| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036866.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-98 | 39.97 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFR G
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
Query: -------------------------------------------------------------------------------------------------VLD
VLD
Subjt: -------------------------------------------------------------------------------------------------VLD
Query: MLDFDVILGMDWLAANHASIDCSRKE--------------------------------------------------------------------------
MLDFDVILGM+WLAANHASIDCS KE
Subjt: MLDFDVILGMDWLAANHASIDCSRKE--------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: -------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
VS+SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSN+PYLVEKRGLAEAGQ EFSLSSDGGLLFE
Subjt: VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
|
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| KAA0051309.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.4e-89 | 36.59 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
MIATEAARADKFVRGLRLDIQGLVRAFRPATHA+ALRLAVDLSLQERAN SK AGRG TSGQKRKAEQQP+PVPQRNFRPG
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
Query: -------------------------------------------------------------------------------------------------VLD
VLD
Subjt: -------------------------------------------------------------------------------------------------VLD
Query: MLDFDVILGMDWLAANHASIDCSRKE--------------------------------------------------------------------------
MLDFDVILGMDWLAANHASIDCSRKE
Subjt: MLDFDVILGMDWLAANHASIDCSRKE--------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
LKSHEQNYPTHDLELAAVVFA IWRHYLYGEKIQIF DHKSL
Subjt: ---------------------------------------------------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Query: KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY
KYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTM+LAQLTVQPTLRQRIIDAQSNDPY
Subjt: KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY
Query: LVEKRGLAEAGQTAEFSLSSDGGLLFE
LVEKRGLAEAGQ EFS+SSDGGLLFE
Subjt: LVEKRGLAEAGQTAEFSLSSDGGLLFE
|
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| KAA0051368.1 pol protein [Cucumis melo var. makuwa] | 4.9e-90 | 35.5 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP+RNFR G
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------VLDMLDFDVILGMDWLAANHASIDCSRKE-----------------------------------------------------
VLDMLDFDVILGMDWLAANHASIDCSRKE
Subjt: ------------------VLDMLDFDVILGMDWLAANHASIDCSRKE-----------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: -------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
Subjt: VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 4.1e-89 | 98.84 | Show/hide |
Query: KELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ
++LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ
Subjt: KELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ
Query: APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
Subjt: APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
|
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 4.9e-34 | 100 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG
MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG
|
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 2.6e-06 | 42.74 | Show/hide |
Query: TEAARADKFVRG---------LRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGVLDMLDFDVILGM
TEA +A V G L L G +F + RL V+ L + S +G S +K KA Q + VLDMLDFDVILGM
Subjt: TEAARADKFVRG---------LRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGVLDMLDFDVILGM
Query: DWLAANHASIDCSRKEL
DWLAANHASIDCSRKE+
Subjt: DWLAANHASIDCSRKEL
|
|
| XP_011658388.1 uncharacterized protein LOC105435984 [Cucumis sativus] | 4.0e-100 | 70.25 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGVLDMLDFDVILGMDWLAAN
M+ +A ADKFVRG ++ QG +RAFR DALR VD+S+ ER + KT S+S QKRK +QQP+ VPQRN R DM DF VILGMDWL AN
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGVLDMLDFDVILGMDWLAAN
Query: HASIDCSRKELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH
HASI+CSRKELKS +QNYPTHDLELA VVFALKIWRHYLYGEKIQIFT+HKSLKYFFT KELNMR RRWLELVKDYD EILYH GKANVV D LSRKVSH
Subjt: HASIDCSRKELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH
Query: SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLF
SAAL+T Q PLH+ LERAEIAV VG VT +LAQL+VQPTLRQ+I Q NDPYLV+K L E GQT EFS+S D ++F
Subjt: SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLF
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T407 Reverse transcriptase | 6.2e-99 | 39.97 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFR G
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
Query: -------------------------------------------------------------------------------------------------VLD
VLD
Subjt: -------------------------------------------------------------------------------------------------VLD
Query: MLDFDVILGMDWLAANHASIDCSRKE--------------------------------------------------------------------------
MLDFDVILGM+WLAANHASIDCS KE
Subjt: MLDFDVILGMDWLAANHASIDCSRKE--------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: -------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
VS+SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSN+PYLVEKRGLAEAGQ EFSLSSDGGLLFE
Subjt: VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
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| A0A5A7U7V9 Reverse transcriptase | 2.4e-90 | 35.5 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP+RNFR G
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------VLDMLDFDVILGMDWLAANHASIDCSRKE-----------------------------------------------------
VLDMLDFDVILGMDWLAANHASIDCSRKE
Subjt: ------------------VLDMLDFDVILGMDWLAANHASIDCSRKE-----------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: -------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
Subjt: VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
|
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| A0A5A7UD08 Reverse transcriptase | 1.2e-89 | 36.59 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
MIATEAARADKFVRGLRLDIQGLVRAFRPATHA+ALRLAVDLSLQERAN SK AGRG TSGQKRKAEQQP+PVPQRNFRPG
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
Query: -------------------------------------------------------------------------------------------------VLD
VLD
Subjt: -------------------------------------------------------------------------------------------------VLD
Query: MLDFDVILGMDWLAANHASIDCSRKE--------------------------------------------------------------------------
MLDFDVILGMDWLAANHASIDCSRKE
Subjt: MLDFDVILGMDWLAANHASIDCSRKE--------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
LKSHEQNYPTHDLELAAVVFA IWRHYLYGEKIQIF DHKSL
Subjt: ---------------------------------------------------------LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Query: KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY
KYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTM+LAQLTVQPTLRQRIIDAQSNDPY
Subjt: KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPY
Query: LVEKRGLAEAGQTAEFSLSSDGGLLFE
LVEKRGLAEAGQ EFS+SSDGGLLFE
Subjt: LVEKRGLAEAGQTAEFSLSSDGGLLFE
|
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| A0A5D3BPI1 Reverse transcriptase | 2.0e-89 | 98.84 | Show/hide |
Query: KELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ
++LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ
Subjt: KELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ
Query: APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
Subjt: APLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
|
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| A0A5D3BPI1 Reverse transcriptase | 2.4e-34 | 100 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG
MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG
|
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| A0A5D3BPI1 Reverse transcriptase | 1.2e-06 | 42.74 | Show/hide |
Query: TEAARADKFVRG---------LRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGVLDMLDFDVILGM
TEA +A V G L L G +F + RL V+ L + S +G S +K KA Q + VLDMLDFDVILGM
Subjt: TEAARADKFVRG---------LRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGVLDMLDFDVILGM
Query: DWLAANHASIDCSRKEL
DWLAANHASIDCSRKE+
Subjt: DWLAANHASIDCSRKEL
|
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| A0A5D3BPI1 Reverse transcriptase | 2.6e-89 | 35.96 | Show/hide |
Query: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
MIATEAARADKFVRGLRLDIQGLVRAFRPA HADALRLAVDLSLQERANSSK GRGSTS QK+KAEQQP+PVPQRNFRPG
Subjt: MIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPG-------------------
Query: ---------------------------------------------------------------------------------------------------V
V
Subjt: ---------------------------------------------------------------------------------------------------V
Query: LDMLDFDVILGMDWLAANHASIDCSRKE------------------------------------------------------------------------
LDMLDFDVILGMDWLAANHASIDCSRKE
Subjt: LDMLDFDVILGMDWLAANHASIDCSRKE------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------------LKSHEQNYPTHDLELAAVVFAL
LKSHEQNYPTHDLELAAVVFAL
Subjt: ------------------------------------------------------------------------------LKSHEQNYPTHDLELAAVVFAL
Query: KIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA
KIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA
Subjt: KIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLA
Query: QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
QLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAGQ EFS+SSDGGLLFE
Subjt: QLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.5e-14 | 41.67 | Show/hide |
Query: DVILGMDWLAANHASIDCSRKELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
DV LG H SR L HE NY T + EL A+V+A K +RHYL G +I +DH+ L + + K+ N + RW + ++D +I Y GK N
Subjt: DVILGMDWLAANHASIDCSRKELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Query: VVADALSR
VADALSR
Subjt: VVADALSR
|
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 7.7e-14 | 42.22 | Show/hide |
Query: KELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
+ LK EQNY T++ EL A+V+AL +++LYG + I IFTDH+ L + + N + +RW + ++ ++ Y PGK N VADALSR+
Subjt: KELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.9e-12 | 40 | Show/hide |
Query: LAANHASIDCSRKELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
L+ N I + L HE NY + EL A+V+A K +RHYL G + I +DH+ L++ KE + RW + +Y +I Y GK N VADALSR
Subjt: LAANHASIDCSRKELKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 5.3e-15 | 41.57 | Show/hide |
Query: KELKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
+ L E+NY T + E+ A++++L R YLYG I+++TDH+ L + + N + +RW +++Y+CE++Y PGK+NVVADALSR
Subjt: KELKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| Q9UR07 Transposon Tf2-11 polyprotein | 8.0e-11 | 30 | Show/hide |
Query: ELKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI
++ + NY D E+ A++ +LK WRHYL E +I TDH++L T + N R RW ++D++ EI Y PG AN +ADALSR ++
Subjt: ELKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI
Query: TRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
P+ +D E I + Q+++ + +++ +ND L+
Subjt: TRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
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