjt: SSFIIGDIHSEIITRKKERKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIR----
Query: ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFV----DPVHQDHVYKLRKALYGLKQAPRAWYER
+++L+L+ + F L Q+D+ + FLNG L EE+Y+ P G+ D + + V L+K++YGLKQA R W+ +
Subjt: ------------------------KTIRLLLSYACFRRFKLFQMDVKSVFLNGYLFEEVYVAQPKGFV----DPVHQDHVYKLRKALYGLKQAPRAWYER
Query: LSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSSGE-----------FEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMD
S L+ G+ + +D T F+ T FL V +YVDDI+ + F++ +G L +FL +I + GI Q KYA +L+ + G+
Subjt: LSTYLLQQGYQRGSADQTMFIYRQGTDFLIVQIYVDDILFGGTSSGE-----------FEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMD
Query: KARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDAD
+ P + + + G+ VD YR +IG L+YL +R DI+FAV +++ PR +H +IL YI GT G++Y+ L DA
Subjt: KARSKRTPAATYLKMTKDTNGERVDTNLYRSIIGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDAD
Query: WAGCTDDRKSTSGGCFFLGNNVTACFSKKQ---------------NSYYSQLLWMKQMLDEYRITQSS-MILYCDYLSAISISKNPVQHSLTKHINIRHH
+ C D R+ST+G C FLG ++ + SKKQ + +++W+ Q E ++ S +L+CD +AI I+ N V H TKHI H
Subjt: WAGCTDDRKSTSGGCFFLGNNVTACFSKKQ---------------NSYYSQLLWMKQMLDEYRITQSS-MILYCDYLSAISISKNPVQHSLTKHINIRHH
Query: FTRE
RE
Subjt: FTRE
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 2.9e-10 | 35.23 | Show/hide |
Query: LYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGC-----FFLG
+YLT +RPD+ FAV +++ + RT+ + ++L Y+ GT G++Y+ + L D+DWA C D R+S +G C +FLG
Subjt: LYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGC-----FFLG
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.4e-28 | 35.86 | Show/hide |
Query: IYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSI
+YVDDIL G+S S F M +G + +FL QIK G+F SQ KYA+ +++ GM + TP L + T + D + +RSI
Subjt: IYVDDILFGGTS-----------SGEFEMSMVGELTFFLRFQIKQENIGIFFSQEKYAKNLISKFGMDKARSKRTPAATYLKMTKDTNGERVDTNLYRSI
Query: IGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQ
+G+L YLT +RPDI++AV + + +P + KR+L+Y+ GT +G++ ++ + D+DWAGCT R+ST+G C FLG N+ + +K+Q
Subjt: IGSLLYLTASRPDIAFAVGVCARYQADPRTSHLHCAKRILKYISGTFNYGIWYTYDTTGTLVGNYDADWAGCTDDRKSTSGGCFFLGNNVTACFSKKQ
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.7e-10 | 38.71 | Show/hide |
Query: IITRKKE--RKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKTIRLL
++TR K K K + T EP ++ AL D W AMQEEL RN+ W L+P P NI+G KW+FK K+ +G + R RL+
Subjt: IITRKKE--RKDYAKMVSNVCYTSSLEPTTISAALSDEHWILAMQEELLQFKRNQVWELMPKPPYANIIGTKWIFKNKMDEEGRVIRKTIRLL
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